BLASTX nr result
ID: Coptis21_contig00009833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009833
(475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299974.1| predicted protein [Populus trichocarpa] gi|2... 172 1e-48
emb|CBI24291.3| unnamed protein product [Vitis vinifera] 168 5e-48
ref|XP_002265928.1| PREDICTED: proteasome-associated protein ECM... 168 5e-48
ref|XP_003545430.1| PREDICTED: LOW QUALITY PROTEIN: proteasome-a... 169 7e-48
ref|XP_002526067.1| conserved hypothetical protein [Ricinus comm... 164 7e-47
>ref|XP_002299974.1| predicted protein [Populus trichocarpa] gi|222847232|gb|EEE84779.1|
predicted protein [Populus trichocarpa]
Length = 1847
Score = 172 bits (437), Expect(2) = 1e-48
Identities = 86/124 (69%), Positives = 107/124 (86%)
Frame = +1
Query: 13 ILMVLHEKLGKILSGEDIKAIQKIVISLGHICTKERTLSSINIALDLIFSLCRSKVEDIL 192
IL++L+EKL K+LSG+D KAIQKIVISLGHIC KE + S +NIALDLIFSLCRSKVED+L
Sbjct: 818 ILILLNEKLSKLLSGDDNKAIQKIVISLGHICVKETSPSLLNIALDLIFSLCRSKVEDVL 877
Query: 193 FAAGEALSFLWGGVTVTADVILKSNYTSLSLASNFLMGDLPSALSRRSATEETKANEECL 372
FAAGEALSFLWGG+ VTADVILK+NY+SLS+ SNFL+GD+ +LS+ + E+ +ANE+
Sbjct: 878 FAAGEALSFLWGGIPVTADVILKTNYSSLSMTSNFLLGDISLSLSKYNPNEKCEANEDYH 937
Query: 373 VTVR 384
T+R
Sbjct: 938 ATIR 941
Score = 45.8 bits (107), Expect(2) = 1e-48
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 395 TVTDVITKKLFDDLLYSSRREERCAGT 475
T+ D IT+KLF+ LLYSSR+EERCAGT
Sbjct: 939 TIRDSITRKLFETLLYSSRKEERCAGT 965
>emb|CBI24291.3| unnamed protein product [Vitis vinifera]
Length = 2456
Score = 168 bits (425), Expect(2) = 5e-48
Identities = 89/127 (70%), Positives = 102/127 (80%)
Frame = +1
Query: 4 SAGILMVLHEKLGKILSGEDIKAIQKIVISLGHICTKERTLSSINIALDLIFSLCRSKVE 183
S IL VL KL K+LSG+D KA+QKIVISLGHIC KE + S +NIALDLIFSL RSKVE
Sbjct: 1414 SVSILTVLQAKLRKLLSGDDPKAVQKIVISLGHICFKETSPSHLNIALDLIFSLSRSKVE 1473
Query: 184 DILFAAGEALSFLWGGVTVTADVILKSNYTSLSLASNFLMGDLPSALSRRSATEETKANE 363
D LFAAGEALSFLWG V VTAD+ILK+NYTSLS+ S+FL D+ S+LS S+ EET+ANE
Sbjct: 1474 DTLFAAGEALSFLWGSVPVTADIILKTNYTSLSMTSDFLTRDVSSSLSSYSSNEETEANE 1533
Query: 364 ECLVTVR 384
C V VR
Sbjct: 1534 NCRVMVR 1540
Score = 48.1 bits (113), Expect(2) = 5e-48
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2
Query: 386 CLITVTDVITKKLFDDLLYSSRREERCAGT 475
C + V D IT+KLFD LLYSSR++ERCAGT
Sbjct: 1535 CRVMVRDAITRKLFDVLLYSSRKDERCAGT 1564
>ref|XP_002265928.1| PREDICTED: proteasome-associated protein ECM29 homolog [Vitis
vinifera]
Length = 1813
Score = 168 bits (425), Expect(2) = 5e-48
Identities = 89/127 (70%), Positives = 102/127 (80%)
Frame = +1
