BLASTX nr result
ID: Coptis21_contig00009645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009645
(1936 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus ... 806 0.0
ref|XP_002267576.1| PREDICTED: U-box domain-containing protein 1... 795 0.0
ref|XP_002317390.1| predicted protein [Populus trichocarpa] gi|2... 784 0.0
ref|XP_002305723.1| predicted protein [Populus trichocarpa] gi|2... 778 0.0
ref|XP_003593822.1| U-box domain-containing protein [Medicago tr... 758 0.0
>ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223538519|gb|EEF40124.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 719
Score = 806 bits (2082), Expect = 0.0
Identities = 402/546 (73%), Positives = 470/546 (86%), Gaps = 3/546 (0%)
Frame = -3
Query: 1631 EAFLAPVHLTDITLVQTLATISSELISSFSDYSFAFQKRNSRSLIRKIEIFVILFEFLTD 1452
EAFLAPV LTD+ LVQTL ++S+EL++ FS S FQ++NSRSLIRKIE FV+L E+LT+
Sbjct: 19 EAFLAPVDLTDVALVQTLVSVSTELVACFSGKSMFFQRKNSRSLIRKIEFFVVLLEYLTE 78
Query: 1451 CG---KFRLPKSAMLCFKEMYLLLYRSKMLLDYCSQSSKLWLLLQNSLISGHFHDLNQEI 1281
G +L + ++CFKE+YLLLYRSK+LLDYC+QSSKLWLLLQN ISGHFHDLNQEI
Sbjct: 79 SGIGSSTKLSSTGIVCFKELYLLLYRSKILLDYCTQSSKLWLLLQNQSISGHFHDLNQEI 138
Query: 1280 STLLDVFPLRELDLSQDVREQIELLRKQCTRTKLFIDQRDETLRVGLFSFLDEFEKGRIP 1101
STLLDVFPL +++LS+DVREQIEL++KQ + +L+ID++DE LRV LFSFLDEFE GRIP
Sbjct: 139 STLLDVFPLNDIELSEDVREQIELMQKQARKARLYIDEKDEALRVKLFSFLDEFENGRIP 198
Query: 1100 DRGELRIFFVDKLGIRDARICRSEIEFLEEQIYNHEGDVEPTASVLNGFVALTRYCRFLL 921
+ +LR+FFVD LGI DA+ CR+EIEFLEEQI NHEGD+EPTASVLNG VA+TRYCRFLL
Sbjct: 199 NLVDLRLFFVDSLGIGDAKSCRAEIEFLEEQIVNHEGDIEPTASVLNGLVAITRYCRFLL 258
Query: 920 FGIKEEEGEMGFVNRKKLRKGVISQEIGETFHMIQKDFCCPISLDLMQDPVIVSTGQTYD 741
FG +E E E+ F N+KK RKG+I+QEI +TF + KDFCCPISLDLM+DPVI+STGQTYD
Sbjct: 259 FGFEENEAELQFGNQKKPRKGLITQEIADTFITVPKDFCCPISLDLMKDPVIISTGQTYD 318
Query: 740 RYSISRWMEEGHCSCPKTGQMLDHTRLVPNRALRSLIIHWCTAHGIPFDALENTDMSMEV 561
R SISRW+EEGHC+CPKTGQML +TR VPNRALR+LI+ WCTAHGIP++ ENTD S E
Sbjct: 319 RSSISRWVEEGHCTCPKTGQMLINTRFVPNRALRNLIVQWCTAHGIPYEPPENTDSSAEG 378
