BLASTX nr result

ID: Coptis21_contig00009782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009782
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522187.1| conserved hypothetical protein [Ricinus comm...    64   2e-17
emb|CBI37596.3| unnamed protein product [Vitis vinifera]               56   2e-13
ref|XP_002276481.1| PREDICTED: uncharacterized protein LOC100245...    56   2e-13
emb|CAN75294.1| hypothetical protein VITISV_042414 [Vitis vinifera]    56   2e-13
ref|XP_002331892.1| predicted protein [Populus trichocarpa] gi|2...    50   6e-13

>ref|XP_002522187.1| conserved hypothetical protein [Ricinus communis]
           gi|223538558|gb|EEF40162.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score = 64.3 bits (155), Expect(2) = 2e-17
 Identities = 37/78 (47%), Positives = 46/78 (58%)
 Frame = +2

Query: 476 SNLEPMXXXXXXXXXXXDIDPVGFEPSGQERLFPSSWNSRREGFMSETKSERIIERWIVQ 655
           SNLEPM           D DP+   P    + F  +WN  +E    E KS +IIERWI+Q
Sbjct: 75  SNLEPMIVDVILVERPLDWDPLNTSP---RKDFGRNWNFDQEELGCEVKSGKIIERWILQ 131

Query: 656 YESRKSGKDSGHGNKRSG 709
           YESR+S KDSG G++RSG
Sbjct: 132 YESRRS-KDSGSGSRRSG 148



 Score = 50.4 bits (119), Expect(2) = 2e-17
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +1

Query: 412 KWFNLALKECPAALENLDLWRQ 477
           KWFNLAL+ECPAALENLD+WRQ
Sbjct: 53  KWFNLALRECPAALENLDIWRQ 74


>emb|CBI37596.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 55.8 bits (133), Expect(2) = 2e-13
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +2

Query: 476 SNLEPMXXXXXXXXXXXDIDPVGFEP-------SGQERLFPSSWNSRREGFMSETKSERI 634
           SNLEPM           D DP+   P       +  +    +SW S +E F    KSE+I
Sbjct: 87  SNLEPMVVDVILVQRPHDWDPINCIPRRDLLRNTSLKEQSRNSWGSEQEEFGCVAKSEKI 146

Query: 635 IERWIVQYESRKSGKDSGHGNKRS 706
           IERW+VQYESR   K+S  G+KRS
Sbjct: 147 IERWVVQYESR---KNSSLGSKRS 167



 Score = 45.4 bits (106), Expect(2) = 2e-13
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 412 KWFNLALKECPAALENLDLWRQ 477
           KWF LAL++CPAALEN+D WRQ
Sbjct: 65  KWFRLALRDCPAALENIDFWRQ 86


>ref|XP_002276481.1| PREDICTED: uncharacterized protein LOC100245377 [Vitis vinifera]
          Length = 654

 Score = 55.8 bits (133), Expect(2) = 2e-13
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +2

Query: 476 SNLEPMXXXXXXXXXXXDIDPVGFEP-------SGQERLFPSSWNSRREGFMSETKSERI 634
           SNLEPM           D DP+   P       +  +    +SW S +E F    KSE+I
Sbjct: 81  SNLEPMVVDVILVQRPHDWDPINCIPRRDLLRNTSLKEQSRNSWGSEQEEFGCVAKSEKI 140

Query: 635 IERWIVQYESRKSGKDSGHGNKRS 706
           IERW+VQYESR   K+S  G+KRS
Sbjct: 141 IERWVVQYESR---KNSSLGSKRS 161



 Score = 45.4 bits (106), Expect(2) = 2e-13
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 412 KWFNLALKECPAALENLDLWRQ 477
           KWF LAL++CPAALEN+D WRQ
Sbjct: 59  KWFRLALRDCPAALENIDFWRQ 80


>emb|CAN75294.1| hypothetical protein VITISV_042414 [Vitis vinifera]
          Length = 638

 Score = 55.8 bits (133), Expect(2) = 2e-13
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +2

Query: 476 SNLEPMXXXXXXXXXXXDIDPVGFEP-------SGQERLFPSSWNSRREGFMSETKSERI 634
           SNLEPM           D DP+   P       +  +    +SW S +E F    KSE+I
Sbjct: 52  SNLEPMVVDVILVQRPHDWDPINCIPRRDLLRNTSLKEQSRNSWGSEQEEFGCVAKSEKI 111

Query: 635 IERWIVQYESRKSGKDSGHGNKRS 706
           IERW+VQYESR   K+S  G+KRS
Sbjct: 112 IERWVVQYESR---KNSSLGSKRS 132



 Score = 45.4 bits (106), Expect(2) = 2e-13
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 412 KWFNLALKECPAALENLDLWRQ 477
           KWF LAL++CPAALEN+D WRQ
Sbjct: 30  KWFRLALRDCPAALENIDFWRQ 51


>ref|XP_002331892.1| predicted protein [Populus trichocarpa] gi|222874641|gb|EEF11772.1|
           predicted protein [Populus trichocarpa]
          Length = 614

 Score = 50.4 bits (119), Expect(2) = 6e-13
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
 Frame = +2

Query: 533 DPVGFEPSGQ-------ERLFPSSWNSRREGFMSETKSERIIERWIVQYESRKSGKDSGH 691
           DPV + P  +       +  +P  WNS +E    E K E+I+ERW VQYE RKS +DSG 
Sbjct: 110 DPVNYPPQREPVRNFSTKDQYPFHWNSDQEELGCEGKIEKIVERWEVQYEGRKS-RDSGT 168

Query: 692 GNKR 703
           G+++
Sbjct: 169 GSRK 172



 Score = 49.3 bits (116), Expect(2) = 6e-13
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 412 KWFNLALKECPAALENLDLWRQ 477
           KWFNLAL+ECPAALENLDLW Q
Sbjct: 68  KWFNLALRECPAALENLDLWHQ 89


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