BLASTX nr result

ID: Coptis21_contig00009841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009841
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532580.1| cop9 signalosome complex subunit, putative [...   260   2e-67
ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|1...   260   2e-67
dbj|BAJ33758.1| unnamed protein product [Thellungiella halophila]     259   5e-67
ref|XP_003520479.1| PREDICTED: COP9 signalosome complex subunit ...   258   7e-67

>ref|XP_002532580.1| cop9 signalosome complex subunit, putative [Ricinus communis]
           gi|223527689|gb|EEF29797.1| cop9 signalosome complex
           subunit, putative [Ricinus communis]
          Length = 439

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/146 (86%), Positives = 135/146 (92%)
 Frame = +3

Query: 132 KFQQLYEKALSIKSAIPHPRIMGIIRECGGKIHMAERQWAEAATDFFEAFKNYDEAGNQR 311
           K +QLY+KAL+IKSAIPHPRIMGIIRECGGK+HMAERQWAEAATDFFEAFKNYDEAGNQR
Sbjct: 209 KLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQR 268

Query: 312 CIQTLKYFVLANMLMESKVNPFDGQVAKPYKNDPEILAMTNLIGAYQRNEILAFEKTLKT 491
            IQ LKY VLANMLMES+VNPFDGQ AKPYKNDPEILAMTNLI AYQRNEIL FEK LK+
Sbjct: 269 RIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKS 328

Query: 492 NRSTIMDDPFIRKYIQDLLKKIRTQV 569
           NR TIMDDPFIR YI+DLLK +RTQV
Sbjct: 329 NRRTIMDDPFIRNYIEDLLKNVRTQV 354


>ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|222872773|gb|EEF09904.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/146 (86%), Positives = 135/146 (92%)
 Frame = +3

Query: 132 KFQQLYEKALSIKSAIPHPRIMGIIRECGGKIHMAERQWAEAATDFFEAFKNYDEAGNQR 311
           K +QLY+KAL+IKSAIPHPRIMGIIRECGGK+HMAERQWAEAATDFFEAFKNYDEAGNQR
Sbjct: 209 KLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQR 268

Query: 312 CIQTLKYFVLANMLMESKVNPFDGQVAKPYKNDPEILAMTNLIGAYQRNEILAFEKTLKT 491
            IQ LKY VLANMLMES+VNPFDGQ AKPYKNDPEILAMTNLI AYQRNEIL FEK LK+
Sbjct: 269 RIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKS 328

Query: 492 NRSTIMDDPFIRKYIQDLLKKIRTQV 569
           NR TIMDDPFIR YI+DLLK +RTQV
Sbjct: 329 NRRTIMDDPFIRNYIEDLLKNVRTQV 354


>ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|118481037|gb|ABK92472.1|
           unknown [Populus trichocarpa]
           gi|222850648|gb|EEE88195.1| predicted protein [Populus
           trichocarpa]
          Length = 439

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/146 (86%), Positives = 135/146 (92%)
 Frame = +3

Query: 132 KFQQLYEKALSIKSAIPHPRIMGIIRECGGKIHMAERQWAEAATDFFEAFKNYDEAGNQR 311
           K +QLY+KAL+IKSAIPHPRIMGIIRECGGK+HMAERQWAEAATDFFEAFKNYDEAGNQR
Sbjct: 209 KLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQR 268

Query: 312 CIQTLKYFVLANMLMESKVNPFDGQVAKPYKNDPEILAMTNLIGAYQRNEILAFEKTLKT 491
            IQ LKY VLANMLMES+VNPFDGQ AKPYKNDPEILAMTNLI AYQRNEIL FEK LK+
Sbjct: 269 RIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKS 328

Query: 492 NRSTIMDDPFIRKYIQDLLKKIRTQV 569
           NR TIMDDPFIR YI+DLLK +RTQV
Sbjct: 329 NRRTIMDDPFIRNYIEDLLKNVRTQV 354


>dbj|BAJ33758.1| unnamed protein product [Thellungiella halophila]
          Length = 439

 Score =  259 bits (661), Expect = 5e-67
 Identities = 125/146 (85%), Positives = 136/146 (93%)
 Frame = +3

Query: 132 KFQQLYEKALSIKSAIPHPRIMGIIRECGGKIHMAERQWAEAATDFFEAFKNYDEAGNQR 311
           K +QLY+KAL+IKSAIPHPRIMGIIRECGGK+HMAERQWAEAATDFFEAFKNYDEAGNQR
Sbjct: 209 KLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQR 268

Query: 312 CIQTLKYFVLANMLMESKVNPFDGQVAKPYKNDPEILAMTNLIGAYQRNEILAFEKTLKT 491
            IQ LKY VLANMLMES+VNPFDGQ AKPYKNDPEILAMTNLI AYQRNEI+ FE+ LK+
Sbjct: 269 RIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFERILKS 328

Query: 492 NRSTIMDDPFIRKYIQDLLKKIRTQV 569
           NR TIMDDPFIR Y++DLLKK+RTQV
Sbjct: 329 NRRTIMDDPFIRNYMEDLLKKVRTQV 354


>ref|XP_003520479.1| PREDICTED: COP9 signalosome complex subunit 2-like [Glycine max]
          Length = 439

 Score =  258 bits (660), Expect = 7e-67
 Identities = 127/146 (86%), Positives = 134/146 (91%)
 Frame = +3

Query: 132 KFQQLYEKALSIKSAIPHPRIMGIIRECGGKIHMAERQWAEAATDFFEAFKNYDEAGNQR 311
           K +QLY+KAL+IKSAIPHPRIMGII ECGGK+HMAERQWAEAATDFFEAFKNYDEAGNQR
Sbjct: 209 KLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQR 268

Query: 312 CIQTLKYFVLANMLMESKVNPFDGQVAKPYKNDPEILAMTNLIGAYQRNEILAFEKTLKT 491
            IQ LKY VLANMLMES+VNPFDGQ AKPYKNDPEILAMTNLI AYQRNEIL FEK LK+
Sbjct: 269 RIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKS 328

Query: 492 NRSTIMDDPFIRKYIQDLLKKIRTQV 569
           NR TIMDDPFIR YI+DLLK IRTQV
Sbjct: 329 NRRTIMDDPFIRNYIEDLLKNIRTQV 354


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