BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009698
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...    67   8e-09
emb|CBI38030.3| unnamed protein product [Vitis vinifera]               66   1e-08
emb|CBI15777.3| unnamed protein product [Vitis vinifera]               61   6e-07
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...    60   1e-06
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]    60   1e-06

>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 944

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
 Frame = -2

Query: 766 EISSTTEIHPTRHKRMKLYSVRVDGLHTESISKRDKGLSDFIDLESAPGFEGSISFKPND 587
           ++ +  E + T+ KR++ +    + +H+E   KR K  S+ +D                 
Sbjct: 19  DLEAAGEYNSTKDKRIRTFD---ENMHSEPKQKRQKAGSNVVD----------------- 58

Query: 586 LQPFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQS---LSNCLVPQSAD 416
                  +SD F+IPNL E LD G +GS+TK+IE LCARR ++L     +   L   S D
Sbjct: 59  -------YSDPFAIPNLLEGLDAGKFGSMTKEIEALCARRMQMLHPYYVMYPSLSYMSTD 111

Query: 415 -GQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSS-------VVILDSDEE 260
            G+     A   VN +  + L  E V +   + +  Y  PT+++       VVI+DSD+E
Sbjct: 112 LGKQPSKKASKLVNRH-ASHLGHEDVIDLEDDHI-VYDVPTATAVADAALPVVIIDSDDE 169

Query: 259 ESIEQ 245
           ES +Q
Sbjct: 170 ESGDQ 174


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
 Frame = -2

Query: 751 TEIHPTRHKRMKLYSVRVDGLHTESISKRDKGLSDFIDLESAPGFEGSISFKPNDLQPFA 572
           TE + T+HKR+  +    + +H+E   KR K   + +D                      
Sbjct: 26  TEFNSTKHKRIWTFE---ENMHSEPKQKRQKAGPNVVD---------------------- 60

Query: 571 AAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL------- 434
             +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ       SLS          
Sbjct: 61  --YSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLGKKQ 118

Query: 433 ---VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILDSDE 263
                +  + + SH+A +D ++     V+D      +  +         +  VVI+DSD+
Sbjct: 119 GKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIIDSDD 170

Query: 262 EESIEQ 245
           E+  +Q
Sbjct: 171 EDCGDQ 176


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
 Frame = -2

Query: 691 LHTESISKRDKGLSDFIDLESAPGFEGSISFKPNDLQPFAAAHSDAFSIPNLKEQLDRGV 512
           +H+E   KR K  S+ +D                        +SD F+IPNL E LD G 
Sbjct: 1   MHSEPKQKRQKAGSNVVD------------------------YSDPFAIPNLLEGLDAGK 36

Query: 511 YGSVTKDIEDLCARRKKLLQS---LSNCLVPQSAD-GQTSHMAAKDCVNTYPPAVLDSES 344
           +GS+TK+IE LCARR ++L     +   L   S D G+     A   VN +  + L  E 
Sbjct: 37  FGSMTKEIEALCARRMQMLHPYYVMYPSLSYMSTDLGKQPSKKASKLVNRH-ASHLGHED 95

Query: 343 VCNSSAERVNGYQNPTSSS-------VVILDSDEEESIEQ 245
           V +   + +  Y  PT+++       VVI+DSD+EES +Q
Sbjct: 96  VIDLEDDHI-VYDVPTATAVADAALPVVIIDSDDEESGDQ 134


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 903

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
 Frame = -2

Query: 580 PFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL---- 434
           P    +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ       SLS       
Sbjct: 14  PNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLG 73

Query: 433 ------VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILD 272
                   +  + + SH+A +D ++     V+D      +  +         +  VVI+D
Sbjct: 74  KKQGKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIID 125

Query: 271 SDEEESIEQ 245
           SD+E+  +Q
Sbjct: 126 SDDEDCGDQ 134


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
 Frame = -2

Query: 580 PFAAAHSDAFSIPNLKEQLDRGVYGSVTKDIEDLCARRKKLLQ-------SLSNCL---- 434
           P    +SD F+IPNL E LD G +GSVTK+IE LCARR ++LQ       SLS       
Sbjct: 14  PNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYPSLSYMCTDLG 73

Query: 433 ------VPQSADGQTSHMAAKDCVNTYPPAVLDSESVCNSSAERVNGYQNPTSSSVVILD 272
                   +  + + SH+A +D ++     V+D      +  +         +  VVI+D
Sbjct: 74  KKQGKKASKLVNREASHLAHEDVIDLEDDHVVDDALTATAVED--------ATLPVVIID 125

Query: 271 SDEEESIEQ 245
           SD+E+  +Q
Sbjct: 126 SDDEDCGDQ 134