BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009693
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   6e-12
ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837...    70   1e-10
ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [S...    69   4e-10
gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]         68   9e-10
ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group] g...    66   3e-09

>dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 740

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/124 (34%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
 Frame = -3

Query: 350 ENISISTDQTAENGSLSCGGGKKRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 174
           + + + + +  +N   +    KKRRTCYEC                              
Sbjct: 489 KKVEVISSENKDNTDSAEALSKKRRTCYECGVPGHISSACPNKKASEVIADENKANIDSA 548

Query: 173 -------RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYEC 15
                  RTCYECGVPGHLSS CP K A +    +  D+   N        KKRRTCYEC
Sbjct: 549 TTSSKKRRTCYECGVPGHLSSACPNKSAPE----VIVDENKANTESATTASKKRRTCYEC 604

Query: 14  GVPG 3
           GVPG
Sbjct: 605 GVPG 608



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/57 (52%), Positives = 34/57 (59%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYECGVPG 3
           RTCYECG PGHLS  CP K      V + + +  +N        KKRRTCYECGVPG
Sbjct: 471 RTCYECGTPGHLSFACPNK-----KVEVISSENKDNTDSAEALSKKRRTCYECGVPG 522



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/138 (31%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
 Frame = -3

Query: 353 KENISISTDQTAENGSLSCGGGKKRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           K+   +  D+   N   +    KKRRTCYEC                             
Sbjct: 531 KKASEVIADENKANIDSATTSSKKRRTCYECGVPGHLSSACPNKSAPEVIVDENKANTES 590

Query: 173 --------RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGK------- 39
                   RTCYECGVPGHLSS CP K A  E VS  T    E         +       
Sbjct: 591 ATTASKKRRTCYECGVPGHLSSACPNKSA-PEVVSNHTQPFDEPKYAPYMASEQNKIGDG 649

Query: 38  ------KRRTCYECGVPG 3
                 KRR CYECG+ G
Sbjct: 650 STLAPSKRRKCYECGISG 667


>ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
           distachyon]
          Length = 620

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 36/57 (63%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYECGVPG 3
           RTCYECGVPGHLSS CP + A      + TD+   N        KKRRTCYECG+PG
Sbjct: 432 RTCYECGVPGHLSSACPNRKAS----VVVTDEKKANIDSTTSASKKRRTCYECGIPG 484



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYECGVPG 3
           RTC+ECG PGHLS  CP K   K +  +ST+  A          KKRRTCYECGVPG
Sbjct: 389 RTCFECGTPGHLSFACPNK---KPSEDMSTETMAAT-DSAEAPSKKRRTCYECGVPG 441



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 21/138 (15%)
 Frame = -3

Query: 353 KENISISTDQTAENGSLSCGGGKKRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           K +  +ST+  A   S      KKRRTCYEC                             
Sbjct: 408 KPSEDMSTETMAATDSAEAPS-KKRRTCYECGVPGHLSSACPNRKASVVVTDEKKANIDS 466

Query: 173 --------RTCYECGVPGHLSSDCPKKHAG-------------KENVSISTDQTAENXXX 57
                   RTCYECG+PGHLSS CP K A              K   S++ +Q ++    
Sbjct: 467 TTSASKKRRTCYECGIPGHLSSACPNKKAAEVVSNNMQPVDEPKSAPSMAFEQ-SKAADG 525

Query: 56  XXXXGKKRRTCYECGVPG 3
                 KRR CYECG+ G
Sbjct: 526 SNSAPSKRRKCYECGISG 543


>ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
           gi|241945761|gb|EES18906.1| hypothetical protein
           SORBIDRAFT_09g001570 [Sorghum bicolor]
          Length = 669

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 20/137 (14%)
 Frame = -3

Query: 353 KENISISTDQTAENGSLSCGGGKKRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           K++  + +D+   N + +    KKRRTCYEC                             
Sbjct: 457 KKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFISDEKKTNVDS 516

Query: 173 --------RTCYECGVPGHLSSDCPKKHA------------GKENVSISTDQTAENXXXX 54
                   RTCYECG PGHLSS CP K +             K   +I +++T       
Sbjct: 517 ATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEETKVGDESN 576

