BLASTX nr result
ID: Coptis21_contig00009867
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009867 (467 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32919.3| unnamed protein product [Vitis vinifera] 70 1e-10 ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul... 70 2e-10 ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2... 69 5e-10 ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|3326... 68 9e-10 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 70.5 bits (171), Expect = 1e-10 Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 9/119 (7%) Frame = +3 Query: 27 RKENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLK 197 + +RIS++P+ + H++SFLP K A+ +S+L WRY+ +S+ NL+FD D + Sbjct: 7 KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDD-DLLLDRDKP 65 Query: 198 RGD------FRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQD 356 GD F++FVD+ LL + S I++F L K D + S +NSWI A++ NVQ+ Sbjct: 66 IGDSERSICFKNFVDKVLLHGSISCIRKFRL--KCSDHELDSA-VNSWICTALERNVQE 121 >ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 411 Score = 70.1 bits (170), Expect = 2e-10 Identities = 38/116 (32%), Positives = 71/116 (61%), Gaps = 3/116 (2%) Frame = +3 Query: 24 DRKENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKL 194 ++ ++ IS++P+ I V+SFLP K+A+ +S+L W Y+ + ++ L+FD + + + ++ Sbjct: 23 NKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDIGYCSSNEI 82 Query: 195 KRGDFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFK 362 ++ F DFVD LL N I+ FSL K+ + + SS ++N WIS + V+ + Sbjct: 83 RKACFVDFVDRVLLRLNSEHIRSFSL--KMSEKYDSS-YINKWISIVINLRVRKLR 135 >ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1| predicted protein [Populus trichocarpa] Length = 420 Score = 70.1 bits (170), Expect = 2e-10 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 6/129 (4%) Frame = +3 Query: 42 ISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLKRGDFR 212 I+ +P+ + H++SFL K+A+R+SIL W ++ SLSNLEF Q F K KR F Sbjct: 40 INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF----KAKRKIFM 95 Query: 213 DFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFKFSSYTWRFKK 392 + V+ LL + S+I++F+L+ + D + +W+S AV NV++ + Y + Sbjct: 96 NSVERVLLLRDSSNIEKFTLSCGIDD----ATRTRTWVSAAVNRNVKELCVNFYEGGESE 151 Query: 393 ---LPQCLF 410 P CLF Sbjct: 152 SFVSPLCLF 160 >ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1| predicted protein [Populus trichocarpa] Length = 462 Score = 68.6 bits (166), Expect = 5e-10 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 3/129 (2%) Frame = +3 Query: 33 ENRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLKRG 203 ++ IS +P I H++SFLP K+A+ + IL WR + SLSN +FD ++T K K Sbjct: 15 KDMISDLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLSNFDFD----DRTWKSKI- 69 Query: 204 DFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFKFSSYTWR 383 F +F+D HN + ++V ++ SSR +++WIS A+K N+++ K YT Sbjct: 70 IFGNFMDRFCYLHNSRENSITKFRLRVNGSYPSSR-MSAWISAAIKDNLEELKLWIYTAD 128 Query: 384 FKKLPQCLF 410 LP+ +F Sbjct: 129 HVPLPRRIF 137 >ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|332646338|gb|AEE79859.1| F-box protein [Arabidopsis thaliana] Length = 345 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 9/116 (7%) Frame = +3 Query: 36 NRISHIPEPIRSHVVSFLPMKEAMRSSIL---WRYVCSSLSNLEFDQVDFEKTKKLK--- 197 +R+ +P+ + SH++SFL KEA +S+L WRY+ + + NL FD + F ++ K Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61 Query: 198 ---RGDFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQD 356 R F DFVD L S IK+FSL ++G + S ++ WIS + V + Sbjct: 62 DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIG---VDSDRVDGWISNVLNRGVSE 114