BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009751
         (3498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...  1435   0.0  
emb|CBI19841.3| unnamed protein product [Vitis vinifera]             1377   0.0  
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co...  1347   0.0  
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi...  1338   0.0  
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g...  1338   0.0  

>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score = 1435 bits (3714), Expect = 0.0
 Identities = 731/1083 (67%), Positives = 817/1083 (75%), Gaps = 23/1083 (2%)
 Frame = +3

Query: 81   MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 260
            MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 261  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 440
            PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTQFMAVLSIALQYYIHQ 620
                                  GRKLPPKQ+SQVCDSNVITPGT+FM VLS+ALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180

Query: 621  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 800
            RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240

Query: 801  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKVGQFDEKGEGSTLDKK 977
            LATHEVHFSILRE+VFT  QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK
Sbjct: 241  LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300

Query: 978  PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1157
            PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1158 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1337
            INLL+AVYKKE  AMGGYLTDSSK  LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 361  INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420

Query: 1338 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1517
            REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA  PSPYQ  E        ++  + G
Sbjct: 421  REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472

Query: 1518 TSKGKKSDIRNNKVPR-SSEASVGAAIVEAENSLEMETRENKEELKTKLKDLIREKSDLF 1694
            TS  +       KV R SS A+VGAAIVEAEN LE E  +NK+ELK KLK+L+REKSDLF
Sbjct: 473  TSGSQ-----GRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527

Query: 1695 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1874
            NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV
Sbjct: 528  NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587

Query: 1875 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2054
            CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM
Sbjct: 588  CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647

Query: 2055 TSSSSPIVDFYPADFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLTEEEVRRNS 2234
            T  +SPI+DFYP DFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTLTEEE RRNS
Sbjct: 648  TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707

Query: 2235 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKKRAEVKEIIDPKASGGMNGYLALCNEDPC 2414
            VM DMLFV +SHPLSPYIFSL D+ K+L+D +R EVKE +DP+ASGGMNGY++LC  DPC
Sbjct: 708  VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767

Query: 2415 PSIFRSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPAGVIFPKKIVAVGDLRPPPALWH 2594
            P IFRSP+  LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH
Sbjct: 768  PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827

Query: 2595 EDTGKKPWE--RQNRSGTNSGRQHSEDAHRLVTNSLQIKTGPSGVQQMHQSQLPYGTSLY 2768
            ED G++PWE  RQN  GT SGRQ  E AHRLV NSLQ+K   +G      +  PY  + Y
Sbjct: 828  EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAERNGFGDQMHAPPPYPAAPY 887

Query: 2769 G--LHPHQNGKHNNQEHQRSV---PPYNNRLVNSSFRGYEPPDGSVHQNASSSLYERSNS 2933
            G  L  + + +++NQEH R     P Y+++    S       +   H+         +  
Sbjct: 888  GPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATGH 947

Query: 2934 LYGRNNWPATQRRDPPVHG-HGTGSFQNPQLQYR-QHVAPPPMIANSHVHPRGGYNGNH- 3104
             Y R+          PVHG +  G  QN    Y  +  A   + A + +  +GG+N +H 
Sbjct: 948  HYNRS----------PVHGYYQPGFHQNDGPGYHPRQEAQTHIPAGAQLPGQGGHNSHHG 997

Query: 3105 -QAYGSSSNHQRGGRQAPAANN----------RGFSRDYNHPQHQGNLYANLGRGANGRP 3251
             Q+YG+SS H+      P  NN          +G  R Y HPQ  GN Y+ L R AN  P
Sbjct: 998  YQSYGASSYHEWASGWPPEGNNQSNPRGHGHPQGNPRGYGHPQQLGNQYSVLDRRANRGP 1057

Query: 3252 PPP 3260
            PPP
Sbjct: 1058 PPP 1060


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score = 1377 bits (3564), Expect = 0.0
 Identities = 676/883 (76%), Positives = 734/883 (83%), Gaps = 4/883 (0%)
 Frame = +3

Query: 81   MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 260
            MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 261  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 440
            PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTQFMAVLSIALQYYIHQ 620
                                  GRKLPPKQ+SQVCDSNVITPGT+FM VLS+ALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180

Query: 621  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 800
            RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240

Query: 801  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKVGQFDEKGEGSTLDKK 977
            LATHEVHFSILRE+VFT  QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK
Sbjct: 241  LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300

Query: 978  PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1157
            PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1158 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1337
            INLL+AVYKKE  AMGGYLTDSSK  LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 361  INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420

Query: 1338 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1517
            REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA  PSPYQ  E        ++  + G
Sbjct: 421  REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472

