BLASTX nr result

ID: Coptis21_contig00009688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009688
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517022.1| protein transport protein sec23, putative [R...   257   2e-66
ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|2...   253   4e-65
ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|2...   251   8e-65
ref|XP_004164421.1| PREDICTED: LOW QUALITY PROTEIN: protein tran...   244   2e-62
ref|XP_004150433.1| PREDICTED: protein transport protein SEC23-l...   244   2e-62

>ref|XP_002517022.1| protein transport protein sec23, putative [Ricinus communis]
           gi|223543657|gb|EEF45185.1| protein transport protein
           sec23, putative [Ricinus communis]
          Length = 782

 Score =  257 bits (656), Expect = 2e-66
 Identities = 127/230 (55%), Positives = 150/230 (65%), Gaps = 12/230 (5%)
 Frame = -2

Query: 655 MDFTELEAIEGLRWSWNSWPCSKSEAQGLVVPLSIMCTPLMQLTDLPLLNYDPLFCNRCN 476
           MDF ELE+IEGLRWSWNSWP  K+EA  L +PLSIMCTPLMQ ++LP+L Y+PL C RC 
Sbjct: 1   MDFVELESIEGLRWSWNSWPTRKNEASSLTIPLSIMCTPLMQSSELPILPYEPLTCTRCF 60

Query: 475 SVLNPYARVEYRLRIWVCPFCYQKNSFPRSYVGIGENNLPAELFPNYSTIEYS------- 317
           ++LNPYARV+Y+ RIWVCPFCYQKN+FP SY GIGE NLPAELFP YST+EY        
Sbjct: 61  AILNPYARVDYQSRIWVCPFCYQKNTFPISYSGIGETNLPAELFPTYSTVEYKFDRIETK 120

Query: 316 -----KVXXXXXXXXXXXXXXXXXXXXXXXLDYWKGNVGPGFVFVVDTCTPEDXXXXXXX 152
                 +                            G +GPGFV VVD CT ++       
Sbjct: 121 FGSSLGLRSSSVNGLYSSSSSLSSMVGTTTPRIAGGEMGPGFVVVVDACTDKEELRAVKN 180

Query: 151 XXXXXLAQLPENALVGLVTFDSMVSVHDVGFMDCEKVVLFHGEREYSSTQ 2
                + QLPENALVGLV FDSMV V+D+GF+DC +VV+FHGERE SS Q
Sbjct: 181 ELLLIIEQLPENALVGLVVFDSMVRVYDLGFLDCSRVVVFHGEREVSSEQ 230


>ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|222864775|gb|EEF01906.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  253 bits (645), Expect = 4e-65
 Identities = 124/220 (56%), Positives = 149/220 (67%), Gaps = 2/220 (0%)
 Frame = -2

Query: 655 MDFTELEAIEGLRWSWNSWPCSKSEAQGLVVPLSIMCTPLMQLTDLPLLNYDPLFCNRCN 476
           MDF ELEAIEGLRWSWN+WP +K++   L++PLSIMCTPLMQ T+LP+L YDPL C RC 
Sbjct: 1   MDFIELEAIEGLRWSWNAWPTTKNQVSTLIIPLSIMCTPLMQSTELPILPYDPLICTRCA 60

Query: 475 SVLNPYARVEYRLRIWVCPFCYQKNSFPRSYVGIGENNLPAELFPNYSTIEYSKVXXXXX 296
           +VLNPYARV+Y+ RIWVCPFCY +N FP SY+GIGE NLPAELFP YST+EY        
Sbjct: 61  AVLNPYARVDYQSRIWVCPFCYNRNHFPISYLGIGETNLPAELFPTYSTVEYK------- 113

Query: 295 XXXXXXXXXXXXXXXXXXLDYWKGNVG--PGFVFVVDTCTPEDXXXXXXXXXXXXLAQLP 122
                                ++G VG  P FVFVVD C  E+            + QLP
Sbjct: 114 --------------IDKVDPKFRGLVGPVPAFVFVVDACMVEEELRAVKNELLLVVEQLP 159

Query: 121 ENALVGLVTFDSMVSVHDVGFMDCEKVVLFHGEREYSSTQ 2
           ENALVGL+TFD+MV V+D+GF +C +VV+FHG RE SS Q
Sbjct: 160 ENALVGLLTFDAMVRVYDLGFSECSRVVVFHGGREVSSEQ 199


>ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|222851479|gb|EEE89026.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  251 bits (642), Expect = 8e-65
 Identities = 123/220 (55%), Positives = 147/220 (66%), Gaps = 2/220 (0%)
 Frame = -2

Query: 655 MDFTELEAIEGLRWSWNSWPCSKSEAQGLVVPLSIMCTPLMQLTDLPLLNYDPLFCNRCN 476
           MDF ELEAIEGLRWSWN+WP +K++   LV+PLSIMCTPLMQ T+LP+L YDPL C RC 
Sbjct: 1   MDFVELEAIEGLRWSWNAWPTTKNQVSSLVIPLSIMCTPLMQSTELPILTYDPLICTRCA 60

