BLASTX nr result

ID: Coptis21_contig00009922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009922
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus ...   132   3e-29
ref|XP_002523389.1| 60S ribosomal protein L9, putative [Ricinus ...   132   4e-29
ref|NP_192783.1| 60S ribosomal protein L9-2 [Arabidopsis thalian...   131   7e-29
gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]    130   9e-29
ref|XP_002874628.1| 60S ribosomal protein L9 [Arabidopsis lyrata...   130   9e-29

>ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus communis]
           gi|223541947|gb|EEF43493.1| 60S ribosomal protein L9,
           putative [Ricinus communis]
          Length = 194

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/75 (84%), Positives = 71/75 (94%)
 Frame = +3

Query: 6   MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKV 185
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKL RNFKHLNLDFQLIK+ E GKR+LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLTRNFKHLNLDFQLIKDEETGKRKLKI 60

Query: 186 DSWFGSRKTSASIRT 230
           ++WFGSRKTSA+IRT
Sbjct: 61  EAWFGSRKTSAAIRT 75


>ref|XP_002523389.1| 60S ribosomal protein L9, putative [Ricinus communis]
           gi|223537339|gb|EEF38968.1| 60S ribosomal protein L9,
           putative [Ricinus communis]
          Length = 194

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/75 (84%), Positives = 70/75 (93%)
 Frame = +3

Query: 6   MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKV 185
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKL RNFKHLNLDFQLIK  E GKR+LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLTRNFKHLNLDFQLIKEEETGKRKLKI 60

Query: 186 DSWFGSRKTSASIRT 230
           ++WFGSRKTSA+IRT
Sbjct: 61  EAWFGSRKTSAAIRT 75


>ref|NP_192783.1| 60S ribosomal protein L9-2 [Arabidopsis thaliana]
           gi|75314149|sp|Q9SZX9.1|RL92_ARATH RecName: Full=60S
           ribosomal protein L9-2 gi|4539405|emb|CAB40038.1|
           putative ribosomal protein L9, cytosolic [Arabidopsis
           thaliana] gi|7267742|emb|CAB78168.1| putative ribosomal
           protein L9, cytosolic [Arabidopsis thaliana]
           gi|17529050|gb|AAL38735.1| putative ribosomal protein L9
           [Arabidopsis thaliana] gi|21436441|gb|AAM51421.1|
           putative ribosomal protein L9 [Arabidopsis thaliana]
           gi|21554221|gb|AAM63297.1| putative ribosomal protein
           L9, cytosolic [Arabidopsis thaliana]
           gi|332657484|gb|AEE82884.1| 60S ribosomal protein L9-2
           [Arabidopsis thaliana]
          Length = 194

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/75 (85%), Positives = 70/75 (93%)
 Frame = +3

Query: 6   MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKV 185
           MKTILSSETMDIPDGV IKVNAK+I VEGP+GKL R+FKHLNLDFQLIK++  GKRQLK+
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 186 DSWFGSRKTSASIRT 230
           DSWFGSRKTSASIRT
Sbjct: 61  DSWFGSRKTSASIRT 75


>gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]
          Length = 194

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/75 (82%), Positives = 71/75 (94%)
 Frame = +3

Query: 6   MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKV 185
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKLVRNFKHLNLDFQLI + + GK++LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 186 DSWFGSRKTSASIRT 230
           D+WFGSRKTSA+IRT
Sbjct: 61  DAWFGSRKTSAAIRT 75


>ref|XP_002874628.1| 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata]
           gi|297320465|gb|EFH50887.1| 60S ribosomal protein L9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/75 (85%), Positives = 69/75 (92%)
 Frame = +3

Query: 6   MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKV 185
           MKTILSSETMDIPDGV IKVNAK+I VEGP+GKL R+FKHLNLDFQLIK+   GKRQLK+
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDEVTGKRQLKI 60

Query: 186 DSWFGSRKTSASIRT 230
           DSWFGSRKTSASIRT
Sbjct: 61  DSWFGSRKTSASIRT 75


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