Query: 1518 TSKGKKSDIRNNKVPR-SSEASVGAAIVEAENSLEMETRENKEELKTKLKDLIREKSDLF 1694
            TS  +       KV R SS A+VGAAIVEAEN LE E  +NK+ELK KLK+L+REKSDLF
Sbjct: 473  TSGSQ-----GRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527

Query: 1695 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1874
            NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV
Sbjct: 528  NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587

Query: 1875 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2054
            CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM
Sbjct: 588  CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647

Query: 2055 TSSSSPIVDFYPADFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLTEEEVRRNS 2234
            T  +SPI+DFYP DFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTLTEEE RRNS
Sbjct: 648  TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707

Query: 2235 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKKRAEVKEIIDPKASGGMNGYLALCNEDPC 2414
            VM DMLFV +SHPLSPYIFSL D+ K+L+D +R EVKE +DP+ASGGMNGY++LC  DPC
Sbjct: 708  VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767

Query: 2415 PSIFRSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPAGVIFPKKIVAVGDLRPPPALWH 2594
            P IFRSP+  LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH
Sbjct: 768  PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827

Query: 2595 EDTGKKPWE--RQNRSGTNSGRQHSEDAHRLVTNSLQIKTGPS 2717
            ED G++PWE  RQN  GT SGRQ  E AHRLV NSLQ+K  PS
Sbjct: 828  EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAEPS 870


>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1113

 Score = 1347 bits (3485), Expect = 0.0
 Identities = 700/1102 (63%), Positives = 806/1102 (73%), Gaps = 41/1102 (3%)
 Frame = +3

Query: 81   MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 260
            MGVPAFYRWLAEKY                GVKIPVD ++PNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60

Query: 261  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 440
            PCFHPEDRPSPT+F+EVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTQFMAVLSIALQYYIHQ 620
                                  GRKLPPK+ SQV DSN+ITPGT+FMAVLSIALQYYIH 
Sbjct: 121  AAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHL 180

Query: 621  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 800
            RLNNDPGWK +KVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240

Query: 801  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKVGQFDEKGEGSTLDKK 977
            LATHE+HFSILRE+VFT  QQDKCFLCGQ+GHLAA+CEGKAKRK G+FDEKG+   + KK
Sbjct: 241  LATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKK 300

Query: 978  PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1157
            PYQFLNIWTLREYL  EMRIPN PF+IDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1158 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1337
            INLL+AVYKKEF AMGGYLTD  K  LS+VEHFIQAVG YEDKIFQKRARLHQRQ++RIK
Sbjct: 361  INLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 420

Query: 1338 REKGQTR--RGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNE 1511
            REK Q+R  RGDD +PQ +PESLVPVA + GSRL+SA  PSP+Q    +  +   V    
Sbjct: 421  REKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHS--LEAADLDVRSAH 478

Query: 1512 VGTSKGKKSDIRNNKVPR-SSEASVGAAIVEAENSLEMETRENKEELKTKLKDLIREKSD 1688
                 GK S ++ +KV R SS ASVGAAIVEAENSLE+E  ENK+ELK KLK+++REKSD
Sbjct: 479  FSALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAKLKEILREKSD 538

Query: 1689 LFNSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYE 1868
             FNS N EEDK++LGDPGWKERYYEEKFS K+ +ELE IR+DVVLRYTEGLCWVMHYYYE
Sbjct: 539  AFNSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGLCWVMHYYYE 598

Query: 1869 GVCSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRE 2048
            GVCSWQWFYPYHYAPFASD+K L QL+I FELGSPFKPFNQL+GVFPAAS HALP HYR+
Sbjct: 599  GVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAASSHALPVHYRK 658

Query: 2049 LMTSSSSPIVDFYPADFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLTEEEVRR 2228
            LM+  +SPI+DFYP DFEVDMNGKR+AWQGIAKLPFIDE RLL E+ K+EHTLTEEE RR
Sbjct: 659  LMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHTLTEEEARR 718

Query: 2229 NSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKKRAEVKEIIDPKASGGMNGYLALCNED 2408
            NS M DMLFV  SH L+  I+ L +  KQL+D++R EVKE I+P+ S GMNGY++ C+ D
Sbjct: 719  NSAMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDGMNGYISPCSGD 778

Query: 2409 PCPSIFRSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPAGVIFPKKIVAVGDLRPPPAL 2588
              P IFRSPV G+EDI++N VI AIY LPD HKH+TRPPAGVIFPKKIV V DL+P P L
Sbjct: 779  THPPIFRSPVAGMEDILDNGVICAIYRLPDPHKHVTRPPAGVIFPKKIVNVVDLKPDPVL 838

