BLASTX nr result
ID: Coptis21_contig00009878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009878
(2080 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso... 478 e-132
ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putativ... 476 e-132
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2... 470 e-130
ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|2... 467 e-129
ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779... 449 e-123
>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
gi|297741413|emb|CBI32544.3| unnamed protein product
[Vitis vinifera]
Length = 529
Score = 478 bits (1231), Expect = e-132
Identities = 284/511 (55%), Positives = 334/511 (65%), Gaps = 22/511 (4%)
Frame = +3
Query: 150 FLTGQKLTFISNNKSYYPSARKLEVSHFRAQASESAGASAKSISVTTDAVNQDIGSKDEN 329
FL GQ L S+ + P +RKL V FRAQA+ G + S S T A+ KDE+
Sbjct: 28 FLCGQVLRLPSSRRC--PDSRKLTVLEFRAQAT---GTTKFSFS-TIGAIQDKADLKDED 81
Query: 330 LVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI-----SDGASAV 494
L FVAGATG+VGSRTVRELLKLGFRVRAGVR+AQ+AE L+QSVKQ+ + S+G V
Sbjct: 82 LAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEGTQPV 141
Query: 495 EKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATV 671
EKLEIVECDLE+ D+I PA+ NASVV+CCIGASEKEVFD+TGPYRIDY ATKNLIDAATV
Sbjct: 142 EKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATKNLIDAATV 201
Query: 672 AGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPT 851
A V+HFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVRPGGMERPT
Sbjct: 202 AKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVRPGGMERPT 261
Query: 852 DAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFG 1031
DAYKETHN++LS+EDTLFGGQVSNLQVAEL+AFM KNR SYCKVVEVIAETTAPL+PFG
Sbjct: 262 DAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPFG 321
Query: 1032 ELLSKIPSQWVDRSTVKDSSIKEEEVKPVSS-------FAEDXXXXXXXXXXXXXXYSAY 1190
ELL+KIPSQ VD S + + PV S + Y Y
Sbjct: 322 ELLAKIPSQRVDVSPKESDAADGPAPVPVVSGPPPSTPIEKGPPQGKATAMSPLSPYIVY 381
Query: 1191 DDLKXXXXXXXXXXXXXXNGHVIVVQAV-SEPAIAASQIDVSALTTEARSSTVKLHDTRP 1367
+DLK V + +EP S ++ + + + TRP
Sbjct: 382 EDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKEAIQEEAKKTRP 441
Query: 1368 LSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNIT-EETPTKVLAEVP 1544
LSPY VY+DLK SAP V+ T S+ NI+ T A++P
Sbjct: 442 LSPYIVYDDLKPPTSPSP--SAP----TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIP 495
Query: 1545 TPKTSY-------LSPYPVYDELKPPTSPSP 1616
+ + LSP+ +Y++LKPPTSPSP
Sbjct: 496 KDEQHHVQAKPRPLSPFTMYEDLKPPTSPSP 526
Score = 73.2 bits (178), Expect = 3e-10
Identities = 52/123 (42%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = +3
Query: 1365 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYS--NITEETPTKVLAE 1538
PLSPY VYEDLK P A P + +P+ S ++ E T + E
Sbjct: 374 PLSPYIVYEDLKPPTSPTP---TPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKE 430
Query: 1539 V---PTPKTSYLSPYPVYDELKPPTSPSPYAPKVSLLSTSTTEAGSLSSPKQDSHTGTRT 1709
KT LSPY VYD+LKPPTSPSP AP VSL ST E GS K D+ +G T
Sbjct: 431 AIQEEAKKTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGS----KIDNISGNNT 486
Query: 1710 *TP 1718
P
Sbjct: 487 AQP 489
>ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223541766|gb|EEF43314.1| NAD dependent
epimerase/dehydratase, putative [Ricinus communis]
Length = 584
Score = 476 bits (1225), Expect(2) = e-132
Identities = 281/529 (53%), Positives = 346/529 (65%), Gaps = 18/529 (3%)
Frame = +3
Query: 147 TFLTGQKLTFISNNKSYYPSARKLEVSHFRAQASESAGASAKSISVTTDAVNQDIGSKDE 326
TFL GQ + F S +K YP ARK+ +AQAS S+ +I +A+ ++ KD+
Sbjct: 27 TFLHGQLIRFSSFSK--YPHARKIRTFGIKAQASGVTKFSSGAI----EAIPKETDIKDD 80
Query: 327 NLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAVEKL 503
NL FVAGATG+VGSRTVRELLKLGF+VRAGVRSAQRA+TLVQSVKQ+ + +GA +EK
Sbjct: 81 NLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGAQPIEKF 140
Query: 504 EIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATVAGV 680
EI+ECDL++ + I A+ NAS+V+CCIGA EKEVFD TGPYRIDYQAT+NLIDAATVA V
Sbjct: 141 EIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDAATVAKV 200
Query: 681 DHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAY 860
HFI+++SLGTNK+GFPAAILNLFWGVL WKRKAEEALIASG+PYTIVRPGGMERPTDAY
Sbjct: 201 KHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGMERPTDAY 260
Query: 861 KETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFGELL 1040
KETHN++LS+EDTLFGGQVSNLQVAELMA M KN DLSYCKVVEVIAETTAPL+ +LL
Sbjct: 261 KETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLTTMDKLL 320
Query: 1041 SKIPSQWV---------DRSTVKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXXXXYSAYD 1193
++IPSQ + + + E +P S+ ++ Y+AYD
Sbjct: 321 TRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEPEQPKATVSRPLSPYTAYD 380
Query: 1194 DLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTT---EARSSTVKLHDTR 1364
DLK N V AV++P +Q S L + E++ +TV+
Sbjct: 381 DLK-PPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQTSSSGLASAIPESKPATVEAKIAG 439
Query: 1365 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITEETPTKVLAEVP 1544
PLSPY Y DLK S + A T + S+ N AE P
Sbjct: 440 PLSPYAAYPDLKPPTSPSPKPSGSKE-IPSGASSTEKVESSATGDNDVATITANNDAENP 498
Query: 1545 TPK-TSYLSPYPVYDELKPPTSPSPYAPKVSLLSTSTTE---AGSLSSP 1679
P+ +S SP+ VYD+LKPPTSPSP AP S+ +ST E AG+ + P
Sbjct: 499 PPEFSSGHSPFLVYDDLKPPTSPSPIAPVGSVPPSSTNEVPKAGNSAPP 547
Score = 23.5 bits (49), Expect(2) = e-132
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 1654 QKLDPCHLPSKTVTQVRGLKPPCSPVPS 1737
Q +P P T +KPP SP P+
Sbjct: 555 QNAEPKPRPLSPYTMYEDMKPPTSPSPA 582
>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
predicted protein [Populus trichocarpa]
Length = 564
Score = 470 bits (1210), Expect(2) = e-130
Identities = 281/519 (54%), Positives = 340/519 (65%), Gaps = 16/519 (3%)
Frame = +3
Query: 159 GQKLTFISNNKSYYPSARKLEVSHFRAQASESAGASAKSISVTTDAVNQDIGSKDENLVF 338
GQ L F N S + +RKL++ +AQAS +A+++++ +KDENL F
Sbjct: 31 GQFLKF--PNLSKFAHSRKLKILDIKAQAS-------------VEAISKEMETKDENLAF 75
Query: 339 VAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAVEKLEIVE 515
VAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE L QSVK++ + +G+ VE+LE VE
Sbjct: 76 VAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALAQSVKEMKLDVEGSQPVERLETVE 135
Query: 516 CDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATVAGVDHFI 692
CDLE+ ++I PA+ NASVV+CCIGASEKEVFDVTGP RIDY+ATKNL+DAATVA VDHFI