Query: 4 SAGILMVLHEKLGKILSGEDIKAIQKIVISLGHICTKERTLSSINIALDLIFSLCRSKVE 183
S IL VL KL K+LSG+D KA+QKIVISLGHIC KE + S +NIALDLIFSL RSKVE
Sbjct: 771 SVSILTVLQAKLRKLLSGDDPKAVQKIVISLGHICFKETSPSHLNIALDLIFSLSRSKVE 830
Query: 184 DILFAAGEALSFLWGGVTVTADVILKSNYTSLSLASNFLMGDLPSALSRRSATEETKANE 363
D LFAAGEALSFLWG V VTAD+ILK+NYTSLS+ S+FL D+ S+LS S+ EET+ANE
Sbjct: 831 DTLFAAGEALSFLWGSVPVTADIILKTNYTSLSMTSDFLTRDVSSSLSSYSSNEETEANE 890
Query: 364 ECLVTVR 384
C V VR
Sbjct: 891 NCRVMVR 897
Score = 48.1 bits (113), Expect(2) = 5e-48
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2
Query: 386 CLITVTDVITKKLFDDLLYSSRREERCAGT 475
C + V D IT+KLFD LLYSSR++ERCAGT
Sbjct: 892 CRVMVRDAITRKLFDVLLYSSRKDERCAGT 921
>ref|XP_003545430.1| PREDICTED: LOW QUALITY PROTEIN: proteasome-associated protein ECM29
homolog [Glycine max]
Length = 1814
Score = 169 bits (427), Expect(2) = 7e-48
Identities = 84/127 (66%), Positives = 108/127 (85%)
Frame = +1
Query: 4 SAGILMVLHEKLGKILSGEDIKAIQKIVISLGHICTKERTLSSINIALDLIFSLCRSKVE 183
S GIL++L +KL K+LSG+DIKAIQKIVIS+GHIC KE + + +++AL+LIFSLCRSKVE
Sbjct: 776 SDGILIMLSDKLSKLLSGDDIKAIQKIVISIGHICVKETSSTELDMALNLIFSLCRSKVE 835
Query: 184 DILFAAGEALSFLWGGVTVTADVILKSNYTSLSLASNFLMGDLPSALSRRSATEETKANE 363
DILFAAGEALSFLWGGV AD+ILK+NYTSLS+ASNFLMGDL S++S++S E+++ +
Sbjct: 836 DILFAAGEALSFLWGGVPFNADIILKTNYTSLSMASNFLMGDLTSSVSKQSTNEQSEYSG 895
Query: 364 ECLVTVR 384
+ VR
Sbjct: 896 DYHAAVR 902
Score = 47.0 bits (110), Expect(2) = 7e-48
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2
Query: 398 VTDVITKKLFDDLLYSSRREERCAGT 475
V D ITKKLFD LLYSSR+EERCAGT
Sbjct: 901 VRDAITKKLFDVLLYSSRKEERCAGT 926
>ref|XP_002526067.1| conserved hypothetical protein [Ricinus communis]
gi|223534648|gb|EEF36344.1| conserved hypothetical
protein [Ricinus communis]
Length = 1011
Score = 164 bits (414), Expect(2) = 7e-47
Identities = 84/127 (66%), Positives = 101/127 (79%)
Frame = +1
Query: 4 SAGILMVLHEKLGKILSGEDIKAIQKIVISLGHICTKERTLSSINIALDLIFSLCRSKVE 183
S IL ++ EKL K+LSG+DIKA QKI+ISLGHIC E + +NIALDLIF LCRSKVE
Sbjct: 781 SVEILSLIREKLSKLLSGDDIKATQKILISLGHICAMETSTLQLNIALDLIFGLCRSKVE 840
Query: 184 DILFAAGEALSFLWGGVTVTADVILKSNYTSLSLASNFLMGDLPSALSRRSATEETKANE 363
DILFAAGEALSFLWGGV VTAD+IL++NYTSLS+ SNFL+GD+ +LSR S + + NE
Sbjct: 841 DILFAAGEALSFLWGGVPVTADLILRTNYTSLSMTSNFLLGDVNFSLSRYSFNGKCETNE 900
Query: 364 ECLVTVR 384
+ TVR
Sbjct: 901 DYHATVR 907
Score = 48.5 bits (114), Expect(2) = 7e-47
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 395 TVTDVITKKLFDDLLYSSRREERCAGT 475
TV D IT+KLFD LLYSSR+EERCAGT
Sbjct: 905 TVRDAITRKLFDTLLYSSRKEERCAGT 931