BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009700
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   287   1e-75
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...   267   1e-69
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...   265   4e-69
ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...   265   7e-69
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   263   1e-68

>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  287 bits (734), Expect = 1e-75
 Identities = 143/211 (67%), Positives = 162/211 (76%), Gaps = 3/211 (1%)
 Frame = +1

Query: 1   ENVDYGTMVYVGGIPYYSAEDDIRSFFESCGTITEIDCMRFPETGKFRGIAIITFKTEXX 180
           EN D    VYVGGIPYYS EDDIRS+F+SCGTITE+DCM FPE+GKFRGIAII+FKTE  
Sbjct: 176 ENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFKTEAA 235

Query: 181 XXXXXXXXXXEMGELFLKIQPYKATRVQKSSDFAPQIVEGYNRAYVGNLSWDITEDELRK 360
                     +MG LFLKIQPYK TR  KSSDFAP++VEGYNR YVGNL WDITEDE+RK
Sbjct: 236 AKRALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMVEGYNRIYVGNLPWDITEDEVRK 295

Query: 361 LFSDCKISTIRFGMDKTTGEFRGYAHVDFKDNLSLTIALKLDQTVVCERPVRIRCAVPKK 540
            FS C +S+IRFGMDK T EFRGYAHVDF DN SLT+ALKLDQ +VC RP +IRCAVPKK
Sbjct: 296 FFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKIRCAVPKK 355

Query: 541 ETGKKDV---AISTDQMAENGSLTSGGGKKR 624
             G KD    A S+++   +G LTSG GK +
Sbjct: 356 --GAKDYSTPAPSSEKAENDGGLTSGSGKMK 384


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score =  267 bits (683), Expect = 1e-69
 Identities = 136/203 (66%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
 Frame = +1

Query: 19  TMVYVGGIPYYSAEDDIRSFFESCGTITEIDCMRFPETGKFRGIAIITFKTEXXXXXXXX 198
           T  YVGGIPYYS EDDIRS+FESCGTITE+DCM FPETGKFRGIAIITFKTE        
Sbjct: 166 TKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALA 225

Query: 199 XXXXEMGELFLKIQPYKATRVQKSSDFAPQIVEGYNRAYVGNLSWDITEDELRKLFSDCK 378
               +MG LFLKIQPYKATR  K+SDFAP+I+EGYNR YVGNLSWDITE+ELRK F+ C+
Sbjct: 226 LDGADMGGLFLKIQPYKATRANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFNGCE 285

Query: 379 ISTIRFGMDKTTGEFRGYAHVDFKDNLSLTIALKLDQTVVCERPVRIRCAVP-KKETGKK 555
           I+++RFGMDK TGEFRGYAHVDF D+ SL  AL LDQ V+  RPVRI CAVP KK+TG  
Sbjct: 286 ITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRPVRISCAVPLKKKTG-- 343

Query: 556 DVAISTDQMAENGSLTSGGGKKR 624
               S+     NG   S  G  R
Sbjct: 344 -THTSSTVNGANGDKPSSTGSDR 365


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  265 bits (678), Expect = 4e-69
 Identities = 126/177 (71%), Positives = 140/177 (79%)
 Frame = +1

Query: 10  DYGTMVYVGGIPYYSAEDDIRSFFESCGTITEIDCMRFPETGKFRGIAIITFKTEXXXXX 189
           D    VYVGGIPYYS EDDIRSFFE CGTITE+DCM FP++GKFRGIAII+FKTE     
Sbjct: 192 DIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKR 251

Query: 190 XXXXXXXEMGELFLKIQPYKATRVQKSSDFAPQIVEGYNRAYVGNLSWDITEDELRKLFS 369
                  +MG  +LKIQPYK T+V K  +FAP IVEGYNR YVGNLSWDITED+L+K FS
Sbjct: 252 ALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGIVEGYNRIYVGNLSWDITEDDLKKFFS 311

Query: 370 DCKISTIRFGMDKTTGEFRGYAHVDFKDNLSLTIALKLDQTVVCERPVRIRCAVPKK 540
           DCKIS+IRFGMDK TGEFRGY HVDF DN SL  ALKLDQ +VC RP++I CAVPKK
Sbjct: 312 DCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKISCAVPKK 368


>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score =  265 bits (676), Expect = 7e-69
 Identities = 136/202 (67%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
 Frame = +1

Query: 19  TMVYVGGIPYYSAEDDIRSFFESCGTITEIDCMRFPETGKFRGIAIITFKTEXXXXXXXX 198
           T +YVGGIPYYS EDDIRS+FESCGTITE+DCM FPETGKFRGIAIITFKTE        
Sbjct: 149 TKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALA 208

Query: 199 XXXXEMGELFLKIQPYKATRVQKSSDFAPQIVEGYNRAYVGNLSWDITEDELRKLFSDCK 378
               +MG LFLKIQPYKATR  K+SDFAP+I+EGYNR YVGNLSWDITE+ELRK F++ +
Sbjct: 209 LDGADMGGLFLKIQPYKATRANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFNNSE 268

Query: 379 ISTIRFGMDKTTGEFRGYAHVDFKDNLSLTIALKLDQTVVCERPVRIRCAVP-KKETGKK 555
           I+++RFGMDK TGEFRGYAHVDF D+ SL  AL LDQ V+  RPVRI CAVP KK+TG  
Sbjct: 269 ITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQNVLFGRPVRISCAVPLKKKTGTH 328

Query: 556 DVAISTDQMAENGSLTSGGGKK 621
             A ST   A     +S G  K
Sbjct: 329 --ASSTVNEANGDKSSSTGSDK 348


>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score =  263 bits (673), Expect = 1e-68
 Identities = 123/176 (69%), Positives = 145/176 (82%)
 Frame = +1

Query: 19  TMVYVGGIPYYSAEDDIRSFFESCGTITEIDCMRFPETGKFRGIAIITFKTEXXXXXXXX 198
           T VYVGGIPYYS EDDI SFFESCGTITEIDCM+FPE+GKFRGIAI++FKTE        
Sbjct: 188 TKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALA 247

Query: 199 XXXXEMGELFLKIQPYKATRVQKSSDFAPQIVEGYNRAYVGNLSWDITEDELRKLFSDCK 378
               +MG LFLK+QPYK TR  +++DF+P +VEGYNR Y+GNLSWD+TED+L+KLF +CK
Sbjct: 248 CDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCK 307

Query: 379 ISTIRFGMDKTTGEFRGYAHVDFKDNLSLTIALKLDQTVVCERPVRIRCAVPKKET 546
           I++IRFGMDK TGEFRGYAHVDF D +SL  ALKLDQ ++  RPV+IRCAVPKK T
Sbjct: 308 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGT 363