BLASTX nr result

ID: Coptis21_contig00009832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009832
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265285.2| PREDICTED: putative disease resistance prote...   110   1e-22
ref|XP_002265970.1| PREDICTED: putative disease resistance prote...   108   7e-22
ref|XP_002531304.1| hypothetical protein RCOM_1055510 [Ricinus c...   107   9e-22
emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]   107   1e-21
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...   106   2e-21

>ref|XP_002265285.2| PREDICTED: putative disease resistance protein RGA1-like [Vitis
            vinifera]
          Length = 1467

 Score =  110 bits (276), Expect = 1e-22
 Identities = 60/128 (46%), Positives = 75/128 (58%)
 Frame = +1

Query: 7    TTLEKLWIGSCFSLMSWPNGLGNLTSLVDLWISCSRNLQSLPEEMRHLTALKDLTIGGWD 186
            T L  L I     L S P+ +G LTSL DL I     L SLPEE+  L  LK LTI  W 
Sbjct: 1032 TALHTLSIDYSCGLASLPSWIGGLTSLTDLEIGTCPELTSLPEELHCLRILKSLTIHDWS 1091

Query: 187  GLKTLPEWLKSFTSLRFLQISYFPNLLCVPDWIHCLTALRVLGINICDALTTRCQKDTGE 366
             L TLP W+ S +SL +LQI   P L  +P+ +  LT L +L I+ C  L+ RCQ++ GE
Sbjct: 1092 SLTTLPAWIGSLSSLEYLQIRKCPKLTSLPEEMRSLTTLYLLEISECPYLSKRCQREKGE 1151

Query: 367  DWHKIAHI 390
            DW KIAH+
Sbjct: 1152 DWPKIAHV 1159



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +1

Query: 79   TSLVDLWISCSRNLQSLPEEM-RHLTALKDLTIGGWDGLKTLPEWLKSFTSLRFLQISYF 255
            +SL  + I    +L SLP+E+ +H++ L+ L IG      TLP W+ + TSL  L+I+  
Sbjct: 959  SSLKSVRIQDIDDLMSLPDELHQHISTLQTLKIGDCSHFATLPHWIGNLTSLTHLRITNC 1018

Query: 256  PNLLCVPDWIHCLTALRVLGIN 321
            P L  +P  +H LTAL  L I+
Sbjct: 1019 PKLTSLPQEMHSLTALHTLSID 1040


>ref|XP_002265970.1| PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
          Length = 1211

 Score =  108 bits (269), Expect = 7e-22
 Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 30/164 (18%)
 Frame = +1

Query: 7    TTLEKLWIGSCFSLMSWPNGLGNLTSLVDLWISCSRNLQ--------------------- 123
            T+L  L I  C SLM    G+ +LT+L  L I   R L                      
Sbjct: 1023 TSLSNLLINDCHSLMHLSQGIQHLTTLKGLRILQCRELDLSDKEDDDDTPFQGLRSLHHL 1082

Query: 124  ---------SLPEEMRHLTALKDLTIGGWDGLKTLPEWLKSFTSLRFLQISYFPNLLCVP 276
                     SLP+ +  +T+L+ LTIG   GL TLP+W+ S TSL+ LQIS  P L  +P
Sbjct: 1083 HIQYIPKLVSLPKGLLQVTSLQSLTIGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLP 1142

Query: 277  DWIHCLTALRVLGINICDALTTRCQKDTGEDWHKIAHIPEIEVN 408
            + I CL+ L+ L I++C  L  RCQ + GEDW KI+H+PEI +N
Sbjct: 1143 EEIRCLSTLQTLRISLCRHLLERCQMEIGEDWPKISHVPEIYIN 1186


>ref|XP_002531304.1| hypothetical protein RCOM_1055510 [Ricinus communis]
           gi|223529095|gb|EEF31076.1| hypothetical protein
           RCOM_1055510 [Ricinus communis]
          Length = 195

 Score =  107 bits (268), Expect = 9e-22
 Identities = 59/133 (44%), Positives = 77/133 (57%)
 Frame = +1

Query: 7   TTLEKLWIGSCFSLMSWPNGLGNLTSLVDLWISCSRNLQSLPEEMRHLTALKDLTIGGWD 186
           T L+ L IG C  L S PN +GNL SL  L I     L  LPE + HLTAL+ L I   +
Sbjct: 43  TALQILEIGPCEELSSLPNQIGNLASLSGLAIQGCPKLMCLPESIGHLTALRTLEIRNCE 102

Query: 187 GLKTLPEWLKSFTSLRFLQISYFPNLLCVPDWIHCLTALRVLGINICDALTTRCQKDTGE 366
           GL +L + +++  SL   +I + P L+C+PD I  L  LR L I  C  L  RC+KD  E
Sbjct: 103 GLSSLSDQIENLVSLLCFEIQHCPKLMCLPDGISNLKMLRELEIYHCPNLQRRCEKDRRE 162

Query: 367 DWHKIAHIPEIEV 405
           DW KI+HIP+  +
Sbjct: 163 DWPKISHIPDTRI 175


>emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]
          Length = 1211

 Score =  107 bits (266), Expect = 1e-21
 Identities = 64/164 (39%), Positives = 85/164 (51%), Gaps = 30/164 (18%)
 Frame = +1

Query: 7    TTLEKLWIGSCFSLMSWPNGLGNLTSLVDLWISCSRNLQ--------------------- 123
            T+L  L I  C SLM    G+ +LT L  L I   R L                      
Sbjct: 1023 TSLXNLLINDCHSLMHLSQGIQHLTXLKGLRILQCRELDLSDKEDDDDTPFQGLRSLHHL 1082

Query: 124  ---------SLPEEMRHLTALKDLTIGGWDGLKTLPEWLKSFTSLRFLQISYFPNLLCVP 276
                     SLP+ +  +T+L+ LTIG   GL TLP+W+ S TSL+ LQIS  P L  +P
Sbjct: 1083 HIQYIPKLVSLPKGLLQVTSLQSLTIGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLP 1142

Query: 277  DWIHCLTALRVLGINICDALTTRCQKDTGEDWHKIAHIPEIEVN 408
            + I CL+ L+ L I++C  L  RCQ + GEDW KI+H+PEI +N
Sbjct: 1143 EEIRCLSTLQTLRISLCRHLLERCQMEIGEDWPKISHVPEIYIN 1186


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
 Frame = +1

Query: 7    TTLEKLWIGSCFSLMS-WPNGLGNLTSLVDLWISCSRNLQSLPEEMRHLTALKDLTIGGW 183
            T LEKL I  C  ++      + N TSL  L IS      SLP  ++H+T L+DL +  +
Sbjct: 987  TALEKLCIVGCPKMVHLMEEDVQNFTSLQSLTISHCFKFTSLPVGIQHMTTLRDLHLLDF 1046

Query: 184  DGLKTLPEWLKSFTSLRFLQISYFPNLLCVPDWIHCLTALRVLGINICDALTTRCQKDTG 363
             GL+TLPEW+++   LR L I   PNL  +P+ +  LT+L  L I  C  L  RC+K+ G
Sbjct: 1047 PGLQTLPEWIENLKLLRELSIWDCPNLTSLPNAMQHLTSLEFLSIWKCPNLEKRCKKEEG 1106

Query: 364  EDWHKIAHIPEIEVNFIRIQ*KKYLQCQLSRHRQH 468
            EDWHKI H+P+IE+    I+ ++ +  +++ + +H
Sbjct: 1107 EDWHKIKHVPDIEIKDQEIRMEQIMAPEIAANDKH 1141


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