BLASTX nr result
ID: Coptis21_contig00009742
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009742 (805 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31689.3| unnamed protein product [Vitis vinifera] 130 3e-28 ref|XP_002532292.1| RING-H2 finger protein ATL2G precursor, puta... 123 5e-26 ref|XP_002311162.1| predicted protein [Populus trichocarpa] gi|2... 123 5e-26 ref|XP_004142830.1| PREDICTED: RING-H2 finger protein ATL52-like... 111 2e-22 ref|XP_003612592.1| RING finger family protein [Medicago truncat... 110 5e-22 >emb|CBI31689.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 130 bits (327), Expect = 3e-28 Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 5/136 (3%) Frame = -3 Query: 611 MDDGEHKDPTMARIFVLLSGVASAAMVLVIYHCFAVGCDDR----QQGPLVXXXXXXXXX 444 M + +P +++ V+L+GVASAA+V+ +YHC V C +R + Sbjct: 1 MAEDNPNNPILSKFAVILAGVASAAVVVTVYHCVVVSCRNRGRQRSDRERLQQLMYQRAD 60 Query: 443 XXQSRGLDKSMLQLIPSYRYDKEDGLVG-EEGICAVCLSEFEEGQEIRTLPECVHSFHVP 267 S + + L +IP+++Y K L G ++G+CAVCLSEFEEG+E+RTLPEC+HSFHV Sbjct: 61 QTPSSVDNSAALLMIPAHKYHKGMELAGNDDGVCAVCLSEFEEGEELRTLPECMHSFHVA 120 Query: 266 CIDMWLHSHTSCPLCR 219 CIDMWL+SHT+CPLCR Sbjct: 121 CIDMWLYSHTNCPLCR 136 Score = 100 bits (250), Expect = 3e-19 Identities = 40/57 (70%), Positives = 51/57 (89%) Frame = -3 Query: 389 RYDKEDGLVGEEGICAVCLSEFEEGQEIRTLPECVHSFHVPCIDMWLHSHTSCPLCR 219 +Y+K+ LVG++ +C VCLSEFEEG+E+RTLP C+HSFHVPCIDMWL+SH +CPLCR Sbjct: 193 KYEKDMELVGDDRMCVVCLSEFEEGEELRTLPHCMHSFHVPCIDMWLNSHMNCPLCR 249 Score = 96.3 bits (238), Expect = 7e-18 Identities = 42/68 (61%), Positives = 52/68 (76%) Frame = -3 Query: 422 DKSMLQLIPSYRYDKEDGLVGEEGICAVCLSEFEEGQEIRTLPECVHSFHVPCIDMWLHS 243 D S+ LIPS+ Y K+ GLV C VCL EF++G+ IR LP+C+HSFHVPCIDMWL S Sbjct: 285 DDSITNLIPSFHYTKDIGLVN--ATCVVCLCEFKDGEAIRILPKCLHSFHVPCIDMWLCS 342 Query: 242 HTSCPLCR 219 H++CPLCR Sbjct: 343 HSNCPLCR 350 >ref|XP_002532292.1| RING-H2 finger protein ATL2G precursor, putative [Ricinus communis] gi|223527994|gb|EEF30076.1| RING-H2 finger protein ATL2G precursor, putative [Ricinus communis] Length = 180 Score = 123 bits (308), Expect = 5e-26 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 5/129 (3%) Frame = -3 Query: 590 DPTMARIFVLLSGVASAAMVLVIYHCFAVGCDDRQQGP-----LVXXXXXXXXXXXQSRG 426 D ++ LL GV SAA+V+ IYHC A G +R + L Sbjct: 9 DDISNKVTALLIGVGSAALVVTIYHCLATGWCNRDRARANAQRLHQDSNSIIIGRETPSS 68 Query: 425 LDKSMLQLIPSYRYDKEDGLVGEEGICAVCLSEFEEGQEIRTLPECVHSFHVPCIDMWLH 