BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009681
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   298   3e-78
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   298   3e-78
emb|CBI36671.3| unnamed protein product [Vitis vinifera]              295   2e-77
ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotei...   293   1e-76
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   292   1e-76

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  298 bits (762), Expect = 3e-78
 Identities = 167/294 (56%), Positives = 205/294 (69%), Gaps = 5/294 (1%)
 Frame = +1

Query: 568  LPKGTEVSAFNGCETINVAPLLPEQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVY 747
            LP G+      G E ++V  L    L  GE  VK+S MP +AQPAF GM+ L+ V SKVY
Sbjct: 461  LPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISAMPDWAQPAFKGMTQLNRVQSKVY 520

Query: 748  RTALFTPHNILLCSPIGAGDTEVALLTILQQAV-----DPSHIARGRKIVYLAPMQARVA 912
             TALFT  N+LLC+P GAG T VA+LTILQQ       D S      KIVY+APM+A VA
Sbjct: 521  ETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVA 580

Query: 913  EVVLSLSIRLRDYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRV 1092
            EVV +LS RL+ Y+  VKEL+ + +LT QQ++E  IIVTTP+ WD+++R SGD  + Q V
Sbjct: 581  EVVGNLSNRLQHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLV 640

Query: 1093 GLMIFDEIHLLYDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQV 1272
             L+I DEIHLL+D RG VLE+IVARTV+Q ET  E IRLVGLSA LP  + E +A FL+V
Sbjct: 641  KLLIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRV 698

Query: 1273 YPSVGLFYFDNRYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQV 1434
                GLF+FDN YRPC LAQQYIG+   KP +RFQLM++ CY KV AVAG+HQV
Sbjct: 699  DLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQV 752



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 2/259 (0%)
 Frame = +1

Query: 637  EQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVYRTALFTPHNILLCSPIGAGDTEV 816
            E L+L  + V     P + +  +    H +P+ ++V+     T  N+L+ +P G+G T  
Sbjct: 1331 ELLDLQPLPVTALRNPSY-EALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTIC 1389

Query: 817  ALLTILQQAVDPSH-IARGRKIVYLAPMQARVAEVVLSLSIRL-RDYNCLVKELNWNHTL 990
            A   IL+     S  I R    VY+AP++A   E       +  R     V EL      
Sbjct: 1390 AEFAILRNHQKGSESIVRA---VYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETAT 1446

Query: 991  TCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRVGLMIFDEIHLLYDRRGAVLEAIVART 1170
              + L+   +I++TP+ WD +SR        Q+V L I DE+HL+  + G VLE IV+R 
Sbjct: 1447 DLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRM 1506

Query: 1171 VKQNETLIERIRLVGLSALLPKRDCEYLASFLQVYPSVGLFYFDNRYRPCQLAQQYIGMA 1350
                     +IR+V LS  L   + + L  ++    S GLF F    RP  L     G+ 
Sbjct: 1507 RYIASQGENKIRIVALSTSL--ANAKDLGEWIGA-TSHGLFNFPPGVRPVPLEIHIQGVD 1563

Query: 1351 SLKPFERFQLMDEQCYVKV 1407
                  R Q M +  Y  +
Sbjct: 1564 IANFEARMQAMTKPTYTAI 1582


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  298 bits (762), Expect = 3e-78
 Identities = 167/294 (56%), Positives = 205/294 (69%), Gaps = 5/294 (1%)
 Frame = +1

Query: 568  LPKGTEVSAFNGCETINVAPLLPEQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVY 747
            LP G+      G E ++V  L    L  GE  VK+S MP +AQPAF GM+ L+ V SKVY
Sbjct: 428  LPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISAMPDWAQPAFKGMTQLNRVQSKVY 487

Query: 748  RTALFTPHNILLCSPIGAGDTEVALLTILQQAV-----DPSHIARGRKIVYLAPMQARVA 912
             TALFT  N+LLC+P GAG T VA+LTILQQ       D S      KIVY+APM+A VA
Sbjct: 488  ETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVA 547

Query: 913  EVVLSLSIRLRDYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRV 1092
            EVV +LS RL+ Y+  VKEL+ + +LT QQ++E  IIVTTP+ WD+++R SGD  + Q V
Sbjct: 548  EVVGNLSNRLQHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLV 607

Query: 1093 GLMIFDEIHLLYDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQV 1272
             L+I DEIHLL+D RG VLE+IVARTV+Q ET  E IRLVGLSA LP  + E +A FL+V
Sbjct: 608  KLLIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRV 665

Query: 1273 YPSVGLFYFDNRYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQV 1434
                GLF+FDN YRPC LAQQYIG+   KP +RFQLM++ CY KV AVAG+HQV
Sbjct: 666  DLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQV 719



