BLASTX nr result

ID: Coptis21_contig00009718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009718
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520863.1| Alpha-expansin 8 precursor, putative [Ricinu...   417   e-114
gb|AAC33529.1| expansin [Prunus armeniaca]                            415   e-113
gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|g...   414   e-113
gb|AAR09169.1| alpha-expansin 2 [Populus tremula x Populus tremu...   412   e-113
dbj|BAC67190.1| expansin [Pyrus communis]                             410   e-112

>ref|XP_002520863.1| Alpha-expansin 8 precursor, putative [Ricinus communis]
           gi|223539994|gb|EEF41572.1| Alpha-expansin 8 precursor,
           putative [Ricinus communis]
          Length = 252

 Score =  417 bits (1071), Expect = e-114
 Identities = 192/228 (84%), Positives = 204/228 (89%)
 Frame = +2

Query: 137 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTDTAALST 316
           LLF L N+ L G YGDYGGW+ AHATFY              YGNLYSQGYGT+TAALST
Sbjct: 11  LLFFLLNLCLRGTYGDYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 70

Query: 317 ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 496
           ALFN+GLSCGSCY+MRC++DP+WCLPGTITVTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 71  ALFNSGLSCGSCYEMRCDNDPKWCLPGTITVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 130

Query: 497 AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVSI 676
           AEPAFLQIAQYRAGIVPVSFRR+PC KKGGIRFTINGHSYFNLVLITNVAGAGDVH+VSI
Sbjct: 131 AEPAFLQIAQYRAGIVPVSFRRIPCAKKGGIRFTINGHSYFNLVLITNVAGAGDVHSVSI 190

Query: 677 KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAP 820
           KGSKTGWQ MSRNWGQNWQSNSY+NGQSLSFQVTTSDGRT+TSYNVAP
Sbjct: 191 KGSKTGWQTMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTVTSYNVAP 238


>gb|AAC33529.1| expansin [Prunus armeniaca]
          Length = 254

 Score =  415 bits (1066), Expect = e-113
 Identities = 191/228 (83%), Positives = 203/228 (89%)
 Frame = +2

Query: 137 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTDTAALST 316
           L   LFN+ LHGA+ DYGGWEGAHATFY              YGNLYSQGYGT+TAALST
Sbjct: 13  LSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 72

Query: 317 ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 496
           ALFNNGLSCGSCY+MRCN+DPRWC PG+I VTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 73  ALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 132

Query: 497 AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVSI 676
           AEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIRFTINGHSYFNLVLITNV GAGDVH+VSI
Sbjct: 133 AEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSI 192

Query: 677 KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAP 820
           KGS+TGWQ MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+TSYNVAP
Sbjct: 193 KGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYNVAP 240


>gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|gb|AAK48846.1|AF350937_1
           expansin [Prunus cerasus]
          Length = 254

 Score =  414 bits (1063), Expect = e-113
 Identities = 190/228 (83%), Positives = 203/228 (89%)
 Frame = +2

Query: 137 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTDTAALST 316
           L   LFN+ LHGA+ DYGGWEGAHATFY              YGNLYSQGYGT+TAALST
Sbjct: 13  LSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 72

Query: 317 ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 496
           ALFNNGLSCGSCY+MRCN+DPRWC PG+I VTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 73  ALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 132

Query: 497 AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVSI 676
           AEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIRFTINGHSYFNLVLITNV GAGDVH+VSI
Sbjct: 133 AEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSI 192

Query: 677 KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAP 820
           KGS+TGWQ MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+T+YNVAP
Sbjct: 193 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTNYNVAP 240


>gb|AAR09169.1| alpha-expansin 2 [Populus tremula x Populus tremuloides]
          Length = 250

 Score =  412 bits (1059), Expect = e-113
 Identities = 189/229 (82%), Positives = 203/229 (88%)
 Frame = +2

Query: 134 ILLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTDTAALS 313
           +LLF  F+  L G + DYGGW+G HATFY              YGNLYSQGYGT TAALS
Sbjct: 10  LLLFICFH--LQGIFADYGGWQGGHATFYGGGDATGTMGGACGYGNLYSQGYGTSTAALS 67

Query: 314 TALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFD 493
           TALFNNGLSCGSCY+MRC+DDP+WCLPGTITVTATNFCPPNP+QPN+NGGWCNPPLQHFD
Sbjct: 68  TALFNNGLSCGSCYEMRCDDDPKWCLPGTITVTATNFCPPNPSQPNNNGGWCNPPLQHFD 127

Query: 494 LAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVS 673
           +AEPAFLQIAQYRAGIVPV+FRRVPCVKKGGIRFTINGHSYFNLVLITNV GAGDVH+VS
Sbjct: 128 MAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVS 187

Query: 674 IKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAP 820
           IKGSKTGWQAMSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+TSYN  P
Sbjct: 188 IKGSKTGWQAMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTSYNAVP 236


>dbj|BAC67190.1| expansin [Pyrus communis]
          Length = 254

 Score =  410 bits (1053), Expect = e-112
 Identities = 197/243 (81%), Positives = 210/243 (86%), Gaps = 2/243 (0%)
 Frame = +2

Query: 98  MAIH-LSYSNTLPILL-FTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXXYGN 271
           MA H LS++   PI L   LFN+ LHG +  YG WEGAHATFY              YGN
Sbjct: 1   MAAHALSFA---PIALSVVLFNLHLHGVFAVYGSWEGAHATFYGGGDASGTMGGACGYGN 57

Query: 272 LYSQGYGTDTAALSTALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPN 451
           LYSQGYGT+TAALSTALFNNGLSCGSCY+MRC++DPRWC PG+I VTATNFCPPN AQ N
Sbjct: 58  LYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQSN 117

Query: 452 DNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVL 631
           DNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVL
Sbjct: 118 DNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVL 177

Query: 632 ITNVAGAGDVHAVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYN 811
           ITNVAGAGDVH+VSIKGS+TGWQ MSRNWGQNWQSNSYLNGQ+LSFQVTTSDGRT+TSYN
Sbjct: 178 ITNVAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYN 237

Query: 812 VAP 820
           VAP
Sbjct: 238 VAP 240


Top