Sbjct: 136 CDLEKPNQIGPALGNASVVLCCIGASEKEVFDVTGPCRIDYRATKNLVDAATVAKVDHFI 195
Query: 693 LLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETH 872
+++SLGTNK GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPGGMERPTDAYKETH
Sbjct: 196 MVSSLGTNKFGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPGGMERPTDAYKETH 255
Query: 873 NVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFGELLSKIP 1052
N+++S+EDTLFGGQVSNLQVAE MAFM KNR LSYCKVVEVIAETTAPL+P ELL+KIP
Sbjct: 256 NLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKVVEVIAETTAPLTPMDELLAKIP 315
Query: 1053 SQWVD---------RSTVKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXXXXYSAYDDLKX 1205
SQ V+ +V ++ E P S + Y+AY+DLK
Sbjct: 316 SQRVEPKKSDAAELPKSVPPKIVEPEAPSPPSQ--REPAQAKAVVTRPLSPYTAYEDLKP 373
Query: 1206 XXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTVKLHDTRPLSPYFV 1385
+V V+AVS ++ E + + V+ RPLSPY
Sbjct: 374 PTSPIPTQPSGKKE-NVNSVEAVSMLDTPDPSPASASGIAETKPAPVETKTARPLSPYVA 432
Query: 1386 YEDLKXXXXXXXXFSAPRRGFVVAAQPT-----NEAVPSSEYSNITEETPTKVLAEVPTP 1550
Y+DLK +AP G V P N A P++ N E P P P
Sbjct: 433 YDDLKPPTSPSP--TAP-VGLVAITAPAVPKTGNSAPPTAAIDNQHHEEPN------PRP 483
Query: 1551 KTSYLSPYPVYDELKPPTSPSPYAPKVSLLSTSTTEAGS 1667
LSPYP+YD+LKPPTSPSP AP + +TS+ A S
Sbjct: 484 ----LSPYPIYDDLKPPTSPSPTAPVGLVATTSSINAVS 518
Score = 23.5 bits (49), Expect(2) = e-130
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 1663 DPCHLPSKTVTQVRGLKPPCSPVPSPK 1743
+P P LKPP SP PS K
Sbjct: 537 EPNPRPLSPYPMYEDLKPPASPTPSLK 563
>ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 467 bits (1201), Expect = e-129
Identities = 274/496 (55%), Positives = 334/496 (67%), Gaps = 10/496 (2%)
Frame = +3
Query: 159 GQKLTFISNNKSYYPSARKLEVSHFRAQASESAGASAKSISVTTDAVNQDIGSKDENLVF 338
GQ L F NK +P +RKL++ +AQAS +AK S +A ++++ +KDENL F
Sbjct: 31 GQLLKFPHFNK--FPHSRKLKILDIKAQAS----VAAKFRSGAVEADSKEVETKDENLAF 84
Query: 339 VAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAVEKLEIVE 515
VAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE LVQSV + + +G+ VE+L+IVE
Sbjct: 85 VAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALVQSVMAMKLDVEGSQPVERLDIVE 144
Query: 516 CDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATVAGVDHFI 692
CDLE+ ++I PA+ NASV++CCIGA EKEVFDVTGPYRIDY ATKNL+DAAT V+HFI
Sbjct: 145 CDLEKPNQIGPALGNASVLLCCIGAGEKEVFDVTGPYRIDYLATKNLVDAATATKVNHFI 204
Query: 693 LLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETH 872
+++SLGTNK+GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPGGMERPTDAYKETH
Sbjct: 205 MVSSLGTNKVGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPGGMERPTDAYKETH 264
Query: 873 NVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFGELLSKIP 1052
N++LS+EDTLFGG VSNLQVAELMAFM NR LSYCKVVEVIAETTAPL+P ELL+KIP
Sbjct: 265 NITLSEEDTLFGGLVSNLQVAELMAFMANNRRLSYCKVVEVIAETTAPLTPMDELLAKIP 324
Query: 1053 SQWVDRSTVKDSSIKE-------EEVKPVSSFAEDXXXXXXXXXXXXXXYSAYDDLKXXX 1211
SQ V+ + + + + E P S ++ Y+AYDDLK
Sbjct: 325 SQRVEPKEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQAKAMVTRPLSPYTAYDDLKPPT 384
Query: 1212 XXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTVKLHDTRPLSPYFVYE 1391
++AVS+PA + + E + V+ TRPLSPY Y
