BLASTX nr result

ID: Coptis21_contig00009714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009714
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone ...   109   3e-22
ref|XP_002333468.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
dbj|BAK02204.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   3e-20
ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone ...   102   4e-20
ref|XP_002524088.1| Co-chaperone protein HscB, mitochondrial pre...   100   2e-19

>ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Cucumis sativus]
           gi|449501132|ref|XP_004161286.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial-like
           [Cucumis sativus]
          Length = 275

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/85 (61%), Positives = 65/85 (76%)
 Frame = -3

Query: 345 VHVDEEKTVSEPELLTEMMEFREAVEEATSPQALKEIEYQVQEKMKTWSKLFDNAFKNRK 166
           V VDEE T+SEPELL E+ME REAVE+A+  Q L +I+ Q+QEK+  WS  F  A ++R 
Sbjct: 191 VDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALRDRN 250

Query: 165 YEDAISSIQRMTYYHRINEEITKKL 91
           + DA+SSIQRMTYY R+ EEITKKL
Sbjct: 251 FNDAVSSIQRMTYYERVKEEITKKL 275


>ref|XP_002333468.1| predicted protein [Populus trichocarpa] gi|222836988|gb|EEE75381.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = -3

Query: 345 VHVDEEKTVSEPELLTEMMEFREAVEEATSPQALKEIEYQVQEKMKTWSKLFDNAFKNRK 166
           V+V+EE+TVSEPELL E+ME REAVEEA   QALKEI+  +QEK++ WS  F +AF+  K
Sbjct: 126 VNVNEEETVSEPELLAEIMEIREAVEEAPDYQALKEIQSSMQEKLQNWSNSFASAFQGHK 185

Query: 165 YEDAISSIQRMTYYHRINEEITKKL 91
           +E+A + I+RMTYY R+NEEI K+L
Sbjct: 186 FEEAKNCIRRMTYYDRVNEEIVKRL 210


>dbj|BAK02204.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 259

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = -3

Query: 345 VHVDEEKTVSEPELLTEMMEFREAVEEATSPQALKEIEYQVQEKMKTWSKLFDNAFKNRK 166
           +HVDEEKT+++PELL EMME REAV EA   Q LK+I+ QV+ K++TWSK F  AF  R 
Sbjct: 175 IHVDEEKTINDPELLMEMMEIREAVSEAGDSQTLKKIQSQVKSKLETWSKSFQEAFDKRD 234

Query: 165 YEDAISSIQRMTYYHRINEEITKKL 91
           ++ A+ + QRM YY R  EE  KKL
Sbjct: 235 FDSAVEATQRMRYYERAMEETVKKL 259


>ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial isoform 1 [Vitis vinifera]
           gi|359481056|ref|XP_003632561.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial isoform
           2 [Vitis vinifera] gi|296089348|emb|CBI39120.3| unnamed
           protein product [Vitis vinifera]
          Length = 267

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/85 (56%), Positives = 66/85 (77%)
 Frame = -3

Query: 345 VHVDEEKTVSEPELLTEMMEFREAVEEATSPQALKEIEYQVQEKMKTWSKLFDNAFKNRK 166
           V  DEE+T+S+   L E+ME REAVEEA + + L +I+ QVQEK+K WS+ F NAF++ K
Sbjct: 183 VDFDEEQTISDISFLAEIMEIREAVEEAVNSETLLQIQSQVQEKLKHWSQSFSNAFQSGK 242

Query: 165 YEDAISSIQRMTYYHRINEEITKKL 91
           +E+A+ S+QRMTYY R+N+EI KKL
Sbjct: 243 FEEAVISVQRMTYYVRVNDEIMKKL 267


>ref|XP_002524088.1| Co-chaperone protein HscB, mitochondrial precursor, putative
           [Ricinus communis] gi|223536656|gb|EEF38298.1|
           Co-chaperone protein HscB, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 272

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = -3

Query: 345 VHVDEEKTVSEPELLTEMMEFREAVEEATSPQALKEIEYQVQEKMKTWSKLFDNAFKNRK 166
           V V+EE+T+SE +LL E+ME REAVEEA   +AL  I+  ++E +  WS  F NAF++RK
Sbjct: 188 VDVNEEETISETQLLAEIMEIREAVEEAPDSKALTGIQSLIKENLLQWSNSFGNAFQSRK 247

Query: 165 YEDAISSIQRMTYYHRINEEITKKL 91
           +EDAI+ I+RMTYY R+NEEI K+L
Sbjct: 248 FEDAIACIRRMTYYDRVNEEIVKRL 272


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