BLASTX nr result
ID: Coptis21_contig00009698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009698 (1115 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot... 67 8e-09 emb|CBI38030.3| unnamed protein product [Vitis vinifera] 66 1e-08 emb|CBI15777.3| unnamed protein product [Vitis vinifera] 61 6e-07 ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot... 60 1e-06 emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] 60 1e-06 >ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 944 Score = 67.0 bits (162), Expect = 8e-09 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 11/185 (5%) Frame = -2 Query: 766 EISSTTEIHPTRHKRMKLYSVRVDGLHTESISKRDKGLSDFIDLESAPGFEGSISFKPND 587 ++ + E + T+ KR++ + + +H+E KR K S+ +D Sbjct: 19 DLEAAGEYNSTKDKRIRTFD---ENMHSEPKQKRQKAGSNVVD----------------- 58 Query: 586 LQPFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQS---LSNCLVPQSAD 416 +SD F+IPNL E LD G +GS+TK+IE LCARR ++L + L S D Sbjct: 59 -------YSDPFAIPNLLEGLDAGKFGSMTKEIEALCARRMQMLHPYYVMYPSLSYMSTD 111 Query: 415 -GQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSS-------VVILDSDEE 260 G+ A VN + + L E V + + + Y PT+++ VVI+DSD+E Sbjct: 112 LGKQPSKKASKLVNRH-ASHLGHEDVIDLEDDHI-VYDVPTATAVADAALPVVIIDSDDE 169 Query: 259 ESIEQ 245 ES +Q Sbjct: 170 ESGDQ 174 >emb|CBI38030.3| unnamed protein product [Vitis vinifera] Length = 856 Score = 66.2 bits (160), Expect = 1e-08 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 17/186 (9%) Frame = -2 Query: 751 TEIHPTRHKRMKLYSVRVDGLHTESISKRDKGLSDFIDLESAPGFEGSISFKPNDLQPFA 572 TE + T+HKR+ + + +H+E KR K + +D Sbjct: 26 TEFNSTKHKRIWTFE---ENMHSEPKQKRQKAGPNVVD---------------------- 60 Query: 571 AAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL------- 434 +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ SLS Sbjct: 61 --YSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLGKKQ 118 Query: 433 ---VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILDSDE 263 + + + SH+A +D ++ V+D + + + VVI+DSD+ Sbjct: 119 GKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIIDSDD 170 Query: 262 EESIEQ 245 E+ +Q Sbjct: 171 EDCGDQ 176 >emb|CBI15777.3| unnamed protein product [Vitis vinifera] Length = 622 Score = 60.8 bits (146), Expect = 6e-07 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 11/160 (6%) Frame = -2 Query: 691 LHTESISKRDKGLSDFIDLESAPGFEGSISFKPNDLQPFAAAHSDAFSIPNLKEQLDRGV 512 +H+E KR K S+ +D +SD F+IPNL E LD G Sbjct: 1 MHSEPKQKRQKAGSNVVD------------------------YSDPFAIPNLLEGLDAGK 36 Query: 511 YGSVTKDIEDLCARRKKLLQS---LSNCLVPQSAD-GQTSHMAAKDCVNTYPPAVLDSES 344 +GS+TK+IE LCARR ++L + L S D G+ A VN + + L E Sbjct: 37 FGSMTKEIEALCARRMQMLHPYYVMYPSLSYMSTDLGKQPSKKASKLVNRH-ASHLGHED 95 Query: 343 VCNSSAERVNGYQNPTSSS-------VVILDSDEEESIEQ 245 V + + + Y PT+++ VVI+DSD+EES +Q Sbjct: 96 VIDLEDDHI-VYDVPTATAVADAALPVVIIDSDDEESGDQ 134 >ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 903 Score = 59.7 bits (143), Expect = 1e-06 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 17/129 (13%) Frame = -2 Query: 580 PFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL---- 434 P +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ SLS Sbjct: 14 PNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLG 73 Query: 433 ------VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILD 272 + + + SH+A +D ++ V+D + + + VVI+D Sbjct: 74 KKQGKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIID 125 Query: 271 SDEEESIEQ 245 SD+E+ +Q Sbjct: 126 SDDEDCGDQ 134 >emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] Length = 1187 Score = 59.7 bits (143), Expect = 1e-06 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 17/129 (13%) Frame = -2 Query: 580 PFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL---- 434 P +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ SLS Sbjct: 14 PNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLG 73 Query: 433 ------VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILD 272 + + + SH+A +D ++ V+D + + + VVI+D Sbjct: 74 KKQGKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIID 125 Query: 271 SDEEESIEQ 245 SD+E+ +Q Sbjct: 126 SDDEDCGDQ 134