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 2/259 (0%)
 Frame = +1

Query: 637  EQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVYRTALFTPHNILLCSPIGAGDTEV 816
            E L+L  + V     P + +  +    H +P+ ++V+     T  N+L+ +P G+G T  
Sbjct: 1298 ELLDLQPLPVTALRNPSY-EALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTIC 1356

Query: 817  ALLTILQQAVDPSH-IARGRKIVYLAPMQARVAEVVLSLSIRL-RDYNCLVKELNWNHTL 990
            A   IL+     S  I R    VY+AP++A   E       +  R     V EL      
Sbjct: 1357 AEFAILRNHQKGSESIVRA---VYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETAT 1413

Query: 991  TCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRVGLMIFDEIHLLYDRRGAVLEAIVART 1170
              + L+   +I++TP+ WD +SR        Q+V L I DE+HL+  + G VLE IV+R 
Sbjct: 1414 DLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRM 1473

Query: 1171 VKQNETLIERIRLVGLSALLPKRDCEYLASFLQVYPSVGLFYFDNRYRPCQLAQQYIGMA 1350
                     +IR+V LS  L   + + L  ++    S GLF F    RP  L     G+ 
Sbjct: 1474 RYIASQGENKIRIVALSTSL--ANAKDLGEWIGA-TSHGLFNFPPGVRPVPLEIHIQGVD 1530

Query: 1351 SLKPFERFQLMDEQCYVKV 1407
                  R Q M +  Y  +
Sbjct: 1531 IANFEARMQAMTKPTYTAI 1549


>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score =  295 bits (755), Expect = 2e-77
 Identities = 164/283 (57%), Positives = 201/283 (71%), Gaps = 5/283 (1%)
 Frame = +1

Query: 601  GCETINVAPLLPEQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVYRTALFTPHNIL 780
            G E ++V  L    L  GE  VK+S MP +AQPAF GM+ L+ V SKVY TALFT  N+L
Sbjct: 314  GYEEVHVPALKAAALGPGEELVKISAMPDWAQPAFKGMTQLNRVQSKVYETALFTAENVL 373

Query: 781  LCSPIGAGDTEVALLTILQQAV-----DPSHIARGRKIVYLAPMQARVAEVVLSLSIRLR 945
            LC+P GAG T VA+LTILQQ       D S      KIVY+APM+A VAEVV +LS RL+
Sbjct: 374  LCAPTGAGKTNVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQ 433

Query: 946  DYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRVGLMIFDEIHLL 1125
             Y+  VKEL+ + +LT QQ++E  IIVTTP+ WD+++R SGD  + Q V L+I DEIHLL
Sbjct: 434  HYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLL 493

Query: 1126 YDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQVYPSVGLFYFDN 1305
            +D RG VLE+IVARTV+Q ET  E IRLVGLSA LP  + E +A FL+V    GLF+FDN
Sbjct: 494  HDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRVDLKKGLFHFDN 551

Query: 1306 RYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQV 1434
             YRPC LAQQYIG+   KP +RFQLM++ CY KV AVAG+HQV
Sbjct: 552  SYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQV 594


>ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Brachypodium distachyon]
          Length = 2179

 Score =  293 bits (749), Expect = 1e-76
 Identities = 166/295 (56%), Positives = 204/295 (69%), Gaps = 6/295 (2%)
 Frame = +1

Query: 568  LPKGTEVSAFNGCETINVAPLLPEQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVY 747
            LP+G+  +   G E ++V  L       GE  VK+S MP +AQPAF GM  L+ V S+VY
Sbjct: 469  LPEGSFRTPHKGYEEVHVPALKARPYGAGEKIVKISDMPGWAQPAFAGMQQLNRVQSRVY 528

Query: 748  RTALFTPHNILLCSPIGAGDTEVALLTILQQAVDPSHIARGR------KIVYLAPMQARV 909
             TALF P NILLC+P GAG T VA+LTIL Q     H+  G       KIVY+APM+A V
Sbjct: 529  DTALFKPDNILLCAPTGAGKTNVAVLTILHQI--GLHMKDGEFDNTKYKIVYVAPMKALV 586

Query: 910  AEVVLSLSIRLRDYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQR 1089
            AEVV +LS RL+D+N  V+EL+ +  LT QQ+ E  IIVTTP+ WD+V+R SGD  + Q 
Sbjct: 587  AEVVGNLSARLKDFNVTVRELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQM 646

Query: 1090 VGLMIFDEIHLLYDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQ 1269
            V L+I DEIHLL+D RG VLE+IV+RTV+Q ET  E IRLVGLSA LP  + E +A FL+
Sbjct: 647  VKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHIRLVGLSATLP--NYEDVAVFLR 704

Query: 1270 VYPSVGLFYFDNRYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQV 1434
            V  S GLF+FDN YRPC LAQQYIG+   KP +RFQLM+E CY KV A AG+HQV
Sbjct: 705  V-RSEGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNEICYEKVMAAAGKHQV 758



