BLASTX nr result

ID: Coptis21_contig00009902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009902
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251...   260   3e-67
ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...   260   4e-67
gb|AAM66973.1| unknown [Arabidopsis thaliana]                         230   4e-58
ref|NP_566307.1| YGGT family protein [Arabidopsis thaliana] gi|6...   226   5e-57
ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subs...   226   9e-57

>ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera]
           gi|296089606|emb|CBI39425.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  260 bits (665), Expect = 3e-67
 Identities = 146/251 (58%), Positives = 173/251 (68%), Gaps = 11/251 (4%)
 Frame = -3

Query: 994 SSLITTSTFILHNPNLTK--------PSFHNRNLSISRTNLSFPKKTHSFNPLNPLLKLH 839
           +SL+ + T +L  PN T         PSFH     +S    S PK            KL 
Sbjct: 2   ASLMASQTLLLRTPNPTLHAPHCTPLPSFH-----VSLPTFSPPKSHRLRLRFRRAAKLA 56

Query: 838 VSSSTTTPHSLRPTPSSSKTNNPFSPNLSNSTRTLATIFALGITLSKVFSQAIKNLSLKI 659
           +S+STTTP              PF+    +STRT++ I A  + +SKVF   I+++ L +
Sbjct: 57  ISASTTTP------------TTPFT----DSTRTVSAILASALAVSKVFIAKIQDIFLNL 100

Query: 658 CR---SPTSEEVLALQKLQGSLVCTMGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIY 488
            +   +P  EE+ A++ L+ S+VC +GPLFFAA RDRPSG LNTPLTVVAAGM+KWLDIY
Sbjct: 101 KQIDFTPNPEELAAIRDLRSSVVCAVGPLFFAAARDRPSGYLNTPLTVVAAGMAKWLDIY 160

Query: 487 SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLG 308
           SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLG
Sbjct: 161 SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLG 220

Query: 307 TLGSILNNSRG 275
           TLGSILNNSRG
Sbjct: 221 TLGSILNNSRG 231


>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  260 bits (664), Expect = 4e-67
 Identities = 145/251 (57%), Positives = 178/251 (70%), Gaps = 9/251 (3%)
 Frame = -3

Query: 1000 MASSLITTSTFILHNPNLTKPSFHNRNLSISRTN---LSFPKKTHSFNPLNPLLKLHVSS 830
            MA  L + +  +L  P L   S  +R L ++ T    L  P +    NPL+  LK    S
Sbjct: 1    MAMMLSSQTGAVLRAPFLPSHSNLSRRLPLTTTTTTTLCLPSQ----NPLSLALKFPKPS 56

Query: 829  --STTTP----HSLRPTPSSSKTNNPFSPNLSNSTRTLATIFALGITLSKVFSQAIKNLS 668
              ST TP    H +  +P S++      P L  STRT+ATI  L ++LS++F  +I+   
Sbjct: 57   LSSTITPKQRIHRVHLSPQSTQIPTESQPQLIGSTRTVATILTLALSLSRIFVTSIQKFV 116

Query: 667  LKICRSPTSEEVLALQKLQGSLVCTMGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIY 488
            L     PT ++++A++ LQ +LV ++GP FFAAL+DRP+G LNTPLTVVAAG++KWLDIY
Sbjct: 117  LSHNLFPTPDQLVAIRALQSNLVHSVGPFFFAALKDRPTGYLNTPLTVVAAGLAKWLDIY 176

Query: 487  SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLG 308
            SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLG
Sbjct: 177  SGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLG 236

Query: 307  TLGSILNNSRG 275
            TLGSILN+SRG
Sbjct: 237  TLGSILNSSRG 247


>gb|AAM66973.1| unknown [Arabidopsis thaliana]
          Length = 234

 Score =  230 bits (587), Expect = 4e-58
 Identities = 137/246 (55%), Positives = 163/246 (66%), Gaps = 9/246 (3%)
 Frame = -3

Query: 985 ITTSTFILHNPNLTKPSFHNRNLSISRTNLSFPKKTHSFNPLNPLLKLHVSSSTTTPHSL 806
           + +  F+L   ++T P FH           + P     F PLNP   L + +    P S+
Sbjct: 9   LRSPVFLLPPSSVTSPRFHGFT--------NQPPPARLFFPLNPFPSLSIQN----PKSI 56

