BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009866
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    84   8e-14
ref|NP_001189735.1| F-box protein [Arabidopsis thaliana] gi|1222...    83   1e-13
ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680...    83   1e-13
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    80   1e-12
ref|XP_003613781.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    74   1e-10

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 103/388 (26%), Positives = 157/388 (40%), Gaps = 14/388 (3%)
 Frame = -1

Query: 1262 FDQVDFETTKKRKRGD-FRDFVDETLLSHNGSDIKRFGLTVKVGDTFISSRHLNSWISFA 1086
            FD  D    +  K  D   D VD+ L  H  + IK+  + + V  T + +  ++S +S A
Sbjct: 65   FDFRDSSPKRNSKSPDCLVDLVDQLL--HKSNRIKKLFIELPV--TIVDAGKVSSMLSSA 120

Query: 1085 VKHNVQDFEISSYGDEIE-KLPQCLFXXXXXXXXXLCSVVIKG-PRNIKFPMLKSLALHE 912
            + H+V D  ++   +     LP             +    +   P  I FP LK L+   
Sbjct: 121  LMHDVHDLTLNLESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAH 180

Query: 911  VTINDENLVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL------LDSNYP 750
            VT  +E     L S   CPV++ L    C      +S++IPTLK L +      LD N  
Sbjct: 181  VTFTNEKSAQRLFSG--CPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSC 238

Query: 749  DINISNSVLRKLKYMCGKPPNLIYENLVSVISAKLQFELDFSYYGGSMDSVSKCASKILV 570
               I    L  L Y      N    N  S++ A +  +L F     +   V+  A ++  
Sbjct: 239  MFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANI--DLGFFCVQNNELHVAVFAIELFS 296

Query: 569  WLRNVEKLCLMSGFIEFLSRDHYLLAGVVPFSCCSLKHLDVDMFPTENQAQVIALLLRSY 390
             L +VE L L    I+ L+     L  +  F   +L  L+V     +   +V+A +LR  
Sbjct: 297  RLGSVESLRLSDQTIQCLNYAKSALHLLPSFK--NLTRLEVHF--DDPSCEVLADILRKS 352

Query: 389  PHLQTLGXXXXXXXXXXXXXXIEV----GEFWKPKQLLAGDILNGLKTVGIEDFKGSDGE 222
            P L+ L                       E W    L      + LK+  I DF+G + E
Sbjct: 353  PKLEFLHIYGVHLVSCSRFSSGSYLSLDSEDWTSDSLPC-CFKSSLKSCDISDFRGDEAE 411

Query: 221  LYLVRFLLDNAKVLENMNI-CYSKIEKK 141
            + LV+FLL+N  +L  MNI C   + KK
Sbjct: 412  IRLVKFLLENVTLLREMNIYCTGYLSKK 439


>ref|NP_001189735.1| F-box protein [Arabidopsis thaliana]
            gi|122223784|sp|Q0WR05.1|FBL39_ARATH RecName:
            Full=F-box/LRR-repeat protein At2g42730
            gi|110736977|dbj|BAF00444.1| hypothetical protein
            [Arabidopsis thaliana] gi|330255068|gb|AEC10162.1| F-box
            protein [Arabidopsis thaliana]
          Length = 457

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 18/370 (4%)
 Frame = -1

Query: 1217 DFRDFVDETLLSHNGSDIKRFGLTVKVGDTF-ISSRHLNSWISFAVKHNVQDFEIS-SYG 1044
            ++  FVD+ L +  GS IK+  L   VG      S  + SWI   + H V D ++  +  
Sbjct: 68   NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLK 127

Query: 1043 DEIEKLPQCLFXXXXXXXXXLC-SVVIKGPRNIKFPMLKSLALHEVT-INDENLVNSLLS 870
             +   +P  +F         +     IK  +++  P+L++L L  V  +   N+V +L+S
Sbjct: 128  GKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLIS 187

Query: 869  SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-LDSNYPDINISNSVLRKLK---YMC 702
               CPV+E+LV+        T S+S P+LK LH+  D  +  I++    L   K   Y+ 
Sbjct: 188  R--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYVL 245