Query: 53  XXXGKKRRTCYECGVPG 3
               KKRR CYECG+ G
Sbjct: 577 SAASKKRRKCYECGISG 593



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYECGVPG 3
           R CYECG PGHLSS CP     K++  + +D+   N        KKRRTCYECG+PG
Sbjct: 439 RKCYECGTPGHLSSACP----NKKDSDVISDEKDANANSAIAASKKRRTCYECGIPG 491



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKE---------------NVSISTDQTAENXXXXXXXGK 39
           R CYECG+ GHLSS CP K A +                +V     +  E+        K
Sbjct: 584 RKCYECGISGHLSSACPNKKAAEPVYNEEKPDNQSNTVLSVVADEKKANEDTKSAPAKKK 643

Query: 38  KRRTCYECGVPG 3
           KRRTCYECG+ G
Sbjct: 644 KRRTCYECGIAG 655


>gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
          Length = 647

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/130 (30%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
 Frame = -3

Query: 332 TDQTAENGSLSCGGGKKRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------- 174
           +D+  +N + +    KKRRTCYEC                                    
Sbjct: 442 SDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKDPEFISDEKNTNVDSAPASSKK 501

Query: 173 -RTCYECGVPGHLSSDCPKKHA------------GKENVSISTDQTAENXXXXXXXGKKR 33
            RTCYECG PGHLSS CP K               K   +I  ++T           KKR
Sbjct: 502 RRTCYECGTPGHLSSACPNKRTSESVLNNREPADAKPATTIKPEETKAGDESNSVASKKR 561

Query: 32  RTCYECGVPG 3
           R CYECG+ G
Sbjct: 562 RKCYECGISG 571



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/110 (34%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
 Frame = -3

Query: 284 KRRTCYECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTCYECGVPGHLSSDCPKKH--- 114
           K RTCYEC                             R CYECG PGHLSS CP K    
Sbjct: 371 KTRTCYECGTPGHFSSSCPNKKDSEA-----------RKCYECGTPGHLSSACPNKKDSE 419

Query: 113 ---------AGKENVSI----STDQTAENXXXXXXXGKKRRTCYECGVPG 3
                    AG  + +      +D+  +N        KKRRTCYECG+PG
Sbjct: 420 VRKCYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPG 469


>ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
           gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|52353509|gb|AAU44075.1|
           putative RNA recognition motif (RRM)-containing protein
           [Oryza sativa Japonica Group]
           gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa
           Japonica Group] gi|222629967|gb|EEE62099.1| hypothetical
           protein OsJ_16883 [Oryza sativa Japonica Group]
          Length = 548

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/57 (50%), Positives = 34/57 (59%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAGKENVSISTDQTAENXXXXXXXGKKRRTCYECGVPG 3
           R CYECG PGH+SS CP K A +      +D+   N        KKRRTCYECG+PG
Sbjct: 364 RICYECGTPGHISSSCPNKKASE----AISDEKKANVDSVTASSKKRRTCYECGIPG 416



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCPKKHAG-------------KENVSISTDQTAENXXXXXXXGKKR 33
           RTCYECG+PGHLSS CP K AG             K   SI+ +             KKR
Sbjct: 407 RTCYECGIPGHLSSACPNKKAGDAVSSDKGPDDETKSAPSITPEDNKIGEESNSAPSKKR 466

Query: 32  RTCYECGVPG 3
           R CYECG+PG
Sbjct: 467 RKCYECGIPG 476



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 14/71 (19%)
 Frame = -3

Query: 173 RTCYECGVPGHLSSDCP-----------KKHAGKENVSIST---DQTAENXXXXXXXGKK 36
           R CYECG+PGHLSS CP           K + G   +  +T   ++ +++        KK
Sbjct: 467 RKCYECGIPGHLSSACPNKVAAVNSDMEKSYGGSSTIPSATSDGNKASDDTNPVPAKKKK 526

Query: 35  RRTCYECGVPG 3
           RRTCYECG+ G
Sbjct: 527 RRTCYECGIAG 537