BLASTX nr result
ID: Coptis21_contig00009744
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009744 (1460 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26949.3| unnamed protein product [Vitis vinifera] 556 e-156 ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica... 556 e-156 ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2... 549 e-154 ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu... 544 e-152 ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica... 542 e-152 >emb|CBI26949.3| unnamed protein product [Vitis vinifera] Length = 1181 Score = 556 bits (1432), Expect = e-156 Identities = 277/424 (65%), Positives = 334/424 (78%) Frame = -2 Query: 1459 EKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPILTVVAGLSVRDPFLMPTDKKDLAEH 1280 E LT+LGRHL++LP+EP+LGKMLI+GA+FNCLDPILT+VAGLSVRDPFL P DKKDLAE Sbjct: 759 ENLTVLGRHLTMLPMEPKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEA 818 Query: 1279 AKAQFAAGDYSDHLALIRAYEGWKNAEREYSGPDYCWKNFLSSPMLKAIDSLRKEFICIL 1100 AKAQF+ DYSDHLAL+RAYEGWK+AE++ G +YCWKNFLS+ +KAIDSLRKEF +L Sbjct: 819 AKAQFSH-DYSDHLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLL 877 Query: 1099 KDTGVVDDDLHIYNLWNNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSN 920 KDT +VD ++ YN W+ D LIRAVIC GL+PGICSVV E S SLKTMEDG+VLL+SN Sbjct: 878 KDTDLVDGNMATYNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSN 937 Query: 919 SVNGRESNIPYPWLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDGHLKMLGGY 740 SVN RE IPYPWLVFNEK+KVNSVFLRDSTA+SDS+LLLFGG + RGD DGHLKMLGGY Sbjct: 938 SVNARECKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGY 997 Query: 739 LEFFMKPTLAETYTNLKRGLEKIIQIKLLNPKMNIEIHRELLSAVRLLITEDQCDGRFVF 560 LEFFMKP +AE Y +L+R L+++IQ KLLNP+M I ++ ELLSAVRLLI+EDQCDGRFVF Sbjct: 998 LEFFMKPAIAEMYQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVF 1057 Query: 559 GHQILKXXXXXXXXXXXXXXXXSRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVK 380 HQ+ + + GDN+K+QLQTL+TRAG+ P YK +K Sbjct: 1058 SHQVGRQVVKPSKTSVTVMPKALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLK 1117 Query: 379 NNQFQAMVEINGMQFTGQPCNNRKLAEKDAAAQALLSLTGRLQACPVDIERISLLLKQKR 200 NNQF++ VE NGMQ GQPCNN+K AEKDAAA+AL L G Q+ I+ +S+LLK+ + Sbjct: 1118 NNQFRSTVEFNGMQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKKSK 1177 Query: 199 KHHQ 188 K H+ Sbjct: 1178 KDHK 1181 >ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis vinifera] Length = 1195 Score = 556 bits (1432), Expect = e-156 Identities = 277/424 (65%), Positives = 334/424 (78%) Frame = -2 Query: 1459 EKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPILTVVAGLSVRDPFLMPTDKKDLAEH 1280 E LT+LGRHL++LP+EP+LGKMLI+GA+FNCLDPILT+VAGLSVRDPFL P DKKDLAE Sbjct: 773 ENLTVLGRHLTMLPMEPKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEA 832 Query: 1279 AKAQFAAGDYSDHLALIRAYEGWKNAEREYSGPDYCWKNFLSSPMLKAIDSLRKEFICIL 1100 AKAQF+ DYSDHLAL+RAYEGWK+AE++ G +YCWKNFLS+ +KAIDSLRKEF +L Sbjct: 833 AKAQFSH-DYSDHLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLL 891 Query: 1099 KDTGVVDDDLHIYNLWNNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSN 920 KDT +VD ++ YN W+ D LIRAVIC GL+PGICSVV E S SLKTMEDG+VLL+SN Sbjct: 892 KDTDLVDGNMATYNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSN 951 Query: 919 SVNGRESNIPYPWLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDGHLKMLGGY 740 SVN RE IPYPWLVFNEK+KVNSVFLRDSTA+SDS+LLLFGG + RGD DGHLKMLGGY Sbjct: 952 SVNARECKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGY 1011 Query: 739 LEFFMKPTLAETYTNLKRGLEKIIQIKLLNPKMNIEIHRELLSAVRLLITEDQCDGRFVF 560 LEFFMKP +AE Y +L+R L+++IQ KLLNP+M I ++ ELLSAVRLLI+EDQCDGRFVF Sbjct: 1012 LEFFMKPAIAEMYQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVF 1071 Query: 559 GHQILKXXXXXXXXXXXXXXXXSRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVK 380 HQ+ + + GDN+K+QLQTL+TRAG+ P YK +K Sbjct: 1072 SHQVGRQVVKPSKTSVTVMPKALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLK 1131 Query: 379 NNQFQAMVEINGMQFTGQPCNNRKLAEKDAAAQALLSLTGRLQACPVDIERISLLLKQKR 200 NNQF++ VE NGMQ GQPCNN+K AEKDAAA+AL L G Q+ I+ +S+LLK+ + Sbjct: 1132 NNQFRSTVEFNGMQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKKSK 1191 Query: 199 KHHQ 188 K H+ Sbjct: 1192 KDHK 1195 >ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1| predicted protein [Populus trichocarpa] Length = 1053 Score = 549 bits (1415), Expect = e-154 Identities = 275/423 (65%), Positives = 334/423 (78%) Frame = -2 Query: 1459 EKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPILTVVAGLSVRDPFLMPTDKKDLAEH 1280 E LT+LGR+L++LPVEP+LGKML++GAI NCLDP+LTVVAGLSVRDPFLMP DKKDLAE Sbjct: 635 ENLTVLGRYLTMLPVEPKLGKMLVLGAILNCLDPVLTVVAGLSVRDPFLMPLDKKDLAEA 694 Query: 1279 AKAQFAAGDYSDHLALIRAYEGWKNAEREYSGPDYCWKNFLSSPMLKAIDSLRKEFICIL 1100 AK+QF+ GDYSDHLAL+RAYEGWK+AER+ SG +YCWKNFLS +KAIDSLRKEF +L Sbjct: 695 AKSQFS-GDYSDHLALVRAYEGWKDAERDLSGYEYCWKNFLSVQSMKAIDSLRKEFFSLL 753 Query: 1099 KDTGVVDDDLHIYNLWNNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSN 920 DTG+VD + N W++D L+RAVIC+GL+PGICS+V+ E S SLKTMEDG+VLL+SN Sbjct: 754 MDTGLVDGNPTTCNAWSHDEHLVRAVICSGLYPGICSIVHNEKSFSLKTMEDGQVLLHSN 813 Query: 919 SVNGRESNIPYPWLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDGHLKMLGGY 740 SVN RES IPYPWLVFNEK+KVNSVFLRDSTA+SDS+LLLFGG +SRGD DGHLKMLGG+ Sbjct: 814 SVNARESKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGSISRGDADGHLKMLGGF 873 Query: 739 LEFFMKPTLAETYTNLKRGLEKIIQIKLLNPKMNIEIHRELLSAVRLLITEDQCDGRFVF 560 LEF+M+P++AE Y +L+R L+++IQ KLLNP+M+I +H ELLSAVRLL++ED CDGRFVF Sbjct: 874 LEFYMQPSVAEMYQSLRRELDELIQTKLLNPRMDIHMHHELLSAVRLLVSEDNCDGRFVF 933 Query: 559 GHQILKXXXXXXXXXXXXXXXXSRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVK 380 G K + GDN+K+QLQTL+TRAG+ P YK +K Sbjct: 934 GCHFFKSSKPAVFATQPTLI----SRGDSGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLK 989 Query: 379 NNQFQAMVEINGMQFTGQPCNNRKLAEKDAAAQALLSLTGRLQACPVDIERISLLLKQKR 200 NNQF+A VE NGMQ GQPCNN+K AEKDAAA+AL L G Q I +S+LLK+ + Sbjct: 990 NNQFRATVEFNGMQIMGQPCNNKKSAEKDAAAEALQWLVGGTQTSQEYINHMSMLLKKSK 1049 Query: 199 KHH 191 K H Sbjct: 1050 KDH 1052 >ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1172 Score = 544 bits (1402), Expect = e-152 Identities = 266/423 (62%), Positives = 335/423 (79%) Frame = -2 Query: 1459 EKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPILTVVAGLSVRDPFLMPTDKKDLAEH 1280 E LT+LG++L++ P++P+LGKMLI+GAIFNCLDP+LT+VAGLSVRDPFL P DKKDLAE Sbjct: 754 