Query: 560 VTGAASTKAAIEANRATAELLIHQLSNGSQGAKTVAARELRLLAKTGKENRACIAEAGAI 381
A+ TKAAIEANRATA LLI QL+NGSQ AKT AARE+RLLAKTGKENRA IAEAGAI
Sbjct: 379 FAAASPTKAAIEANRATATLLIQQLANGSQNAKTTAAREIRLLAKTGKENRAFIAEAGAI 438
Query: 380 PLLHKLLPSPNPIAQENSVTAILNLSIHDKNKSRIMEEAGCLGAIVEVLRFGLTTEAKEN 201
P L LL SPNP+AQENSVTA+LNLSI+DKNKSRIM+E GCLG+IVEVLRFGLTTEA+EN
Sbjct: 439 PHLRNLLSSPNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVEVLRFGLTTEAREN 498
Query: 200 AAATLFSLSAVHDYKKRISDEKGAVEALVELLKEGSLRGKKDAVTALFNLSTHVDNCRRM 21
AAATLFSLSAVHDYKKRI+DE GA+EAL LL G+ RGKKDAVTALFNLSTH +NC RM
Sbjct: 499 AAATLFSLSAVHDYKKRIADEGGAIEALAGLLGVGTSRGKKDAVTALFNLSTHTENCARM 558
Query: 20 MESGAV 3
+++GAV
Sbjct: 559 IKAGAV 564
>ref|XP_002267576.1| PREDICTED: U-box domain-containing protein 17 [Vitis vinifera]
Length = 714
Score = 795 bits (2054), Expect = 0.0
Identities = 404/543 (74%), Positives = 464/543 (85%)
Frame = -3
Query: 1631 EAFLAPVHLTDITLVQTLATISSELISSFSDYSFAFQKRNSRSLIRKIEIFVILFEFLTD 1452
EAFLAPV L ++ LV+TLATIS ELI +FSD + FQ++NSRSLIRKIE+F++L EFL D
Sbjct: 19 EAFLAPVDLNEVALVRTLATISMELIFAFSDRPWPFQRKNSRSLIRKIEVFLVLLEFLRD 78
Query: 1451 CGKFRLPKSAMLCFKEMYLLLYRSKMLLDYCSQSSKLWLLLQNSLISGHFHDLNQEISTL 1272
C LP +A+LCFKE+YLLLYRSK+LLDYC QSSKLWLLLQN ISGHFHDLNQEISTL
Sbjct: 79 CN-LSLPSAAVLCFKELYLLLYRSKILLDYCLQSSKLWLLLQNQSISGHFHDLNQEISTL 137
Query: 1271 LDVFPLRELDLSQDVREQIELLRKQCTRTKLFIDQRDETLRVGLFSFLDEFEKGRIPDRG 1092
LDVFP+ EL+L++D+REQ+ELL+KQ R KLF+D+ DE LR+ L+SFLD+F GRIPD
Sbjct: 138 LDVFPMEELELTEDIREQLELLQKQVRRAKLFLDKNDEGLRLRLYSFLDDFGSGRIPDPV 197
Query: 1091 ELRIFFVDKLGIRDARICRSEIEFLEEQIYNHEGDVEPTASVLNGFVALTRYCRFLLFGI 912
ELR+FFVD+LGIRDA+ CR+EIEFLEEQIY+HEGDVEP +VLNGFVALTRYCRFLLFG
Sbjct: 198 ELRLFFVDRLGIRDAKSCRAEIEFLEEQIYSHEGDVEPNVAVLNGFVALTRYCRFLLFGF 257
Query: 911 KEEEGEMGFVNRKKLRKGVISQEIGETFHMIQKDFCCPISLDLMQDPVIVSTGQTYDRYS 732
+E E EM F KK RKG+I+QEIG+TF + KDFCCPISLD+M+DPVI+STGQTYDR S
Sbjct: 258 EESEVEMSF-GIKKPRKGLITQEIGDTFITVPKDFCCPISLDVMRDPVIISTGQTYDRTS 316
Query: 731 ISRWMEEGHCSCPKTGQMLDHTRLVPNRALRSLIIHWCTAHGIPFDALENTDMSMEVVTG 552
