BLASTX nr result

ID: Coptis21_contig00009804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009804
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534772.1| PREDICTED: probable receptor-like protein ki...    52   7e-09
ref|XP_003594535.1| Kinase-like protein [Medicago truncatula] gi...    51   3e-07
ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|2...    50   8e-06

>ref|XP_003534772.1| PREDICTED: probable receptor-like protein kinase At1g30570-like
           [Glycine max]
          Length = 852

 Score = 52.4 bits (124), Expect(2) = 7e-09
 Identities = 21/54 (38%), Positives = 35/54 (64%)
 Frame = +1

Query: 1   GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYCGQREK 162
           G+L+Y  +    G + +  K RA+WVGVG G+ S+A++A +  + FC+C  R+K
Sbjct: 408 GNLAYVERFDLGGNSGNKSKARAIWVGVGAGVASVAIVALIVGLVFCFCNGRKK 461



 Score = 32.3 bits (72), Expect(2) = 7e-09
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = +3

Query: 207 NDTTSAQGSKFPVGTLNFTGSMANNRVGKHFTLAEL 314
           N T  A+GS    GT    GS+ + RVGK FTLAE+
Sbjct: 485 NSTVGAKGS---AGTQKPYGSVGSTRVGKKFTLAEI 517


>ref|XP_003594535.1| Kinase-like protein [Medicago truncatula]
           gi|355483583|gb|AES64786.1| Kinase-like protein
           [Medicago truncatula]
          Length = 920

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = +1

Query: 1   GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYCGQREK 162
           G+L+Y  K   +G + S  K + LW+GVG GI S+A++A +    FC+C +R K
Sbjct: 404 GNLAYVEKFDLAGKSGSSSKAKVLWIGVGAGIASVAIVACVGVFVFCFCKRRRK 457



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 159 KNRSCQPG*CPFFTIR----NDTTSAQGSKFPVGTLNFTGSMANNRVGKHFTLAEL 314
           KN S  PG  P F       N T  A+GS    G     G++ +   GK FTLAE+
Sbjct: 463 KNNS--PGWRPIFLYGGAAVNSTVGAKGS---TGNQKLYGTVTSTGAGKRFTLAEI 513


>ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|222846310|gb|EEE83857.1|
           predicted protein [Populus trichocarpa]
          Length = 840

 Score = 49.7 bits (117), Expect(2) = 8e-06
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +1

Query: 1   GDLSYPSKPSSSGGNASGVKDRALWVGVGPGITSIALLAFLCTMFFCYC 147
           G+L+Y  +   +G +AS +K   LW+G+G G+ S  ++A  CT  FC+C
Sbjct: 401 GNLAYGDRIGPTGKSASHLKSWILWLGIGAGVASALIIAIACTCIFCFC 449



 Score = 24.6 bits (52), Expect(2) = 8e-06
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 177 PG*CPFFTIRNDTTSAQGSKFPVGTLNFTGSMAN-NRVGKHFTLAEL 314
           PG  P F      +S   +K    TLN  GS+A   RVG+ FTL+E+
Sbjct: 464 PGWRPLFMHGAVLSSIANAKGGAQTLN--GSVAAFTRVGRRFTLSEI 508


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