Query: 2589 WHEDTGKKPWE--RQNRSGTNSGRQHSEDAHRLVTNSLQIKTGPSG-VQQMHQSQLPY-G 2756
            WHED+G+KPWE  R+N  GT SGRQ  E +HRLV NSLQ+K   +G    +H    PY  
Sbjct: 839  WHEDSGRKPWESDRRNPPGTISGRQLGEASHRLVVNSLQMKVDHNGYANHLHAPIPPYAA 898

Query: 2757 TSLYGLH-PHQNGKHNNQEHQRSVPPYN------NRLVNSS--------FRGYEPPDGSV 2891
            T+   +H  + NG H+ +  +   P  +      NR  N +         + Y  P G+ 
Sbjct: 899  TAHVPVHSSYANGSHDPRRDRTGQPRMDYSHAGQNRFFNPTQYNNNHGYGQSYASP-GNA 957

Query: 2892 HQNASSSLYERSNSLYGRNNWPATQR----RDPPVHGHGTGSFQNPQLQYRQHVAPPPMI 3059
            H + S   YER N   G+++     +    ++ P + HG+ +  +    Y+         
Sbjct: 958  HFSGSRPQYERENRSNGQHSRQVYLQPEFHQNGPRYLHGSMAGTSESYAYQDDYDG---- 1013

Query: 3060 ANSHVHPRGGYNGNHQAYGSSSNHQRGGRQAPAANNRGFSRDYNHPQHQGNLYANL---- 3227
              SH  PR             ++HQ+ G   P   N  F R Y+  Q +GN Y+ L    
Sbjct: 1014 YQSHQPPR------------DASHQQWGNGLPPPVNLNFPRGYDQSQQRGNRYSVLETRG 1061

Query: 3228 --------GRGANGRPP--PPH 3263
                      G + RPP  PPH
Sbjct: 1062 SRNPQLPGASGLDRRPPPQPPH 1083


>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
          Length = 1068

 Score = 1338 bits (3463), Expect = 0.0
 Identities = 689/1091 (63%), Positives = 790/1091 (72%), Gaps = 30/1091 (2%)
 Frame = +3

Query: 81   MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 260
            MGVPAFYRWLAEKY                GVK+PVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 261  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 440
            PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTQFMAVLSIALQYYIHQ 620
                                  GRKLPPKQ+SQ CDSNVITPGT+FMAVLSIALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180

Query: 621  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 800
            RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML 
Sbjct: 181  RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240

Query: 801  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKVGQFDEKGEGSTLDKK 977
            LATHEVHFSILREVV+T  QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK
Sbjct: 241  LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299

Query: 978  PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1157
            PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300  PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359

Query: 1158 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1337
            INLL+AVYKKEF +MGGYLTD+    L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 360  INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419

Query: 1338 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1517
            REK Q +RGDD++P  + + +VPVA ++GSRL+S   PSPY+       +GS  +KN   
Sbjct: 420  REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYE------QNGS--DKN--- 468

Query: 1518 TSKGKKSDIRNNKVPRSSEASVGAAIVEAENSLEMETRENKEELKTKLKDLIREKSDLFN 1697
             + GK S  R      SS +S+ AAIVEAEN LE + RENKE+LKT LKD +REKSD+FN
Sbjct: 469  -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527

Query: 1698 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1877
            S N EEDK+KLG+PGW+ERYYEEKF A++  ++E IR+DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 528  SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587

Query: 1878 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2057
            SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP  YR+LMT
Sbjct: 588  SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647

Query: 2058 SSSSPIVDFYPADFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLTEEEVRRNSV 2237
             ++SPI+DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTLT EE RRNS+
Sbjct: 648  DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707

Query: 2238 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKKRAEVKEIIDPKASGGMNGYLALCNEDPCP 2417
            M +MLFV  SHPLSPYI+SL+ K   L D++R E+KE IDP +SGGMNGY++LC+ DPCP
Sbjct: 708  MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767

Query: 2418 SIFRSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPAGVIFPKKIVAVGDLRPPPALWHE 2597
             +FRSPV+GLEDIM+N VI  IY LPD+HKHI RPP GVI PKK V   DL+PPP LWHE
Sbjct: 768  PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827

Query: 2598 DTGKKPWE-----------RQNRSGTNSGRQHSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2744
            D+G++P +           RQN +G  SGRQ  E AHRLV NSL  ++G     Q +   
Sbjct: 828  DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883