ISRWMEEGHCSCPKTGQML H RLVPNRALR+LI WCTA+GI D ++ D +E
Sbjct: 317 ISRWMEEGHCSCPKTGQMLAHPRLVPNRALRNLITQWCTAYGITLDPPDSPDSVVETFAA 376
Query: 551 AASTKAAIEANRATAELLIHQLSNGSQGAKTVAARELRLLAKTGKENRACIAEAGAIPLL 372
A TKAAIEAN+ATA LL+ QL++GSQGAKTVAARE+RLLAKTGKENRA IAEAGAIP L
Sbjct: 377 ALPTKAAIEANKATAALLVQQLASGSQGAKTVAAREIRLLAKTGKENRAYIAEAGAIPHL 436
Query: 371 HKLLPSPNPIAQENSVTAILNLSIHDKNKSRIMEEAGCLGAIVEVLRFGLTTEAKENAAA 192
KLL SPN +AQENSVTA+LNLSI+DKNKSRIM+E GCLG IVEVL FG TTEA+ENAAA
Sbjct: 437 LKLLSSPNSVAQENSVTAMLNLSIYDKNKSRIMDEDGCLGLIVEVLIFGHTTEARENAAA 496
Query: 191 TLFSLSAVHDYKKRISDEKGAVEALVELLKEGSLRGKKDAVTALFNLSTHVDNCRRMMES 12
TLFSLSAVHDYKKRI+DE GAVEAL LL+EG+ RG+KDAVTALFNLSTH DNC RM+ S
Sbjct: 497 TLFSLSAVHDYKKRIADEGGAVEALAGLLREGTPRGRKDAVTALFNLSTHTDNCARMVAS 556
Query: 11 GAV 3
GAV
Sbjct: 557 GAV 559
>ref|XP_002317390.1| predicted protein [Populus trichocarpa] gi|222860455|gb|EEE98002.1|
predicted protein [Populus trichocarpa]
Length = 675
Score = 784 bits (2024), Expect = 0.0
Identities = 397/544 (72%), Positives = 462/544 (84%), Gaps = 1/544 (0%)
Frame = -3
Query: 1631 EAFLAPVHLTDITLVQTLATISSELISSFSDYSFAFQKRNSRSLIRKIEIFVILFEFLTD 1452
EAFLAPV LTD+ LVQTL ++S+EL+S FS S FQ++NSRSLIRKIE+FV+L E+L D
Sbjct: 19 EAFLAPVDLTDVALVQTLVSVSTELVSCFSGKSLFFQRKNSRSLIRKIEVFVVLLEYLRD 78
Query: 1451 CGK-FRLPKSAMLCFKEMYLLLYRSKMLLDYCSQSSKLWLLLQNSLISGHFHDLNQEIST 1275
G L ++CFKE+YLLLYRSK+LLD C QSSKLWLLLQN ISGHFHDLNQEIST
Sbjct: 79 SGAGSALSPPTIVCFKELYLLLYRSKILLDCCVQSSKLWLLLQNHTISGHFHDLNQEIST 138
Query: 1274 LLDVFPLRELDLSQDVREQIELLRKQCTRTKLFIDQRDETLRVGLFSFLDEFEKGRIPDR 1095
LLDVFPL +++LS+DVREQI+L+ KQ + LFID+ +E LRV FSFLDEFEKG+IP+
Sbjct: 139 LLDVFPLDDVELSEDVREQIDLMHKQSRKATLFIDKEEEDLRVSFFSFLDEFEKGKIPNM 198
Query: 1094 GELRIFFVDKLGIRDARICRSEIEFLEEQIYNHEGDVEPTASVLNGFVALTRYCRFLLFG 915
+LR+FFV+ LGI+DA+ R+EIEFLEEQI NHEGD+EPTASVLNGFVA+ RYCRFLL+G
Sbjct: 199 VDLRMFFVEGLGIKDAKSSRAEIEFLEEQIVNHEGDIEPTASVLNGFVAIARYCRFLLYG 258
Query: 914 IKEEEGEMGFVNRKKLRKGVISQEIGETFHMIQKDFCCPISLDLMQDPVIVSTGQTYDRY 735
