BLASTX nr result

ID: Coptis21_contig00009927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009927
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47164.1| unknown [Medicago truncatula]                          343   4e-92
ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifer...   343   4e-92
ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula] gi|...   343   6e-92
ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula] gi|...   342   7e-92
gb|ACU22978.1| unknown [Glycine max]                                  341   2e-91

>gb|AFK47164.1| unknown [Medicago truncatula]
          Length = 263

 Score =  343 bits (880), Expect = 4e-92
 Identities = 168/261 (64%), Positives = 199/261 (76%), Gaps = 8/261 (3%)
 Frame = +3

Query: 12  MTHTRCFTIAKPLIFGTAKATRPSKFLLNFAKKTYSTQIRMEDGQID--------NQRGA 167
           M +  C T  K L F          F +  + K    +IRME G +           RGA
Sbjct: 1   MIYGTCITALKSLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60

Query: 168 LVVLEGLDRSGKTSQCNRLLSFLEGQRFSVESWRFPDRKTGVGEMISSYLANKSQLDDRA 347
           L+VLEGLDRSGK+SQC+RL+S+LEG+  S E WRFPDR T VG+MIS+YL N SQLDD  
Sbjct: 61  LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120

Query: 348 IHLLFSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPD 527
           IHLLFSANRWEKRSLME+KLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCK+PE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPD 180

Query: 528 LVLYLDIPPEKAADRGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPMEDVEKQV 707
           LV YLDI P+KAA+RGGYG E+YE+LEFQQKV++HY++L D +W+I+DAC P+EDVEKQ+
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDTSWKIVDACQPIEDVEKQL 240

Query: 708 RELVLDCVTACRNGKPLSQLW 770
           +E+ L CV  C+ GKPLS LW
Sbjct: 241 QEIALACVKQCQQGKPLSSLW 261


>ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifera]
           gi|296090257|emb|CBI40076.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  343 bits (880), Expect = 4e-92
 Identities = 168/253 (66%), Positives = 201/253 (79%)
 Frame = +3

Query: 12  MTHTRCFTIAKPLIFGTAKATRPSKFLLNFAKKTYSTQIRMEDGQIDNQRGALVVLEGLD 191
           M+H   F + K L FG   A    KF  N         + ME+ +  + RGAL+VLEGLD
Sbjct: 1   MSHASHFRLPKLLNFGAGSARGLVKFGSNLRCNCSFRNMHMENNRNSDSRGALIVLEGLD 60

Query: 192 RSGKTSQCNRLLSFLEGQRFSVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSAN 371
           RSGK+SQ +R++S+LEG   S E WRFPDR T VG+MISSYLANKS LDD  IHLLFSAN
Sbjct: 61  RSGKSSQSSRMMSYLEGLGVSAELWRFPDRSTCVGQMISSYLANKSDLDDHTIHLLFSAN 120

Query: 372 RWEKRSLMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIP 551
           RWEKRSLME+KL++GTTLIVDRYSYSGVAFSSAKGLDI+WCKAPE+GLLAPDLV+YL+IP
Sbjct: 121 RWEKRSLMETKLRTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEMGLLAPDLVVYLNIP 180

Query: 552 PEKAADRGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPMEDVEKQVRELVLDCV 731
           PEKAA+RGGYG E+YEQL+FQ+KV+ HYQ+LRD +W+IIDA LP+EDVEK +R++VLDCV
Sbjct: 181 PEKAAERGGYGGERYEQLDFQRKVAHHYQVLRDPSWKIIDASLPIEDVEKPLRDMVLDCV 240

Query: 732 TACRNGKPLSQLW 770
             C+ GK L  LW
Sbjct: 241 KTCKKGKTLLNLW 253


>ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula]
           gi|355485782|gb|AES66985.1| Thymidylate kinase [Medicago
           truncatula]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92
 Identities = 168/261 (64%), Positives = 199/261 (76%), Gaps = 8/261 (3%)
 Frame = +3

Query: 12  MTHTRCFTIAKPLIFGTAKATRPSKFLLNFAKKTYSTQIRMEDGQID--------NQRGA 167
           M +  C T  K L F          F +  + K    +IRME G +           RGA
Sbjct: 1   MIYGTCITALKSLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60

