BLASTX nr result

ID: Coptis21_contig00009829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009829
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250...    96   3e-18
ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806...    89   3e-16
gb|AFK41935.1| unknown [Lotus japonicus]                               81   1e-13
ref|XP_003636963.1| hypothetical protein MTR_065s0044 [Medicago ...    81   1e-13
ref|XP_002515290.1| conserved hypothetical protein [Ricinus comm...    80   2e-13

>ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250421 [Vitis vinifera]
          Length = 89

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/71 (70%), Positives = 55/71 (77%)
 Frame = +2

Query: 65  MENEANIVGPPRSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVP 244
           ME +     PP+  VKAT  L  E YSVNAS GTISEQLVSVKEES+ ILK+FITKHNVP
Sbjct: 1   MEAQTEGGSPPKPRVKATLNLGPETYSVNASKGTISEQLVSVKEESMGILKEFITKHNVP 60

Query: 245 NDVPDELVEAS 277
           NDVPDE +EAS
Sbjct: 61  NDVPDEPLEAS 71


>ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806261 [Glycine max]
          Length = 88

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/60 (73%), Positives = 52/60 (86%)
 Frame = +2

Query: 98  RSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEAS 277
           R H+KATF L SE YSV A+ G++SEQLVS+KEES+ ILKDFITKHNVP+DVPDE +EAS
Sbjct: 9   RPHLKATFRLGSESYSVQANKGSLSEQLVSLKEESMTILKDFITKHNVPHDVPDEPLEAS 68


>gb|AFK41935.1| unknown [Lotus japonicus]
          Length = 91

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +2

Query: 65  MENEANIVGPPRSHVKATFCLNSEVYSVNASSGT-ISEQLVSVKEESVCILKDFITKHNV 241
           ME E       +S VKAT  L +E YSV A+ G+ +SEQLVS+KEES+ +LKDFITKHNV
Sbjct: 1   METEPCDAMHSKSQVKATLRLGTESYSVQATKGSSLSEQLVSLKEESMAVLKDFITKHNV 60

Query: 242 PNDVPDELVEAS 277
           P DVPDE +EAS
Sbjct: 61  PQDVPDESLEAS 72


>ref|XP_003636963.1| hypothetical protein MTR_065s0044 [Medicago truncatula]
           gi|355502898|gb|AES84101.1| hypothetical protein
           MTR_065s0044 [Medicago truncatula]
          Length = 94

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +2

Query: 65  MENEANIVGPPRSHVKATFCLNSEVYSVNASSGT-ISEQLVSVKEESVCILKDFITKHNV 241
           ME E      PR  V ATF L +E YSV A+ G+ +SEQLV++KE+S+ +LKDFITKHN+
Sbjct: 2   METELCDAVVPRPQVNATFRLGTESYSVQATKGSSLSEQLVNMKEQSMAVLKDFITKHNI 61

Query: 242 PNDVPDELVEAS 277
           P DVPDE +EAS
Sbjct: 62  PQDVPDESLEAS 73


>ref|XP_002515290.1| conserved hypothetical protein [Ricinus communis]
           gi|223545770|gb|EEF47274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
 Frame = +2

Query: 65  MENEANIVGPPRSHVKATFCLNSEVYSVNASSG-TISEQLVSVKEESVCILKDFITKHNV 241
           ME +A+      S VKA   L SE+YS++A  G TISE+LVS+KE+S+ +LK+FITKHN 
Sbjct: 1   MEAQAHDAVTQASRVKAIIKLGSEIYSIDADKGSTISEELVSLKEKSMTVLKEFITKHNA 60

Query: 242 PNDVPDELVEAS 277
           P+DVPDELVE S
Sbjct: 61  PSDVPDELVEMS 72


Top