+E E E+ N+KKLRKG+ISQEI ETF I KDFCCPISLDLM+DPVI+STGQTYDR
Sbjct: 259 FEENEVELQIGNQKKLRKGLISQEIAETFITIPKDFCCPISLDLMRDPVIISTGQTYDRS 318
Query: 734 SISRWMEEGHCSCPKTGQMLDHTRLVPNRALRSLIIHWCTAHGIPFDALENTDMSMEVVT 555
ISRWMEEGHC+CPKTGQML +TRLVPNRALR+LI+ WCTAHGIP+D ENTD +E
Sbjct: 319 LISRWMEEGHCTCPKTGQMLMNTRLVPNRALRNLIVQWCTAHGIPYDPPENTDSLVEAFA 378
Query: 554 GAASTKAAIEANRATAELLIHQLSNGSQGAKTVAARELRLLAKTGKENRACIAEAGAIPL 375
A +KAAIEANRATA LLIH+L++GSQ AKTVAAR +RLLAK+G+ENRA IAEAGAIP
Sbjct: 379 AAMPSKAAIEANRATATLLIHKLASGSQHAKTVAARGIRLLAKSGRENRAFIAEAGAIPH 438
Query: 374 LHKLLPSPNPIAQENSVTAILNLSIHDKNKSRIMEEAGCLGAIVEVLRFGLTTEAKENAA 195
L LL S N +AQENSVTAILNLSIHDKNKS+IM+E GCLG+IV VLRFGLTTEA+ENAA
Sbjct: 439 LRNLLSSTNSVAQENSVTAILNLSIHDKNKSQIMDETGCLGSIVGVLRFGLTTEARENAA 498
Query: 194 ATLFSLSAVHDYKKRISDEKGAVEALVELLKEGSLRGKKDAVTALFNLSTHVDNCRRMME 15
ATLFSLSAVHDYKKRI+DE+GAVEAL LL+ G+ RGKKDAVTALFNLSTH +NC RM+E
Sbjct: 499 ATLFSLSAVHDYKKRIADEEGAVEALAGLLRAGTPRGKKDAVTALFNLSTHTENCLRMIE 558
Query: 14 SGAV 3
+GAV
Sbjct: 559 AGAV 562
>ref|XP_002305723.1| predicted protein [Populus trichocarpa] gi|222848687|gb|EEE86234.1|
predicted protein [Populus trichocarpa]
Length = 674
Score = 778 bits (2010), Expect = 0.0
Identities = 395/544 (72%), Positives = 460/544 (84%), Gaps = 1/544 (0%)
Frame = -3
Query: 1631 EAFLAPVHLTDITLVQTLATISSELISSFSDYSFAFQKRNSRSLIRKIEIFVILFEFLTD 1452
E FLAPV TD+ LVQTL ++S+EL+SSFS S FQ++NSRSLIRKIEIFV+L E+L D
Sbjct: 19 EVFLAPVDFTDVGLVQTLVSLSTELVSSFSGKSLFFQRKNSRSLIRKIEIFVVLLEYLRD 78
Query: 1451 CGK-FRLPKSAMLCFKEMYLLLYRSKMLLDYCSQSSKLWLLLQNSLISGHFHDLNQEIST 1275
G L CFKE+YLLLYRSK+LLDYC +SSKLWLLLQN ISGHFHDLNQEIST
Sbjct: 79 SGVGSALSSPTFACFKELYLLLYRSKILLDYCVRSSKLWLLLQNHSISGHFHDLNQEIST 138
Query: 1274 LLDVFPLRELDLSQDVREQIELLRKQCTRTKLFIDQRDETLRVGLFSFLDEFEKGRIPDR 1095
LLDVFPL +++LS+DVREQI+L++ Q RT+L ID+ +E LRV LFSFLDEFE GRIP
Sbjct: 139 LLDVFPLDDVELSEDVREQIDLMQTQSRRTRLLIDKDEEALRVRLFSFLDEFENGRIPGL 198
Query: 1094 GELRIFFVDKLGIRDARICRSEIEFLEEQIYNHEGDVEPTASVLNGFVALTRYCRFLLFG 915
ELR+FFV+ LGI+DA+ C +EIEFLEEQI +HEGD+EPT SVLNGFVA+ RYCRFLL+G