Query: 701  GKPPNLIYENLVSVISAKLQFELD----FSYYGGSMDSVSKCASKILVWLRNVEKLCLMS 534
            GK PN+    L S+I A+L   +D         GS+ S+      ++  +RNV  L L S
Sbjct: 246  GKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLINGIRNVRILHLSS 302

Query: 533  GFIEFLSRDHYLLAGVVPFSCCSLKHLD--VDMFPTENQA---QVIALLLRSYPHLQTLG 369
              +E L            FSC  +   D  V +    ++A   Q++ LL+++ P+L+TL 
Sbjct: 303  HTLELLY-----------FSCKEMPLFDSLVSLSIGNDKARGWQMLPLLIKNSPNLETL- 350

Query: 368  XXXXXXXXXXXXXXIEVGEFWKPKQLLAGDILNG-LKTVGIEDFKGSDGELYLVRFLLDN 192
                           +V   +   + +   + +  +K + I  ++G+  EL  ++  L+ 
Sbjct: 351  -IFMGLDHYITNRCGDVCVCYDTDESITSCLSSSQVKVLEILSYQGTTRELNQMKHFLEK 409

Query: 191  AKVLENMNIC 162
               LE + IC
Sbjct: 410  LPCLELVKIC 419


>ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680|gb|AAD21734.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis
            thaliana]
          Length = 737

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 18/370 (4%)
 Frame = -1

Query: 1217 DFRDFVDETLLSHNGSDIKRFGLTVKVGDTF-ISSRHLNSWISFAVKHNVQDFEIS-SYG 1044
            ++  FVD+ L +  GS IK+  L   VG      S  + SWI   + H V D ++  +  
Sbjct: 68   NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLK 127

Query: 1043 DEIEKLPQCLFXXXXXXXXXLC-SVVIKGPRNIKFPMLKSLALHEVT-INDENLVNSLLS 870
             +   +P  +F         +     IK  +++  P+L++L L  V  +   N+V +L+S
Sbjct: 128  GKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLIS 187

Query: 869  SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-LDSNYPDINISNSVLRKLK---YMC 702
               CPV+E+LV+        T S+S P+LK LH+  D  +  I++    L   K   Y+ 
Sbjct: 188  R--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYVL 245

Query: 701  GKPPNLIYENLVSVISAKLQFELD----FSYYGGSMDSVSKCASKILVWLRNVEKLCLMS 534
            GK PN+    L S+I A+L   +D         GS+ S+      ++  +RNV  L L S
Sbjct: 246  GKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLINGIRNVRILHLSS 302

Query: 533  GFIEFLSRDHYLLAGVVPFSCCSLKHLD--VDMFPTENQA---QVIALLLRSYPHLQTLG 369
              +E L            FSC  +   D  V +    ++A   Q++ LL+++ P+L+TL 
Sbjct: 303  HTLELLY-----------FSCKEMPLFDSLVSLSIGNDKARGWQMLPLLIKNSPNLETL- 350

Query: 368  XXXXXXXXXXXXXXIEVGEFWKPKQLLAGDILNG-LKTVGIEDFKGSDGELYLVRFLLDN 192
                           +V   +   + +   + +  +K + I  ++G+  EL  ++  L+ 
Sbjct: 351  -IFMGLDHYITNRCGDVCVCYDTDESITSCLSSSQVKVLEILSYQGTTRELNQMKHFLEK 409

Query: 191  AKVLENMNIC 162
               LE + IC
Sbjct: 410  LPCLELVKIC 419


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
            vinifera]
          Length = 610

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 110/394 (27%), Positives = 172/394 (43%), Gaps = 37/394 (9%)
 Frame = -1

Query: 1232 KRKRGDFRDFVDETLLSHNGSDIKRFGLTVKVGDTFISSRHLNSWISFAVKHNVQDFEI- 1056
            +R+   F + +D+TL+ H  S IK+F +       F SS  +N WI  A + NV++  + 
Sbjct: 121  RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSS--VNVWIRHATRKNVEELHLQ 178

Query: 1055 --------SSYGDEIEKLPQCLFXXXXXXXXXLCSVVIKGPRNIKFPMLKSLALHEVTIN 900
                    SS  D    LPQ L+         L    IK    I +P LK+L++  V + 
Sbjct: 179  FRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELC 238