246 ++ S +LIP+++Y K G GEE C +CLSEFEEG+E+R+LPEC+HS+H+PCIDMWL Sbjct: 69 IENSAARLIPAFKYQKGMGSGGEEATCPICLSEFEEGEEVRSLPECMHSYHLPCIDMWLC 128 Query: 245 SHTSCPLCR 219 SH++CP+CR Sbjct: 129 SHSNCPVCR 137 >ref|XP_002311162.1| predicted protein [Populus trichocarpa] gi|222850982|gb|EEE88529.1| predicted protein [Populus trichocarpa] Length = 168 Score = 123 bits (308), Expect = 5e-26 Identities = 57/127 (44%), Positives = 79/127 (62%) Frame = -3 Query: 599 EHKDPTMARIFVLLSGVASAAMVLVIYHCFAVGCDDRQQGPLVXXXXXXXXXXXQSRGLD 420 + D +++ VLL GV +AA+V IYHC + R + L+ Sbjct: 4 DDNDDLNSKVAVLLIGVGAAAIVATIYHCLVMTWCCRYRA---RPNPQEPQLHVNETILE 60 Query: 419 KSMLQLIPSYRYDKEDGLVGEEGICAVCLSEFEEGQEIRTLPECVHSFHVPCIDMWLHSH 240 S Q+IPSY Y K+ GL G+ G CA+CL +FEEG+++R LPEC+HS+HV CIDMWL+SH Sbjct: 61 NSTAQVIPSYEYRKDTGLTGDNGTCAICLGDFEEGEQLRELPECLHSYHVACIDMWLYSH 120 Query: 239 TSCPLCR 219 +SCP+CR Sbjct: 121 SSCPMCR 127 >ref|XP_004142830.1| PREDICTED: RING-H2 finger protein ATL52-like [Cucumis sativus] gi|449524882|ref|XP_004169450.1| PREDICTED: RING-H2 finger protein ATL52-like [Cucumis sativus] Length = 175 Score = 111 bits (277), Expect = 2e-22 Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 12/131 (9%) Frame = -3 Query: 575 RIFVLLSGVASAAMVLVIYHCF-AVGCDDRQ---QGPLVXXXXXXXXXXXQSRGLDKSML 408 ++ + L + SA V+ IYHC A CD R+ R + S++ Sbjct: 14 KLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLPITDTPRSTENSVV 73 Query: 407 QLIPSYRYDKEDGLVGE--------EGICAVCLSEFEEGQEIRTLPECVHSFHVPCIDMW 252 LIP+++Y+K + G +G CA+CLSEFEEG+EI+TLPEC HS+H+PCIDMW Sbjct: 74 HLIPAHKYEKRMAVDGGGGGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHMPCIDMW 133 Query: 251 LHSHTSCPLCR 219 L+SH+SCP+CR Sbjct: 134 LYSHSSCPMCR 144 >ref|XP_003612592.1| RING finger family protein [Medicago truncatula] gi|355513927|gb|AES95550.1| RING finger family protein [Medicago truncatula] Length = 175 Score = 110 bits (274), Expect = 5e-22 Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 6/135 (4%) Frame = -3 Query: 605 DGEHKD-PTMARIFVLLSGVASAAMVLVIYHCFAVG-CDDRQQGPLVXXXXXXXXXXXQS 432 DG+H D P + VLL + SA V+ +YH A+ C+ ++ Sbjct: 2 DGDHGDNPLSDNVIVLLIAMGSALFVVSMYHVVAICFCNHQRTTTNPTQPPRQPATPSLE 61 Query: 431 RGLDKSMLQLIPSYRYDK--EDGLV--GEEGICAVCLSEFEEGQEIRTLPECVHSFHVPC 264 S+ L P+++Y K +D V GE CAVCL +FEEG+E+RT+PEC+HSFHV C Sbjct: 62 ENTSTSVANLFPTHKYHKRNKDDAVPDGEGDTCAVCLGDFEEGEELRTMPECLHSFHVSC 121 Query: 263 IDMWLHSHTSCPLCR 219 IDMWLHSH++CP+CR Sbjct: 122 IDMWLHSHSNCPVCR 136