Sbjct: 199 AELRLFFVEGLGIKDAKSCITEIEFLEEQIVSHEGDIEPTTSVLNGFVAIARYCRFLLYG 258
Query: 914 IKEEEGEMGFVNRKKLRKGVISQEIGETFHMIQKDFCCPISLDLMQDPVIVSTGQTYDRY 735
E E E+ N+KK RKG+I+QEI ETF I KDF CPISLDLM+DPVI+STGQTYDR
Sbjct: 259 FGENEVELQIGNQKKRRKGLIAQEIAETFITIPKDFFCPISLDLMRDPVIISTGQTYDRS 318
Query: 734 SISRWMEEGHCSCPKTGQMLDHTRLVPNRALRSLIIHWCTAHGIPFDALENTDMSMEVVT 555
SISRWM+EGHC+CPKTGQ+L +TRLVPNRALR+LI+ WCTAHGIP+D ENTD S+E
Sbjct: 319 SISRWMDEGHCTCPKTGQILMNTRLVPNRALRNLIVQWCTAHGIPYDPPENTDSSVEAFA 378
Query: 554 GAASTKAAIEANRATAELLIHQLSNGSQGAKTVAARELRLLAKTGKENRACIAEAGAIPL 375
+KAAIEANRATA LLIHQL+NGSQGAKTVAAR +RLLAKTG+ENRA IAEAGAIP
Sbjct: 379 ATMPSKAAIEANRATATLLIHQLANGSQGAKTVAARGIRLLAKTGRENRAFIAEAGAIPY 438
Query: 374 LHKLLPSPNPIAQENSVTAILNLSIHDKNKSRIMEEAGCLGAIVEVLRFGLTTEAKENAA 195
L +LL S N +AQENSVTAILNLSI++KNKSRIM+E GCLG+IVEVLRFGLTTEA+ENAA
Sbjct: 439 LCELLSSTNSVAQENSVTAILNLSIYEKNKSRIMDEKGCLGSIVEVLRFGLTTEARENAA 498
Query: 194 ATLFSLSAVHDYKKRISDEKGAVEALVELLKEGSLRGKKDAVTALFNLSTHVDNCRRMME 15
A LFSLSAVHDYKKRI+DE+GAVEAL LL++G+ RGKKDAVTALFNLSTH +NC RM+E
Sbjct: 499 AALFSLSAVHDYKKRIADEEGAVEALAGLLRKGTPRGKKDAVTALFNLSTHTENCVRMIE 558
Query: 14 SGAV 3
+GA+
Sbjct: 559 AGAI 562
>ref|XP_003593822.1| U-box domain-containing protein [Medicago truncatula]
gi|355482870|gb|AES64073.1| U-box domain-containing
protein [Medicago truncatula]
Length = 737
Score = 758 bits (1956), Expect = 0.0
Identities = 383/546 (70%), Positives = 449/546 (82%), Gaps = 3/546 (0%)
Frame = -3
Query: 1631 EAFLAPVHLTDITLVQTLATISSELISSFSDYSFAFQKRNSRSLIRKIEIFVILFEFLTD 1452
EAFLAPV L+D+ LVQTL T+ +EL+ FS SF FQ++N+RSLIRK+E+F +L E+L D
Sbjct: 19 EAFLAPVDLSDVALVQTLVTVVNELVCCFSKRSFFFQRKNTRSLIRKVEVFQVLLEYLND 78
Query: 1451 CGKFR---LPKSAMLCFKEMYLLLYRSKMLLDYCSQSSKLWLLLQNSLISGHFHDLNQEI 1281
G LP + +LC KE+YLLLYRSK+LLDYC+QSSKLWLLLQN ISGHFHDLNQEI
Sbjct: 79 SGSGSGSVLPATGLLCLKELYLLLYRSKILLDYCAQSSKLWLLLQNHSISGHFHDLNQEI 138
Query: 1280 STLLDVFPLRELDLSQDVREQIELLRKQCTRTKLFIDQRDETLRVGLFSFLDEFEKGRIP 1101
STLLDVFP++++ LS+DVREQIELL KQ R KLFID D+ LRV F FLD+FE GRIP