Query: 805 RPTPSSSKTNNPF---------SPNLSNSTRTLATIFALGITLSKVFSQAIKNLSLKICR 653
           R + S+S    P          S  L+ STR+LAT+ AL I +++V +Q    LSL I  
Sbjct: 57  RISASASPITTPILQTEKSTARSSTLTGSTRSLATLAALAIAVTRVLAQ---KLSLAI-- 111

Query: 652 SPTSEEVLALQKLQGSLVCTMGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLM 473
             TS  V+A   L+ SL  T GP+FFA+LRDRP G LNTPLTVVA G+ KWLDIYSGVLM
Sbjct: 112 -QTSSPVIA-DGLRFSL-STAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGVLM 168

Query: 472 VRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSI 293
           VRVLLSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSI
Sbjct: 169 VRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSI 228

Query: 292 LNNSRG 275
           ++ S G
Sbjct: 229 VHGSTG 234


>ref|NP_566307.1| YGGT family protein [Arabidopsis thaliana]
           gi|6041841|gb|AAF02150.1|AC009853_10 unknown protein
           [Arabidopsis thaliana] gi|20466762|gb|AAM20698.1|
           unknown protein [Arabidopsis thaliana]
           gi|30023676|gb|AAP13371.1| At3g07430 [Arabidopsis
           thaliana] gi|332641021|gb|AEE74542.1| YGGT family
           protein [Arabidopsis thaliana]
          Length = 232

 Score =  226 bits (577), Expect = 5e-57
 Identities = 135/233 (57%), Positives = 156/233 (66%), Gaps = 9/233 (3%)
 Frame = -3

Query: 946 TKPSFHNRNLSISRTNLSFPKKTHSFNPLNPLLKLHVSSSTTTPHSLRPTPSSSKTNNPF 767
           T P FH           + P     F PLNP   L + +    P S+R + S+S    P 
Sbjct: 20  TSPRFHGFT--------NQPPPARLFFPLNPFPSLSIQN----PKSIRISASASPITTPI 67

Query: 766 ---------SPNLSNSTRTLATIFALGITLSKVFSQAIKNLSLKICRSPTSEEVLALQKL 614
                    S  L+ STR+LAT+ AL I +++V +Q    LSL I    TS  V+A   L
Sbjct: 68  LQTEKSTARSSTLTGSTRSLATLAALAIAVTRVLAQ---KLSLAI---QTSSPVIA-DGL 120

Query: 613 QGSLVCTMGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPW 434
           + SL  T GP+FFA+LRDRP G LNTPLTVVA G+ KWLDIYSGVLMVRVLLSWFPNIPW
Sbjct: 121 RFSL-STAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGVLMVRVLLSWFPNIPW 179

Query: 433 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRG 275
           +RQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSI++ S G
Sbjct: 180 ERQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSIVHGSTG 232


>ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313311|gb|EFH43734.1| YGGT family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 210

 Score =  226 bits (575), Expect = 9e-57
 Identities = 143/243 (58%), Positives = 162/243 (66%), Gaps = 6/243 (2%)
 Frame = -3

Query: 988 LITTSTFILHNPNLTKPSFHNRNLSISRTNLSFPKKTHSFNPLNPLLKLH-----VSSST 824
           ++T    IL NP L  P        I R  LS P+K  SFN     L LH     VSS+ 
Sbjct: 1   MVTLRASILANPRLPPP--------ILRPRLSLPRKP-SFN-----LSLHNPRTIVSSAV 46

Query: 823 TTPHSLRPTPSSSKTNNPFSPNLSNSTRTLATIFALGITLSKVFSQAIKNLSLKICR-SP 647
           T   SL P  S   T  P     S+STR++ T+  L   ++K     I+ LS+ I   SP
Sbjct: 47  T---SLSPVLS---TKPPSQFPFSDSTRSITTLALLAGVVTK---SLIQKLSVAIVNISP 97

Query: 646 TSEEVLALQKLQGSLVCTMGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVR 467
                    ++Q S + T  PLFFA+LRDRP+G LNTPLTVVAAG+SKWLDIYSGVLMVR
Sbjct: 98  ---------QIQAS-IRTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVR 147

Query: 466 VLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILN 287
           VLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSILN
Sbjct: 148 VLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILN 207

Query: 286 NSR 278
           NSR
Sbjct: 208 NSR 210


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