BLASTX nr result

ID: Coptis21_contig00009713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009713
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone ...    70   1e-10
ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone ...    68   7e-10
ref|XP_002333468.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
dbj|BAB08963.1| unnamed protein product [Arabidopsis thaliana]         64   1e-08
ref|XP_002873254.1| hypothetical protein ARALYDRAFT_487450 [Arab...    64   1e-08

>ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial isoform 1 [Vitis vinifera]
           gi|359481056|ref|XP_003632561.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial isoform
           2 [Vitis vinifera] gi|296089348|emb|CBI39120.3| unnamed
           protein product [Vitis vinifera]
          Length = 267

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/54 (57%), Positives = 44/54 (81%)
 Frame = -2

Query: 263 QALKEIEYQVQEKMKTWSKLFDNAFKNKKYEDAISSIQRMTYYHRINEEITKKL 102
           + L +I+ QVQEK+K WS+ F NAF++ K+E+A+ S+QRMTYY R+N+EI KKL
Sbjct: 214 ETLLQIQSQVQEKLKHWSQSFSNAFQSGKFEEAVISVQRMTYYVRVNDEIMKKL 267


>ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Cucumis sativus]
           gi|449501132|ref|XP_004161286.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial-like
           [Cucumis sativus]
          Length = 275

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = -2

Query: 263 QALKEIEYQVQEKMKTWSKLFDNAFKNKKYEDAISSIQRMTYYHRINEEITKKL 102
           Q L +I+ Q+QEK+  WS  F  A +++ + DA+SSIQRMTYY R+ EEITKKL
Sbjct: 222 QELNQIQSQMQEKLNHWSNTFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 275


>ref|XP_002333468.1| predicted protein [Populus trichocarpa] gi|222836988|gb|EEE75381.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = -2

Query: 263 QALKEIEYQVQEKMKTWSKLFDNAFKNKKYEDAISSIQRMTYYHRINEEITKKL 102
           QALKEI+  +QEK++ WS  F +AF+  K+E+A + I+RMTYY R+NEEI K+L
Sbjct: 157 QALKEIQSSMQEKLQNWSNSFASAFQGHKFEEAKNCIRRMTYYDRVNEEIVKRL 210


>dbj|BAB08963.1| unnamed protein product [Arabidopsis thaliana]
          Length = 246

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 260 ALKEIEYQVQEKMKTWSKLFDNAFKNKKYEDAISSIQRMTYYHRINEEITKKL 102
           +L +I  QVQEK+K WS  F  AF+++K++DA+  IQRMTYY R  EEI KKL
Sbjct: 194 SLNQIRSQVQEKLKQWSDSFVEAFESQKFDDAVKCIQRMTYYERACEEILKKL 246


>ref|XP_002873254.1| hypothetical protein ARALYDRAFT_487450 [Arabidopsis lyrata subsp.
           lyrata] gi|297319091|gb|EFH49513.1| hypothetical protein
           ARALYDRAFT_487450 [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 260 ALKEIEYQVQEKMKTWSKLFDNAFKNKKYEDAISSIQRMTYYHRINEEITKKL 102
           AL +I  QVQEK+K WS  F  AF++++++DA+  IQRMTYY R  EEI KKL
Sbjct: 203 ALNQIRSQVQEKLKHWSDSFVEAFESQRFDDAVKCIQRMTYYERACEEIVKKL 255


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