BLASTX nr result
ID: Coptis21_contig00009804
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009804 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534772.1| PREDICTED: probable receptor-like protein ki... 52 7e-09 ref|XP_003594535.1| Kinase-like protein [Medicago truncatula] gi... 51 3e-07 ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|2... 50 8e-06 >ref|XP_003534772.1| PREDICTED: probable receptor-like protein kinase At1g30570-like [Glycine max] Length = 852 Score = 52.4 bits (124), Expect(2) = 7e-09 Identities = 21/54 (38%), Positives = 35/54 (64%) Frame = +1 Query: 1 GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYCGQREK 162 G+L+Y + G + + K RA+WVGVG G+ S+A++A + + FC+C R+K Sbjct: 408 GNLAYVERFDLGGNSGNKSKARAIWVGVGAGVASVAIVALIVGLVFCFCNGRKK 461 Score = 32.3 bits (72), Expect(2) = 7e-09 Identities = 18/36 (50%), Positives = 22/36 (61%) Frame = +3 Query: 207 NDTTSAQGSKFPVGTLNFTGSMANNRVGKHFTLAEL 314 N T A+GS GT GS+ + RVGK FTLAE+ Sbjct: 485 NSTVGAKGS---AGTQKPYGSVGSTRVGKKFTLAEI 517 >ref|XP_003594535.1| Kinase-like protein [Medicago truncatula] gi|355483583|gb|AES64786.1| Kinase-like protein [Medicago truncatula] Length = 920 Score = 51.2 bits (121), Expect(2) = 3e-07 Identities = 22/54 (40%), Positives = 34/54 (62%) Frame = +1 Query: 1 GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYCGQREK 162 G+L+Y K +G + S K + LW+GVG GI S+A++A + FC+C +R K Sbjct: 404 GNLAYVEKFDLAGKSGSSSKAKVLWIGVGAGIASVAIVACVGVFVFCFCKRRRK 457 Score = 27.7 bits (60), Expect(2) = 3e-07 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +3 Query: 159 KNRSCQPG*CPFFTIR----NDTTSAQGSKFPVGTLNFTGSMANNRVGKHFTLAEL 314 KN S PG P F N T A+GS G G++ + GK FTLAE+ Sbjct: 463 KNNS--PGWRPIFLYGGAAVNSTVGAKGS---TGNQKLYGTVTSTGAGKRFTLAEI 513 >ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|222846310|gb|EEE83857.1| predicted protein [Populus trichocarpa] Length = 840 Score = 49.7 bits (117), Expect(2) = 8e-06 Identities = 19/49 (38%), Positives = 31/49 (63%) Frame = +1 Query: 1 GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYC 147 G+L+Y + +G +AS +K LW+G+G G+ S ++A CT FC+C Sbjct: 401 GNLAYGDRIGPTGKSASHLKSWILWLGIGAGVASALIIAIACTCIFCFC 449 Score = 24.6 bits (52), Expect(2) = 8e-06 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +3 Query: 177 PG*CPFFTIRNDTTSAQGSKFPVGTLNFTGSMAN-NRVGKHFTLAEL 314 PG P F +S +K TLN GS+A RVG+ FTL+E+ Sbjct: 464 PGWRPLFMHGAVLSSIANAKGGAQTLN--GSVAAFTRVGRRFTLSEI 508