BLASTX nr result

ID: Coptis21_contig00009798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009798
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI15692.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002284072.1| PREDICTED: uncharacterized protein LOC100254...    63   3e-08
emb|CAN73358.1| hypothetical protein VITISV_012626 [Vitis vinifera]    63   3e-08
ref|XP_002514883.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|222841206|gb|EEE78753.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 8/70 (11%)
 Frame = +3

Query: 48  SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTT---NPFSFMEE--KKNCKRP---N 203
           SV+K LP  IL LAS+LSLED+EVLAY+I+RS+KTT   NP SF+++  KK+ K+P   N
Sbjct: 41  SVLKLLPAAILALASVLSLEDREVLAYMITRSLKTTITNNPSSFLQDSKKKSSKKPQNNN 100

Query: 204 TTTVRKHKSP 233
            +    H++P
Sbjct: 101 NSQTSNHRAP 110


>emb|CBI15692.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTTNPFSFME-EKKNCKRPN 203
           SV K LP TIL LAS LS++D+EVLAY+I+RS+ T NP S +E  KK CK P+
Sbjct: 54  SVFKLLPATILALASALSVDDREVLAYMITRSITTANPSSIIERHKKKCKTPH 106


>ref|XP_002284072.1| PREDICTED: uncharacterized protein LOC100254413 [Vitis vinifera]
          Length = 230

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTTNPFSFME-EKKNCKRPN 203
           SV K LP TIL LAS LS++D+EVLAY+I+RS+ T NP S +E  KK CK P+
Sbjct: 25  SVFKLLPATILALASALSVDDREVLAYMITRSITTANPSSIIERHKKKCKTPH 77


>emb|CAN73358.1| hypothetical protein VITISV_012626 [Vitis vinifera]
          Length = 176

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTTNPFSFME-EKKNCKRPN 203
           SV K LP TIL LAS LS++D+EVLAY+I+RS+ T NP S +E  KK CK P+
Sbjct: 25  SVFKLLPATILALASALSVDDREVLAYMITRSITTANPSSIIERHKKKCKTPH 77


>ref|XP_002514883.1| conserved hypothetical protein [Ricinus communis]
           gi|223545934|gb|EEF47437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
 Frame = +3

Query: 48  SVIKFLPPTILTLASILSLEDKEVLAYLISRSMK-TTNP----FSFME--EKKNCKRPNT 206
           SV+K LP TILTLAS+LSL+D+EVLAY+I+RS+K TTNP     S ++  +KK+ K  + 
Sbjct: 38  SVLKLLPATILTLASVLSLQDREVLAYMITRSLKTTTNPTPKQASLLQGSKKKSTKNKSP 97

Query: 207 TTVRKHKSP 233
            T   HKSP
Sbjct: 98  NT---HKSP 103


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