BLASTX nr result

ID: Coptis21_contig00009875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009875
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vit...   144   3e-32
emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinife...   144   3e-32
ref|XP_002528618.1| protein with unknown function [Ricinus commu...   122   1e-25
ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatu...   116   7e-24
gb|ABK23679.1| unknown [Picea sitchensis]                             108   2e-21

>ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vitis vinifera]
          Length = 236

 Score =  144 bits (364), Expect = 3e-32
 Identities = 96/206 (46%), Positives = 108/206 (52%), Gaps = 5/206 (2%)
 Frame = -2

Query: 786 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELDAKP 613
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  DAKP
Sbjct: 30  RLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTDAKP 89

Query: 612 XXXXXXXXXXXXXXXXXXXXXXXKDISFEKSVEPKYREVLSPEVGIHNSEVIESVACQMN 433
                                  K++      E     VLS E   H SE +ESVA QMN
Sbjct: 90  KTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMN 149

Query: 432 TLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXAEAQQQKTERGXXXXXX 262
            L+V+EN TTV P  +S E  N G                    EAQQQK  +       
Sbjct: 150 ELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMKPEQ 209

Query: 261 XXXXXXXEDWHKELKLMEDKKAELTS 184
                  E W KELKL+EDKKAEL +
Sbjct: 210 LDKMMKLEGWQKELKLLEDKKAELAA 235


>emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinifera]
           gi|298204603|emb|CBI23878.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  144 bits (364), Expect = 3e-32
 Identities = 96/206 (46%), Positives = 108/206 (52%), Gaps = 5/206 (2%)
 Frame = -2

Query: 786 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELDAKP 613
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  DAKP
Sbjct: 28  RLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTDAKP 87

Query: 612 XXXXXXXXXXXXXXXXXXXXXXXKDISFEKSVEPKYREVLSPEVGIHNSEVIESVACQMN 433
                                  K++      E     VLS E   H SE +ESVA QMN
Sbjct: 88  KTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMN 147

Query: 432 TLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXAEAQQQKTERGXXXXXX 262
            L+V+EN TTV P  +S E  N G                    EAQQQK  +       
Sbjct: 148 ELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMKPEQ 207

Query: 261 XXXXXXXEDWHKELKLMEDKKAELTS 184
                  E W KELKL+EDKKAEL +
Sbjct: 208 LDKMMKLEGWQKELKLLEDKKAELAA 233


>ref|XP_002528618.1| protein with unknown function [Ricinus communis]
           gi|223531963|gb|EEF33776.1| protein with unknown
           function [Ricinus communis]
          Length = 252

 Score =  122 bits (306), Expect = 1e-25
 Identities = 87/200 (43%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
 Frame = -2

Query: 786 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD---VPPGYDPELDAK 616
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQS+GAL KK M     VPPGYDP +DAK
Sbjct: 31  RILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSRGALWKKEMQSLHVVPPGYDPGMDAK 90

Query: 615 PXXXXXXXXXXXXXXXXXXXXXXXKDISFEKSVEPKYREVLSPEVGIHNSEVIESVACQM 436
           P                       K++    + + K REVL  E   H SE ++S+  QM
Sbjct: 91  PKTKSVKRNERKKEKRLQAALEKGKNLDASAAGDMK-REVLPDEDVGHASESVKSLTSQM 149

Query: 435 NTLSVSENYTTVAPMPDSTE---GSNTGTXXXXXXXXXXXXXXXAEAQQQKTERGXXXXX 265
           N L VS N     P  DSTE    + +                 AEAQQQK         
Sbjct: 150 NELDVSANPVLSIP-GDSTETLDPNASSQDIDKRIRALKKKIRQAEAQQQKATSQDMKPE 208

Query: 264 XXXXXXXXEDWHKELKLMED 205
                   E WH+ELK++ED
Sbjct: 209 QLEKLAKLEGWHQELKILED 228


>ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatula]
           gi|124360428|gb|ABN08438.1| ENSANGP00000004563 , related
           [Medicago truncatula] gi|355482143|gb|AES63346.1|
           Partner of Y14 and mago A [Medicago truncatula]
          Length = 218

 Score =  116 bits (291), Expect = 7e-24
 Identities = 77/206 (37%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
 Frame = -2

Query: 786 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD--VPPGYDPELDAKP 613
           R+LA TRRPDGTLRKP+RIRAGY PQDEVAIYQ K AL++K M     PPGYDP+LD+KP
Sbjct: 20  RILAPTRRPDGTLRKPVRIRAGYTPQDEVAIYQPKPALMRKEMASHIGPPGYDPQLDSKP 79

Query: 612 XXXXXXXXXXXXXXXXXXXXXXXKDISFEKSVEPKYREVLSPEVGIHNSEVIESVACQMN 433
                                     + E ++EP   E    +  +     + S+  Q+N
Sbjct: 80  KTKAVKRNERKKEKKRLQ--------AKETNLEPTVVEDSRKQENVIVENSVHSLTSQIN 131

Query: 432 TLSVSENYTTVAPMPDSTEGS---NTGTXXXXXXXXXXXXXXXAEAQQQKTERGXXXXXX 262
            L+VS + + V P  +S E S    +                  EA Q+KT         
Sbjct: 132 ELAVSGDTSIVTPTTNSVEASEPIGSAQDLDKRIRALKKKIRLTEALQEKTAEQDLKPEQ 191

Query: 261 XXXXXXXEDWHKELKLMEDKKAELTS 184
                  EDW KELK +EDKKAE+++
Sbjct: 192 LEKLAKLEDWRKELKQLEDKKAEISA 217


>gb|ABK23679.1| unknown [Picea sitchensis]
          Length = 228

 Score =  108 bits (270), Expect = 2e-21
 Identities = 72/203 (35%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
 Frame = -2

Query: 786 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPDVPPGYDPELDAKPXX 607
           R++A TRRPDGTLRKPIRIRAGYVPQ+EVAIYQSKGALL++GMP+VPPGYDP +++KP  
Sbjct: 30  RIVAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALLRRGMPEVPPGYDPLVESKPKT 89

Query: 606 XXXXXXXXXXXXXXXXXXXXXKDISFEKSVEPKYREVLSPEVGIHNSEVIESVACQMNTL 427
                                     + S      +  + E   +    +E+VA QM +L
Sbjct: 90  KSAKRNERRKEKKQQASIASSTSEKGQASENTVNGQAAATENRANRDPDVEAVAQQMGSL 149

Query: 426 SVSENYTTVAPMPDSTEGSNTGTXXXXXXXXXXXXXXXAEAQQQKT--ERGXXXXXXXXX 253
           +V    T+   +  S+E +N                      QQ +    G         
Sbjct: 150 TV----TSEVSVSVSSEQANPERMDLDKRIRALKKKIRLTESQQASMAGEGTLNPEQREK 205

Query: 252 XXXXEDWHKELKLMEDKKAELTS 184
               + W KELK +E+K+  L S
Sbjct: 206 LAKLDTWRKELKDLEEKRMALRS 228


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