Sbjct: 385 SPTPIQPSSKKES-AGPLEAVSKPATQDTPPMPAPGVAETKPGPVETKTTRPLSPYAAYA 443
Query: 1392 DLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITEETPTKVLAEVPT-PKTSYLS 1568
DLK +AP G V+ TN AVP E N + + T PK LS
Sbjct: 444 DLKPPTSPSP--TAP-VGSVIPTSSTN-AVP--ETGNRAPPMAAAIDKQHHTEPKQKPLS 497
Query: 1569 PYPVYDELKPPTSPSP 1616
PYP+Y++LKPP SP+P
Sbjct: 498 PYPMYEDLKPPASPTP 513
>ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]
Length = 528
Score = 449 bits (1155), Expect = e-123
Identities = 263/485 (54%), Positives = 319/485 (65%), Gaps = 24/485 (4%)
Frame = +3
Query: 234 RAQASESAGASAKSISVTTDAVNQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRA 413
RAQAS S KS + + + +++ SKD+NLVFVAGATG+VGSRTVREL+KLGFRVRA
Sbjct: 56 RAQAS----GSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRA 111
Query: 414 GVRSAQRAETLVQSVKQLNI---SDGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCI 581
GVRSAQRA LVQSV+QL + S G AVEKLEIVECDLE+ + I A+ +AS V+C I
Sbjct: 112 GVRSAQRAGALVQSVEQLKLDGASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSI 171
Query: 582 GASEKEVFDVTGPYRIDYQATKNLIDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGV 761
GASEKEVFD+TGP+RIDYQATKNLIDAATVA V+HFIL+TSLGTNKIGFPAAILNLFWGV
Sbjct: 172 GASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGV 231
Query: 762 LIWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAEL 941
L+WKRKAEEAL+ASGLPYTIVRPGGMERPTDA+KETHN++LS EDTLFGG VSNLQ+AEL
Sbjct: 232 LVWKRKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAEL 291
Query: 942 MAFMTKNRDLSYCKVVEVIAETTAPLSPFGELLSKIPSQW----------VDRSTVKDSS 1091
+A M KNRDLSYCK+VE IAETTAPL+P ELL+KIPSQ + +V D
Sbjct: 292 LAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPP 351
Query: 1092 IKEEEVKPVSSFAEDXXXXXXXXXXXXXXYSAYDDLKXXXXXXXXXXXXXXNGHVIVVQA 1271
V+P + ++ Y YDDLK + +
Sbjct: 352 ANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLK--PPSSPSPSQPGGGKPTKISET 409
Query: 1272 VSEPAIA---ASQIDVSALTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRR 1442
V +P+ + +S V ++ SS V+ +PLSPY Y DLK +P
Sbjct: 410 VPKPSASDTPSSVPGVDGISQTTSSSKVE----KPLSPYVAYPDLKPPTS-----PSPNA 460
Query: 1443 GFVVAAQPTNEAVPSSEYSNITEETPTKVLA-------EVPTPKTSYLSPYPVYDELKPP 1601
V + P VP E I+ P ++ A +P PK+ LSPY +Y++LKPP
Sbjct: 461 PTVSVSTPAAAGVP--EIDTISSNGPAQLSAADEPKEEHLPEPKSRPLSPYTMYEDLKPP 518
Query: 1602 TSPSP 1616
SPSP
Sbjct: 519 ASPSP 523
Score = 61.2 bits (147), Expect(2) = 4e-08
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Frame = +3
Query: 1263 VQAVSEPAIAASQIDVSA-LTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPR 1439
+ AVS P A+ + V + T+ ++ K +PLSPY VY+DLK S+P
Sbjct: 342 IAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPP-------SSPS 394
Query: 1440 RGFVVAAQPT--NEAVPSSEYSNITEETP-------TKVLAEVPTPKTSYLSPYPVYDEL 1592
+PT +E VP S+ P T ++V P LSPY Y +L
Sbjct: 395 PSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKP----LSPYVAYPDL 450
Query: 1593 KPPTSPSPYAPKVSL 1637
KPPTSPSP AP VS+
Sbjct: 451 KPPTSPSPNAPTVSV 465
Score = 24.6 bits (52), Expect(2) = 4e-08
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1663 DPCHLPSKTVTQVRGLKPPCSPVPS 1737
+P P T LKPP SP PS
Sbjct: 500 EPKSRPLSPYTMYEDLKPPASPSPS 524