ENLTVLGKYLTMFPMQPKLGKMLILGAIFNCLDPVLTIVAGLSVRDPFLTPMDKKDLAEA 813 Query: 1279 AKAQFAAGDYSDHLALIRAYEGWKNAEREYSGPDYCWKNFLSSPMLKAIDSLRKEFICIL 1100 AK+QF+ DYSDHLAL+RAYEGWK+AER ++G DYCWKNFLS +KAIDSLRKEF+ +L Sbjct: 814 AKSQFSC-DYSDHLALVRAYEGWKDAERNFAGYDYCWKNFLSMQSMKAIDSLRKEFLSLL 872 Query: 1099 KDTGVVDDDLHIYNLWNNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSN 920 KD G+VD + N W+++ LIRAVIC GL+PGICSVV+ E S SLKTMEDG+VLLYSN Sbjct: 873 KDAGLVDGSITFCNTWSHEEHLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSN 932 Query: 919 SVNGRESNIPYPWLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDGHLKMLGGY 740 SVN RES IPYPWLVFNEK+KVN+VFLRDSTA+SDS+LLLFGG +S+G+ DGHLKMLGGY Sbjct: 933 SVNARESKIPYPWLVFNEKIKVNAVFLRDSTAVSDSVLLLFGGSISKGETDGHLKMLGGY 992 Query: 739 LEFFMKPTLAETYTNLKRGLEKIIQIKLLNPKMNIEIHRELLSAVRLLITEDQCDGRFVF 560 LEFFMKP +AE Y +L+R L+++I+ KLLNP+M++ + +LLSA+RLL++ED CDGRF+F Sbjct: 993 LEFFMKPIIAEMYQSLRRELDELIKTKLLNPRMDLHAYHDLLSAIRLLVSEDPCDGRFIF 1052 Query: 559 GHQILKXXXXXXXXXXXXXXXXSRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVK 380 G Q+LK + + GDN+K+QLQTL+TRAG+ P YK +K Sbjct: 1053 GCQVLKPSKMSVTPTQGALASRTES----GPGGDNSKSQLQTLITRAGYAAPTYKTKQLK 1108 Query: 379 NNQFQAMVEINGMQFTGQPCNNRKLAEKDAAAQALLSLTGRLQACPVDIERISLLLKQKR 200 N+QF++ VE NGMQ GQPCNN+K AEKDAAA+AL L G + P I +S+LLK+ + Sbjct: 1109 NSQFRSTVEFNGMQIMGQPCNNKKSAEKDAAAEALRWLMGETRTGPEYINHMSMLLKKSK 1168 Query: 199 KHH 191 K H Sbjct: 1169 KDH 1171 >ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis vinifera] Length = 1178 Score = 542 bits (1397), Expect = e-152 Identities = 271/420 (64%), Positives = 333/420 (79%) Frame = -2 Query: 1459 EKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPILTVVAGLSVRDPFLMPTDKKDLAEH 1280 E LT+LGR+LS+LPVEP+LGKMLI G++FNCL+PI+TVVAGLSVRDPFLMP DKKDLAE Sbjct: 757 ENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMTVVAGLSVRDPFLMPFDKKDLAES 816 Query: 1279 AKAQFAAGDYSDHLALIRAYEGWKNAEREYSGPDYCWKNFLSSPMLKAIDSLRKEFICIL 1100 AKA F+ +SDHLAL++AYEGWK AER+ SG +YCW+NFLS+ LKAIDSLR++F +L Sbjct: 817 AKALFSGRTFSDHLALVQAYEGWKEAERQQSGYEYCWRNFLSAQTLKAIDSLRRQFFYLL 876 Query: 1099 KDTGVVDDDLHIYNLWNNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSN 920 KD G+V+++ N W++D LIRAVICAGLFPGICSVVNKE S+SLKTMEDG+VLLYSN Sbjct: 877 KDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSN 936 Query: 919 SVNGRESNIPYPWLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDGHLKMLGGY 740 SVN RE IPYPWLVFNEKVKVNSVFLRDSTA+SDSMLLLFGG++SRG DGHLKMLGGY Sbjct: 937 SVNAREPKIPYPWLVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGY 996 Query: 739 LEFFMKPTLAETYTNLKRGLEKIIQIKLLNPKMNIEIHRELLSAVRLLITEDQCDGRFVF 560 LEFFMKP LA+TY +LK+ LE++IQ KLLNP +++ + ELLSAVRLL++ED+C+GRFVF Sbjct: 997 LEFFMKPDLADTYLSLKKELEELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVF 1056 Query: 559 GHQILKXXXXXXXXXXXXXXXXSRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVK 380 G Q+ K GDNAK +LQT++ R GH+ PVYK +K Sbjct: 1057 GRQLPKSSKQAIKETSAGAL-----LRSGGAGGDNAKGRLQTVLIRGGHQAPVYKTRQLK 1111 Query: 379 NNQFQAMVEINGMQFTGQPCNNRKLAEKDAAAQALLSLTGRLQACPVDIERISLLLKQKR 200 NN F++ V NG+QF GQPC+++KLAEKDAAA+AL L G Q+ DI+ +S+LLK+ + Sbjct: 1112 NNMFRSTVIFNGLQFAGQPCSSKKLAEKDAAAKALEWLMGERQSSTEDIDHMSMLLKKSK 1171