Sbjct: 139 STLLDVFPVKDVCLSKDVREQIELLLKQSRRAKLFIDMEDDALRVRFFEFLDQFENGRIP 198
Query: 1100 DRGELRIFFVDKLGIRDARICRSEIEFLEEQIYNHEGDVEPTASVLNGFVALTRYCRFLL 921
D ELR F+VDKL I DA CR+EIE LEEQI NHEGD+EPT SVL G VA+TRYCRFL+
Sbjct: 199 DSEELRSFYVDKLQIMDAACCRTEIEALEEQIVNHEGDIEPTVSVLKGLVAMTRYCRFLI 258
Query: 920 FGIKEEEGEMGFVNRKKLRKGVISQEIGETFHMIQKDFCCPISLDLMQDPVIVSTGQTYD 741
FG +E+E +M ++KK++KG+I+QEI +TF + KDFCCPISLDLM+DPVI+STGQTYD
Sbjct: 259 FGFEEDELDMENGSQKKIKKGLITQEIADTFLTVPKDFCCPISLDLMRDPVIISTGQTYD 318
Query: 740 RYSISRWMEEGHCSCPKTGQMLDHTRLVPNRALRSLIIHWCTAHGIPFDALENTDMSMEV 561
R SISRWM+EGH +CPKTGQ L HTRLVPNRALR+LI+ WC+AHGIP + E + E
Sbjct: 319 RSSISRWMDEGHTTCPKTGQTLAHTRLVPNRALRNLIVQWCSAHGIPLEPPEVMEAMGEA 378
Query: 560 VTGAASTKAAIEANRATAELLIHQLSNGSQGAKTVAARELRLLAKTGKENRACIAEAGAI 381
A TKAA+EANRATA LLI QL+NGSQ KTVAARE+RLLAKTG+ENRA +AEAGAI
Sbjct: 379 FASACPTKAALEANRATANLLIQQLANGSQSGKTVAAREIRLLAKTGRENRAFLAEAGAI 438
Query: 380 PLLHKLLPSPNPIAQENSVTAILNLSIHDKNKSRIMEEAGCLGAIVEVLRFGLTTEAKEN 201
P L LL SPN +AQENSVTA+LNLSI+DKNKSRIM+EA CL +IV VLRFG TTEA+EN
Sbjct: 439 PYLRDLLSSPNSVAQENSVTALLNLSIYDKNKSRIMDEASCLVSIVNVLRFGHTTEAREN 498
Query: 200 AAATLFSLSAVHDYKKRISDEKGAVEALVELLKEGSLRGKKDAVTALFNLSTHVDNCRRM 21
AAATLFSLSAVHDYKK I+DE GAVEAL LL++G+ RGKKDAVTALFNLSTH DNC RM
Sbjct: 499 AAATLFSLSAVHDYKKIIADETGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTDNCVRM 558
Query: 20 MESGAV 3
+E+GAV
Sbjct: 559 IEAGAV 564
Score = 58.9 bits (141), Expect = 5e-06
Identities = 48/139 (34%), Positives = 71/139 (51%)
Frame = -3
Query: 467 AKTVAARELRLLAKTGKENRACIAEAGAIPLLHKLLPSPNPIAQENSVTAILNLSIHDKN 288
A+ AA L L+ + E GA+ L LL P ++++VTA+ NLS H N
Sbjct: 495 ARENAAATLFSLSAVHDYKKIIADETGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTDN 554
Query: 287 KSRIMEEAGCLGAIVEVLRFGLTTEAKENAAATLFSLSAVHDYKKRISDEKGAVEALVEL 108
R M EAG + A+VE L G A+E A A + K ++ E+ AV L+ +
Sbjct: 555 CVR-MIEAGAVTALVEAL--GNEGVAEEAAGAIALIVRQPFGAKALVNQEE-AVAGLIGM 610
Query: 107 LKEGSLRGKKDAVTALFNL 51
++ G+ RGK++AV AL L
Sbjct: 611 MRCGTPRGKENAVAALLEL 629