BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009665
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884218.1| pentatricopeptide repeat-containing protein ...   100   2e-19
gb|AFK47046.1| unknown [Lotus japonicus]                               99   3e-19
ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|NP_973492.1| pentatricopeptide repeat-containing protein [Ar...    98   6e-19

>ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330058|gb|EFH60477.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 491

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 40/79 (50%), Positives = 61/79 (77%)
 Frame = -1

Query: 238 KEDLYRIWKLYKSSEILNNTSFLCMIGSLLKLDDIDGAEKILKEWESEHTYFDFRVPYLL 59
           KE++YR+W LYK  +   NT ++ +I +LLK+DDI+  EKI++EWE+ H+ FD R+P+LL
Sbjct: 298 KEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLL 357

Query: 58  VVAYCKNGHLEKAEKLINM 2
           +  YCK G +EKAE+++NM
Sbjct: 358 ITGYCKKGMMEKAEEVVNM 376


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = -1

Query: 241 SKEDLYRIWKLYKSSEILNNTSFLCMIGSLLKLDDIDGAEKILKEWESEHTYFDFRVPYL 62
           +K+++YR+W   K+ +   N+S++CM+ SLLKLDD DGAEKIL EWESEH  FD R+P L
Sbjct: 291 NKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNL 350

Query: 61  LVVAYCKNGHLEKAEKLI 8
           ++ AYCK G L+KAE  I
Sbjct: 351 MITAYCKRGLLDKAEAYI 368


>ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 334

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/79 (53%), Positives = 61/79 (77%)
 Frame = -1

Query: 241 SKEDLYRIWKLYKSSEILNNTSFLCMIGSLLKLDDIDGAEKILKEWESEHTYFDFRVPYL 62
           +K+++YR+W LY + +   N+ +LC+I SL+KLDDIDGAE+ILKEWES  T FDFR+P +
Sbjct: 135 NKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTSFDFRIPNM 194

Query: 61  LVVAYCKNGHLEKAEKLIN 5
           ++ +YC  G ++KAE  IN
Sbjct: 195 MINSYCTKGFVDKAEAYIN 213


>ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 493

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/79 (53%), Positives = 60/79 (75%)
 Frame = -1

Query: 241 SKEDLYRIWKLYKSSEILNNTSFLCMIGSLLKLDDIDGAEKILKEWESEHTYFDFRVPYL 62
           +K+++YR+W LY +     N+ +LC+I SL+KLDDIDGAE+ILKEWES  T FDFR+P +
Sbjct: 294 NKDEVYRVWNLYTNLRKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTSFDFRIPNM 353

Query: 61  LVVAYCKNGHLEKAEKLIN 5
           ++ +YC  G ++KAE  IN
Sbjct: 354 MINSYCMKGFVDKAEAYIN 372


>ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis
           thaliana] gi|330251966|gb|AEC07060.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 395

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 39/79 (49%), Positives = 61/79 (77%)
 Frame = -1

Query: 238 KEDLYRIWKLYKSSEILNNTSFLCMIGSLLKLDDIDGAEKILKEWESEHTYFDFRVPYLL 59
           KE++YR+W LYK  +   NT ++ +I +LLK+DDI+  EKI++EWE+ H+ FD R+P+LL
Sbjct: 202 KEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLL 261

Query: 58  VVAYCKNGHLEKAEKLINM 2
           +  YCK G +EKAE+++N+
Sbjct: 262 ITGYCKKGMMEKAEEVVNI 280