BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009765
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   113   2e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   112   4e-23
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    99   4e-19
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    95   8e-18

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  113 bits (283), Expect = 2e-23
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
 Frame = -3

Query: 596 CDLNHPHPKLSVVAAAPDSYGIGNMVEERYLVELSGDLILIKRVRDFVGESLTDN----Y 429
           CD++   P++S++   P  +G G++   +YLVE   +L+L+ R  D   +   D     Y
Sbjct: 231 CDVSGSSPRVSIIEM-PQQFG-GDL---QYLVESGEELLLVTRYLDLTYDVEXDQTSLIY 285

Query: 428 LTHGFLVFKLDQLEVKWIEVKSLGGRSVFLGANSPVSLPALEFPGCKPDCIYFTDDYAEV 249
            T  F V +LD    +W  V SLG R++FLG N  +SL +++FPGCK +CIY+TDDY+E 
Sbjct: 286 RTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE- 344

Query: 248 YMNDLPHGI-GPHDMGVFSLEDGTLEPHYQMDGDMTFPPPIWVEP 117
              D   GI G  D+G+F+LEDG++EP       + +PPP+WV P
Sbjct: 345 ---DNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  112 bits (281), Expect = 4e-23
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
 Frame = -3

Query: 596 CDLNHPHPKLSVVAAAPDSYGIGNMVEERYLVELSGDLILIKRVRDFVGESLTDN----Y 429
           CD++   P++S++   P  +G G++   +YLVE   +L+L+ R  D   +   D     Y
Sbjct: 231 CDVSGSSPRVSIIEM-PQQFG-GDL---QYLVESGEELLLVTRYLDLTYDVEPDQTSLIY 285

Query: 428 LTHGFLVFKLDQLEVKWIEVKSLGGRSVFLGANSPVSLPALEFPGCKPDCIYFTDDYAEV 249
            T  F V +LD    +W  V SLG R++FLG N  +SL +++FPGCK +CIY+TDDY+E 
Sbjct: 286 RTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE- 344

Query: 248 YMNDLPHGI-GPHDMGVFSLEDGTLEPHYQMDGDMTFPPPIWVEP 117
              D   GI G  D+G+F+LEDG++EP       + +PPP+WV P
Sbjct: 345 ---DNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  103 bits (257), Expect = 2e-20
 Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
 Frame = -3

Query: 596 CDLNHPHPKLSVVAAAPDSYGIGNMVEERYLVELSGDLILIKRVRDFVGESLTDNYLTHG 417
           CD+N   PK+S +   P   G G+M   +YLV     L+L+ R  D   E     Y T  
Sbjct: 235 CDVNGNSPKVSFIET-PRQIG-GDM---QYLVSSGDGLLLVTRYLDLDVEFDIFIYKTAR 289

Query: 416 FLVFKLDQLEVKWIEVKSLGGRSVFLGANSPVSLPALEFPGCKPDCIYFTDDYAEVYMND 237
           F VFKLD    +W  V SLG   +F+G NS ++L A    GC  DCIY+TDDY+    N+
Sbjct: 290 FEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS---ANN 346

Query: 236 LPHGIGPHDMGVFSLEDGTLEP----HYQMDGDMTFPPPIWVEP 117
               IG HD+G+F L DG++EP           + +PPP+W+ P
Sbjct: 347 YDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
 Frame = -3

Query: 575 PKLSVVAAAPDSYGIGNMVEERYLVELSGDLILIKRV-----RDFVGESLTDNYLTHGFL 411
           P++S++         G++    Y V  +GD++L+ RV      D  GE     Y T GF 
Sbjct: 235 PRVSIIQTTTPFGFAGDI---HYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFE 291

Query: 410 VFKLDQLEVKWIEVKSLGGRSVFLGANSPVSLPALEFPGCKPDCIYFTDDYAEVYMNDLP 231
           VFK++   + W  V++LG R +F+G NS +S  A +F GC  DCIYFTDDY+E   +D  
Sbjct: 292 VFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDD-- 349

Query: 230 HGIGPHDMGVFSLEDGTLEP----HYQMDGDMTFPPPIWVEP 117
              G HD+GVF L D ++EP    +      + +P PIWV P
Sbjct: 350 -ACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
 Frame = -3

Query: 596 CDLNHPHPKLSVVAAAPDSYGIGNMVEERYLVELSGDLILIKRVRDFVGESLTDN----- 432
           CD++   P++S +     + G     + +YLV    +L+L+ R  D   E    +     
Sbjct: 234 CDISSDSPRVSFMETPRQAGG-----DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHL 288

Query: 431 -YLTHGFLVFKLDQLEVKWIEVKSLGGRSVFLGANSPVSLPALEFPGCKPDCIYFTDDYA 255
            Y T  F VF+LD    +W+ + +LG +++F+G NS +SL A +F GC  +CIY+TDDY 
Sbjct: 289 IYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYL 348

Query: 254 EVYMNDLPHGIGPHDMGVFSLEDGTLEPHYQMDGDMTFP----PPIWVEP 117
           +    +     G HD+G+F L D T+EP      + T P    PP+WV P
Sbjct: 349 DA---NYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395