Query: 168 LVVLEGLDRSGKTSQCNRLLSFLEGQRFSVESWRFPDRKTGVGEMISSYLANKSQLDDRA 347
           L+VLEGLDRSGK+SQC+RL+S+LEG+  S E WRFPDR T VG+MIS+YL N SQLDD  
Sbjct: 61  LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120

Query: 348 IHLLFSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPD 527
           IHLLFSANRWEKRSLME+KLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCK+PE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPD 180

Query: 528 LVLYLDIPPEKAADRGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPMEDVEKQV 707
           LV YLDI P+KAA+RGGYG E+YE+LEFQQKV++HY++L D +W+I+DAC P+EDVEKQ+
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKIVDACQPIEDVEKQL 240

Query: 708 RELVLDCVTACRNGKPLSQLW 770
           +E+ L CV  C+ GKPLS LW
Sbjct: 241 QEIALACVKQCQQGKPLSSLW 261


>ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula]
           gi|355480785|gb|AES61988.1| Thymidylate kinase [Medicago
           truncatula]
          Length = 263

 Score =  342 bits (878), Expect = 7e-92
 Identities = 168/261 (64%), Positives = 199/261 (76%), Gaps = 8/261 (3%)
 Frame = +3

Query: 12  MTHTRCFTIAKPLIFGTAKATRPSKFLLNFAKKTYSTQIRMEDGQID--------NQRGA 167
           M +  C T  K L F          F +  + K    +IRME G +           RGA
Sbjct: 1   MIYGTCITALKSLSFRALVFPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60

Query: 168 LVVLEGLDRSGKTSQCNRLLSFLEGQRFSVESWRFPDRKTGVGEMISSYLANKSQLDDRA 347
           L+VLEGLDRSGK+SQC+RL+S+LEG+  S E WRFPDR T VG+MIS+YL N SQLDD  
Sbjct: 61  LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120

Query: 348 IHLLFSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPD 527
           IHLLFSANRWEKRSLME+KLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPENGLLAPD 180

Query: 528 LVLYLDIPPEKAADRGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPMEDVEKQV 707
           LV YLDI P+KAA+RGGYG E+YE+LEFQQKV++HY++L D +W+I+DAC P++DVEKQ+
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKIVDACQPIQDVEKQL 240

Query: 708 RELVLDCVTACRNGKPLSQLW 770
           +E+ L CV  C+ GKPLS LW
Sbjct: 241 QEIALACVKQCQQGKPLSSLW 261


>gb|ACU22978.1| unknown [Glycine max]
          Length = 299

 Score =  341 bits (875), Expect = 2e-91
 Identities = 168/255 (65%), Positives = 199/255 (78%), Gaps = 7/255 (2%)
 Frame = +3

Query: 12  MTHTRCFTIAKPLIFGTAKATRPSKFLLNFAKKTYSTQIRME-------DGQIDNQRGAL 170
           M +  C T +K LIF      +P  F + F+ K + T+IRME       +G     RGAL
Sbjct: 1   MIYGTCVTASKSLIFRALVLQKPLNFQVKFSSKCFPTKIRMESNLNHSIEGNNKASRGAL 60

Query: 171 VVLEGLDRSGKTSQCNRLLSFLEGQRFSVESWRFPDRKTGVGEMISSYLANKSQLDDRAI 350
           VVLEGLDRSGK+SQC+RL+ FLEGQ  S E WRFPDR T VG+MIS+YL N SQLDD  I
Sbjct: 61  VVLEGLDRSGKSSQCSRLVPFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLDDHTI 120

Query: 351 HLLFSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDL 530
           HLLFSANRWEKRSLMESKLK+GTTLIVDRYSYSGVAFSSAKGLD +WCK PEIGL APD+
Sbjct: 121 HLLFSANRWEKRSLMESKLKTGTTLIVDRYSYSGVAFSSAKGLDFEWCKVPEIGLPAPDV 180

Query: 531 VLYLDIPPEKAADRGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPMEDVEKQVR 710
           V+YLDI PEKAA+RGGYG E+YE+LEFQ+KV+  Y++L D +W+ +DAC P+EDVEKQ++
Sbjct: 181 VVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVLHDVSWKDVDACQPIEDVEKQLQ 240

Query: 711 ELVLDCVTACRNGKP 755
           E+VLDCVT CR G P
Sbjct: 241 EIVLDCVTECRKGSP 255


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