BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009867
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    70   2e-10
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|3326...    68   9e-10

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
 Frame = +3

Query: 27  RKENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLK 197
           +  +RIS++P+ +  H++SFLP K A+ +S+L   WRY+ +S+ NL+FD  D    +   
Sbjct: 7   KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDD-DLLLDRDKP 65

Query: 198 RGD------FRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQD 356
            GD      F++FVD+ LL  + S I++F L  K  D  + S  +NSWI  A++ NVQ+
Sbjct: 66  IGDSERSICFKNFVDKVLLHGSISCIRKFRL--KCSDHELDSA-VNSWICTALERNVQE 121


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/116 (32%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
 Frame = +3

Query: 24  DRKENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKL 194
           ++ ++ IS++P+ I   V+SFLP K+A+ +S+L   W Y+ + ++ L+FD + +  + ++
Sbjct: 23  NKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDIGYCSSNEI 82

Query: 195 KRGDFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFK 362
           ++  F DFVD  LL  N   I+ FSL  K+ + + SS ++N WIS  +   V+  +
Sbjct: 83  RKACFVDFVDRVLLRLNSEHIRSFSL--KMSEKYDSS-YINKWISIVINLRVRKLR 135


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
 Frame = +3

Query: 42  ISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLKRGDFR 212
           I+ +P+ +  H++SFL  K+A+R+SIL   W ++  SLSNLEF Q  F    K KR  F 
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF----KAKRKIFM 95

Query: 213 DFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFKFSSYTWRFKK 392
           + V+  LL  + S+I++F+L+  + D    +    +W+S AV  NV++   + Y     +
Sbjct: 96  NSVERVLLLRDSSNIEKFTLSCGIDD----ATRTRTWVSAAVNRNVKELCVNFYEGGESE 151

Query: 393 ---LPQCLF 410
               P CLF
Sbjct: 152 SFVSPLCLF 160


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
 Frame = +3

Query: 33  ENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLKRG 203
           ++ IS +P  I  H++SFLP K+A+ + IL   WR +  SLSN +FD    ++T K K  
Sbjct: 15  KDMISDLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLSNFDFD----DRTWKSKI- 69

Query: 204 DFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFKFSSYTWR 383
            F +F+D     HN  +       ++V  ++ SSR +++WIS A+K N+++ K   YT  
Sbjct: 70  IFGNFMDRFCYLHNSRENSITKFRLRVNGSYPSSR-MSAWISAAIKDNLEELKLWIYTAD 128

Query: 384 FKKLPQCLF 410
              LP+ +F
Sbjct: 129 HVPLPRRIF 137


>ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|332646338|gb|AEE79859.1|
           F-box protein [Arabidopsis thaliana]
          Length = 345

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
 Frame = +3

Query: 36  NRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLK--- 197
           +R+  +P+ + SH++SFL  KEA  +S+L   WRY+ + + NL FD + F   ++ K   
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61

Query: 198 ---RGDFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQD 356
              R  F DFVD  L     S IK+FSL  ++G   + S  ++ WIS  +   V +
Sbjct: 62  DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIG---VDSDRVDGWISNVLNRGVSE 114