BLASTX nr result

ID: Coptis21_contig00009708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009708
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616602.1| hypothetical protein MTR_5g082250 [Medicago ...    71   6e-10
ref|XP_003637202.1| hypothetical protein MTR_077s0013 [Medicago ...    64   5e-08

>ref|XP_003616602.1| hypothetical protein MTR_5g082250 [Medicago truncatula]
           gi|355517937|gb|AES99560.1| hypothetical protein
           MTR_5g082250 [Medicago truncatula]
          Length = 225

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 18/236 (7%)
 Frame = +1

Query: 181 MAPRAR-PRK--AGNMRIDAAIAKVSCLGYETPLIRRTVNKLLKVYDGE--WVFIEDDNY 345
           MAPR R PR+   GN R+DAA+  +  LG+E  +IR TV +LL VY+G   W FIE+ +Y
Sbjct: 1   MAPRRRQPRRQTVGNTRMDAALDAMRQLGFEEKIIRDTVEELLDVYEGNQGWPFIEEGSY 60

Query: 346 KXXXXXXXXXXXXXXXXXXCNEEDKDSSSDGAGPSNTCDDAGTSDAYDVRDAACLPH--- 516
           K                  C+E   D+  DG G +++     T    +V  +  +P    
Sbjct: 61  K---------LLIETILCNCDENKDDARQDGVGETSSAATPATG-ITEVGSSYLVPQDYV 110

Query: 517 AEGWKDISCMDPDRPQCREI--VTAYEENDGEEN-----KGRGLEANALKGAVGFLLPCR 675
             G  D+           +   +   EE+ G +N            + ++     L   R
Sbjct: 111 TRGNDDLDSASQTNDHDHDFAPIGNVEEDAGVKNTTVRESNHETFVSNVEATTDKLPQSR 170

Query: 676 RKPCYGFIGSDSIDEEPDLVFFETEASRR---KEMRRKVNYLRDSKRSRWDMQERP 834
            +PCYG+I SD  D++ DL++F+     +   + +   + +    ++SRWD  E+P
Sbjct: 171 YRPCYGWISSD--DDDVDLIYFQPPPLPKHIEELIGTSLAHEGPKRKSRWD--EKP 222


>ref|XP_003637202.1| hypothetical protein MTR_077s0013 [Medicago truncatula]
           gi|355503137|gb|AES84340.1| hypothetical protein
           MTR_077s0013 [Medicago truncatula]
          Length = 586

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = +1

Query: 181 MAPRARPRKAGNMRIDAAIAKVSCLGYETPLIRRTVNKLLKVYDGE--WVFIEDDNY 345
           MAPR RP K G+ R+DAA+  ++ LG++  LI +TVNKLLK+YDG   W FIED  Y
Sbjct: 1   MAPRRRPLKKGDSRMDAALDAMTPLGFDKKLIHQTVNKLLKIYDGNEGWHFIEDGAY 57


Top