Query: 899  DENLVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL---LDSNYPD----IN 741
            D+ L+  +LS   CP +E L +  C   IN+L+I+  +LK L +    DS++      + 
Sbjct: 239  DD-LIEEILSG--CPALESLELHHC-FGINSLNITSASLKKLVINRYWDSSHSHHRSVLK 294

Query: 740  ISNSVLRKLKYMCGK-PPNLIYENLVSVISAKLQFELDFSYYGGSMDSVS---KCASKIL 573
            IS   ++ L  +          +N+ S+  A L FEL     G   D      K   K+L
Sbjct: 295  ISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQE-GNPKDHYKLYHKVVMKLL 353

Query: 572  VWLRNVEKLCLMSGFIEFLSRDHYLLAGVVPFSCCS-LKHLDVDMFPTENQAQVIALLLR 396
              + +V+ L + +  I+ LS    +  G    S  S LK L +D    +     IA LL+
Sbjct: 354  KSVNHVKALTVGTWCIQVLS----IFEGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQ 409

Query: 395  SYPHLQTLGXXXXXXXXXXXXXXIEVG------------EFWKPKQLLAGDILNGLKTVG 252
            S  HL+T                +EVG            ++W  ++ +  + L  LKTV 
Sbjct: 410  SSTHLETF--VINMISPCSQQISVEVGFSFTDLHNFDEEKYWSSREGVLANSLINLKTVK 467

Query: 251  IEDF----KGSDGELYLVRFLLDNAKVLENMNIC 162
            I        G +    LV+FLL NA++LE + IC
Sbjct: 468  IIGVIWNQPGIELVFGLVKFLLKNARMLEKVEIC 501


>ref|XP_003613781.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355515116|gb|AES96739.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 422

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 90/366 (24%), Positives = 146/366 (39%), Gaps = 14/366 (3%)
 Frame = -1

Query: 1220 GDFRDFVDETLLSHNGSDIKRFGLTVKVGDTF--ISSRHLNSWISFAVKHNVQDFEISSY 1047
            G F   +D  LL H+G  I +F +T    D     S   ++ WI      +V++  +  +
Sbjct: 69   GKFLRIIDHVLLLHSGP-INKFEVTDSECDLLGVNSMADVDRWILHLTGRSVKELVLDIW 127

Query: 1046 GDEIEKLPQCLFXXXXXXXXXLCSVVIKGPRNIK-FPMLKSLALHEVTINDENLVNSLLS 870
              E+ K+P CLF         L   ++K P   K F  L+SL LH+  +  +   N +  
Sbjct: 128  AGELYKIPWCLFSYQSLHHLKLSHCLLKPPTMFKGFSSLESLVLHDALMTQDAFENLI-- 185

Query: 869  SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHLLDSNYPDINISNSVLRKLKYMCGKPP 690
             S CP +EKL++          +I  P LK    ++  +  I+  N++   + Y+     
Sbjct: 186  -SGCPQLEKLILTSVK-GFTQFNIHAPNLKFFR-INGKFEGISFDNTLQLAVVYL----- 237

Query: 689  NLIYENLVSVISAKLQFELDFSYYGGSMDSVSKCASKILVWLRNVEKLCLMSGFIEFLSR 510
                      +S+ L  E + S      D +    S ++V      + CL          
Sbjct: 238  ---------ELSSYLNSESNHSNLFNFFDHLPHIKSLLIV------EHCL---------- 272

Query: 509  DHYLLAGVVPFS----CCSLKHLDVDM-FPTENQAQVIALLLRSYPHLQTLGXXXXXXXX 345
              YL AG+VP         L  L +++ F    +  V+  LL+S P+LQ L         
Sbjct: 273  -KYLAAGIVPVELPTPIIDLSSLLLEINFNDLREISVVPCLLKSSPNLQRL--------- 322

Query: 344  XXXXXXIEVGEFWKPKQLLAGDILNG------LKTVGIEDFKGSDGELYLVRFLLDNAKV 183
                   E  +   P      DI +G      +K V I+D  G+  EL  +RFLL  + V
Sbjct: 323  RMIARLEEQTDLVTPVSNCMEDIFSGPTMSLSVKYVVIKDISGTKSELDFIRFLLQYSPV 382

Query: 182  LENMNI 165
            L+ M +
Sbjct: 383  LQKMTV 388