Query: 2745 LPYGTSLYGLHPHQNGKHNNQEHQRSVPPYNNRLVNSSF-RGYEPPDGSVHQNASS-SLY 2918
            +PY T + G+ P+ NG     E           L N      Y    G   ++ S  S Y
Sbjct: 884  MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQKDRSGPSQY 942

Query: 2919 ERSNS---LYGRNNWPATQRRDPPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3080
             R N     Y R+N   ++ R PP H  G  S+Q+   P     Q+  PPP         
Sbjct: 943  GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGQYAQPPPY-------- 994

Query: 3081 RGGYNGNHQ--AYGSSSNHQRGGRQ--------APAANNRGFSRDYNHPQHQGNLYANLG 3230
             GGY  ++Q   YG     Q+  +Q         P       +R  + PQ   N Y  L 
Sbjct: 995  AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054

Query: 3231 RGANGRPPPPH 3263
            R +N RPPP H
Sbjct: 1055 RNSNRRPPPGH 1065


>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
            gi|56785082|dbj|BAD82721.1| putative 5'-3'
            exoribonuclease (XRN3) [Oryza sativa Japonica Group]
            gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
            Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1068

 Score = 1338 bits (3462), Expect = 0.0
 Identities = 688/1091 (63%), Positives = 790/1091 (72%), Gaps = 30/1091 (2%)
 Frame = +3

Query: 81   MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 260
            MGVPAFYRWLAEKY                GVK+PVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 261  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 440
            PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTQFMAVLSIALQYYIHQ 620
                                  GRKLPPKQ+SQ CDSNVITPGT+FMAVLSIALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180

Query: 621  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 800
            RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML 
Sbjct: 181  RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240

Query: 801  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKVGQFDEKGEGSTLDKK 977
            LATHEVHFSILREVV+T  QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK
Sbjct: 241  LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299

Query: 978  PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1157
            PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300  PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359

Query: 1158 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1337
            INLL+AVYKKEF +MGGYLTD+    L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 360  INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419

Query: 1338 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1517
            REK Q +RGDD++P  + + +VPVA ++GSRL+S  +PSPY+       +GS  +KN   
Sbjct: 420  REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYE------QNGS--DKN--- 468

Query: 1518 TSKGKKSDIRNNKVPRSSEASVGAAIVEAENSLEMETRENKEELKTKLKDLIREKSDLFN 1697
             + GK S  R      SS +S+ AAIVEAEN LE + RENKE+LKT LKD +REKSD+FN
Sbjct: 469  -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527

Query: 1698 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1877
            S N EEDK+KLG+PGW+ERYYEEKF A++  ++E IR+DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 528  SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587

Query: 1878 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2057
            SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP  YR+LMT
Sbjct: 588  SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647

Query: 2058 SSSSPIVDFYPADFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLTEEEVRRNSV 2237
             ++SPI+DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTLT EE RRNS+
Sbjct: 648  DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707

Query: 2238 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKKRAEVKEIIDPKASGGMNGYLALCNEDPCP 2417
            M +MLFV  SHPLSPYI+SL+ K   L D++R E+KE IDP +SGGMNGY++LC+ DPCP
Sbjct: 708  MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767

Query: 2418 SIFRSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPAGVIFPKKIVAVGDLRPPPALWHE 2597
             +FRSPV+GLEDIM+N VI  IY LPD+HKHI RPP GVI PKK V   DL+PPP LWHE
Sbjct: 768  PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827

Query: 2598 DTGKKPWE-----------RQNRSGTNSGRQHSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2744
            D+G++P +           RQN +G  SGRQ  E AHRLV NSL  ++G     Q +   
Sbjct: 828  DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883

Query: 2745 LPYGTSLYGLHPHQNGKHNNQEHQRSVPPYNNRLVNSSFRGYEPPDGSVHQNASS--SLY 2918
            +PY T + G+ P+ NG     E           L N             +QN  S  S Y
Sbjct: 884  MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQNDRSGPSQY 942

Query: 2919 ERSNS---LYGRNNWPATQRRDPPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3080
             R N     Y R+N   ++ R PP H  G  S+Q+   P     ++  PPP         
Sbjct: 943  GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGRYAQPPPY-------- 994

Query: 3081 RGGYNGNHQ--AYGSSSNHQRGGRQ--------APAANNRGFSRDYNHPQHQGNLYANLG 3230
             GGY  ++Q   YG     Q+  +Q         P       +R  + PQ   N Y  L 
Sbjct: 995  AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054

Query: 3231 RGANGRPPPPH 3263
            R +N RPPP H
Sbjct: 1055 RNSNRRPPPGH 1065