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 66/235 (28%), Positives = 110/235 (46%)
 Frame = +1

Query: 703  FTGMSHLSPVPSKVYRTALFTPHNILLCSPIGAGDTEVALLTILQQAVDPSHIARGRKIV 882
            ++   H +P+ ++V+     +   +L+ +P G+G T  A   IL+            ++V
Sbjct: 1358 YSAFKHFNPIQTQVFTVLYNSDDTVLVAAPTGSGKTICAEFAILRNHQKALSGETNMRVV 1417

Query: 883  YLAPMQARVAEVVLSLSIRLRDYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRN 1062
            Y+AP++A   E     S +  ++  +V EL        + L +  II++TP+ WD +SR 
Sbjct: 1418 YIAPIEALAKERYRDWSKKFGEFARVV-ELTGETAADLKLLDKGEIIISTPEKWDALSRR 1476

Query: 1063 SGDEAFAQRVGLMIFDEIHLLYDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRD 1242
                   Q+V L I DE+HL+   +G VLE IV+R  + +  +   IR+V LSA L   +
Sbjct: 1477 WKQRKHIQQVSLFIVDELHLIGSEKGHVLEIIVSRMRRISSHIGSNIRIVALSASL--GN 1534

Query: 1243 CEYLASFLQVYPSVGLFYFDNRYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKV 1407
             + L  ++    + GLF F    RP  L     G+       R Q M +  Y  V
Sbjct: 1535 AKDLGEWIGA-TAHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMAKPTYTAV 1588


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  292 bits (748), Expect = 1e-76
 Identities = 164/295 (55%), Positives = 207/295 (70%), Gaps = 6/295 (2%)
 Frame = +1

Query: 568  LPKGTEVSAFNGCETINVAPLLPEQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVY 747
            LP G+      G E I+V  L  + L+  E  VK+S+MP +AQPAF GM+ L+ V SKVY
Sbjct: 465  LPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVY 524

Query: 748  RTALFTPHNILLCSPIGAGDTEVALLTILQQAV------DPSHIARGRKIVYLAPMQARV 909
             TALF P N+LLC+P GAG T VA+LTILQQ        D S      KIVY+APM+A V
Sbjct: 525  ETALFQPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPKDGSIDHSAYKIVYVAPMKALV 584

Query: 910  AEVVLSLSIRLRDYNCLVKELNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQR 1089
            AEVV +LS RL+DY+  V+EL+ + +LT QQ++E  IIVTTP+ WD+++R SGD  + Q 
Sbjct: 585  AEVVGNLSNRLQDYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQL 644

Query: 1090 VGLMIFDEIHLLYDRRGAVLEAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQ 1269
            V L+I DEIHLL+D RG VLE+IVARTV+Q ET  + IRLVGLSA LP  + E +A FL+
Sbjct: 645  VKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLP--NYEDVALFLR 702

Query: 1270 VYPSVGLFYFDNRYRPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQV 1434
            V    GLFYFDN YRP  L+QQY+G+   KP +RFQLM++ CY KV AVAG+HQV
Sbjct: 703  VDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQV 757



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
 Frame = +1

Query: 637  EQLNLGEVQVKVSTMPCFAQPAFTGMSHLSPVPSKVYRTALFTPHNILLCSPIGAGDTEV 816
            E L+L  + V     P + +  +    H +PV ++V+     +  N+L+ +P G+G T  
Sbjct: 1336 ELLDLQPLPVTALRNPSY-ESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTIC 1394

Query: 817  ALLTILQQAVD-PSHIARGRKIVYLAPMQARVAEVVLSLSIRLRDYN--------CLVKE 969
            A   IL+     P  + R   +VY+AP+++   E       R RD+           V E
Sbjct: 1395 AEFAILRNHQKWPDSVMR---VVYVAPIESLAKE-------RYRDWEKKFGGGLKLRVVE 1444

Query: 970  LNWNHTLTCQQLQEANIIVTTPDIWDVVSRNSGDEAFAQRVGLMIFDEIHLLYDRRGAVL 1149
            L        + L++  II++TP+ WD +SR        Q+V L I DE+HL+  + G +L
Sbjct: 1445 LTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPIL 1504

Query: 1150 EAIVARTVKQNETLIERIRLVGLSALLPKRDCEYLASFLQVYPSVGLFYFDNRYRPCQLA 1329
            E +V+R       +  +IR+V LS  L   + + L  ++    S GLF F    RP  L 
Sbjct: 1505 EVVVSRMRYIASQVENKIRVVALSTSL--ANAKDLGEWIGA-TSHGLFNFPPGVRPVPLE 1561

Query: 1330 QQYIGMASLKPFERFQLMDEQCYVKV 1407
                G+       R Q M +  Y  +
Sbjct: 1562 IHIQGIDIANFEARMQAMTKPTYTAI 1587