Query: 475 SVLNPYARVEYRLRIWVCPFCYQKNSFPRSYVGIGENNLPAELFPNYSTIEYSKVXXXXX 296
           +VLNPYARV+Y+ RIWVCPFCY +N FP SY GIGE NLPAELFP Y+T+EY        
Sbjct: 61  AVLNPYARVDYQSRIWVCPFCYNRNPFPISYSGIGETNLPAELFPTYNTVEYK------- 113

Query: 295 XXXXXXXXXXXXXXXXXXLDYWKGNVG--PGFVFVVDTCTPEDXXXXXXXXXXXXLAQLP 122
                                ++G  G  P FVF+VD C  E+            + QLP
Sbjct: 114 --------------IDKVDSKFRGFAGPVPVFVFLVDACMVEEELRAVKNELLLVVEQLP 159

Query: 121 ENALVGLVTFDSMVSVHDVGFMDCEKVVLFHGEREYSSTQ 2
           ENALVGL+TFD+MV V+D+GF DC +VV+FHG RE SS Q
Sbjct: 160 ENALVGLITFDAMVRVYDLGFSDCSRVVVFHGGREVSSEQ 199


>ref|XP_004164421.1| PREDICTED: LOW QUALITY PROTEIN: protein transport protein
           SEC23-like [Cucumis sativus]
          Length = 783

 Score =  244 bits (622), Expect = 2e-62
 Identities = 125/232 (53%), Positives = 144/232 (62%), Gaps = 14/232 (6%)
 Frame = -2

Query: 655 MDFTELEAIEGLRWSWNSWPCSKSEAQGLVVPLSIMCTPLMQLTDLPLLNYDPLFCNRCN 476
           MDF ELEAIEGLRWSWNSWP SK E+  LV+PLS+MCTPLMQ  +LP L+Y+PL C +C 
Sbjct: 1   MDFVELEAIEGLRWSWNSWPVSKPESLALVIPLSVMCTPLMQSVELPTLSYEPLLCLKCG 60

Query: 475 SVLNPYARVEYRLRIWVCPFCYQKNSFPRSYVGIGENNLPAELFPNYSTIEY-------- 320
           +VLNPYARV+Y  RIW C FCYQKNSFPRSY GIGE NLPAELFP YST+EY        
Sbjct: 61  AVLNPYARVDYTSRIWFCSFCYQKNSFPRSYAGIGETNLPAELFPTYSTVEYAPGRKMES 120

Query: 319 ------SKVXXXXXXXXXXXXXXXXXXXXXXXLDYWKGNVGPGFVFVVDTCTPEDXXXXX 158
                 S V                               GP FVFVVD+C+ E      
Sbjct: 121 PVANSGSNVNMSPSYARNHSSSSLSVSASSSLPAGDSRGNGPAFVFVVDSCSVEKELQTL 180

Query: 157 XXXXXXXLAQLPENALVGLVTFDSMVSVHDVGFMDCEKVVLFHGEREYSSTQ 2
                  +  LPENALVGL++FDSMV V+D+ F +C +VVLF GERE SS Q
Sbjct: 181 KNELLLVVEHLPENALVGLISFDSMVHVYDLKFSECSRVVLFPGERELSSLQ 232


>ref|XP_004150433.1| PREDICTED: protein transport protein SEC23-like [Cucumis sativus]
          Length = 783

 Score =  244 bits (622), Expect = 2e-62
 Identities = 125/232 (53%), Positives = 144/232 (62%), Gaps = 14/232 (6%)
 Frame = -2

Query: 655 MDFTELEAIEGLRWSWNSWPCSKSEAQGLVVPLSIMCTPLMQLTDLPLLNYDPLFCNRCN 476
           MDF ELEAIEGLRWSWNSWP SK E+  LV+PLS+MCTPLMQ  +LP L+Y+PL C +C 
Sbjct: 1   MDFVELEAIEGLRWSWNSWPVSKPESLALVIPLSVMCTPLMQSVELPTLSYEPLLCLKCG 60

Query: 475 SVLNPYARVEYRLRIWVCPFCYQKNSFPRSYVGIGENNLPAELFPNYSTIEY-------- 320
           +VLNPYARV+Y  RIW C FCYQKNSFPRSY GIGE NLPAELFP YST+EY        
Sbjct: 61  AVLNPYARVDYTSRIWFCSFCYQKNSFPRSYAGIGETNLPAELFPTYSTVEYAPGRKMES 120

Query: 319 ------SKVXXXXXXXXXXXXXXXXXXXXXXXLDYWKGNVGPGFVFVVDTCTPEDXXXXX 158
                 S V                               GP FVFVVD+C+ E      
Sbjct: 121 PVANSGSNVNMSPSYARNHSSSSLSVSASSSLPAGDSRGNGPAFVFVVDSCSVEKELQAL 180

Query: 157 XXXXXXXLAQLPENALVGLVTFDSMVSVHDVGFMDCEKVVLFHGEREYSSTQ 2
                  +  LPENALVGL++FDSMV V+D+ F +C +VVLF GERE SS Q
Sbjct: 181 KNELLLVVEHLPENALVGLISFDSMVHVYDLKFSECSRVVLFPGERELSSLQ 232


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