BLASTX nr result

ID: Coptis21_contig00009644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009644
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP03882.1| Avr9/Cf-9 rapidly elicited protein 276 [Nicotiana...   175   4e-42
ref|XP_002267576.1| PREDICTED: U-box domain-containing protein 1...   173   1e-41
ref|XP_003546044.1| PREDICTED: U-box domain-containing protein 1...   171   7e-41
ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus ...   170   1e-40
emb|CBI30726.3| unnamed protein product [Vitis vinifera]              170   1e-40

>gb|AAP03882.1| Avr9/Cf-9 rapidly elicited protein 276 [Nicotiana tabacum]
          Length = 726

 Score =  175 bits (443), Expect = 4e-42
 Identities = 98/161 (60%), Positives = 111/161 (68%)
 Frame = -3

Query: 510  MESGAVTALXXXXXXXXXXXXXXXXXXXXVRQPIGAEAVGKEEMAVSGLLGMMRRGTPKG 331
            +E GA+TAL                    VRQPIGA AVG EEMAV+GL+GMMR GTP+G
Sbjct: 566  IELGAITALVGALGSEGVAEEAAGALALIVRQPIGAAAVGNEEMAVAGLIGMMRCGTPRG 625

Query: 330  KENAVAALLELCRSGGTATTQRVVRAPALASLLQTLLFTGTXXXXXXXXXXXRVCQRCEA 151
            KENAVAALLELCR GG A T+RV++APALASLLQTLLFTGT           RV QRCE 
Sbjct: 626  KENAVAALLELCRGGGAAATERVLKAPALASLLQTLLFTGTKRARRKAASLARVFQRCEH 685

Query: 150  AALPTGGWGVGYALTGNSTTNHGSSFAGDVSLPLSISVPVL 28
            A++  GG GVGYA  GNS T   S+FAGDVS+ +SISVPVL
Sbjct: 686  ASMHYGGLGVGYAFAGNSATVRDSTFAGDVSVSMSISVPVL 726


>ref|XP_002267576.1| PREDICTED: U-box domain-containing protein 17 [Vitis vinifera]
          Length = 714

 Score =  173 bits (438), Expect = 1e-41
 Identities = 98/159 (61%), Positives = 111/159 (69%)
 Frame = -3

Query: 504  SGAVTALXXXXXXXXXXXXXXXXXXXXVRQPIGAEAVGKEEMAVSGLLGMMRRGTPKGKE 325
            SGAVTAL                    VR+PIGAEAVG+EEMAV+GLLGMMR GTP+GKE
Sbjct: 556  SGAVTALVAALGTEGVAEEAAGALALIVRRPIGAEAVGREEMAVAGLLGMMRCGTPRGKE 615

Query: 324  NAVAALLELCRSGGTATTQRVVRAPALASLLQTLLFTGTXXXXXXXXXXXRVCQRCEAAA 145
            NAVAALLELCRSGGTA T+RV++APALA LLQTLLFTGT           RV QRCE AA
Sbjct: 616  NAVAALLELCRSGGTAATERVLKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCENAA 675

Query: 144  LPTGGWGVGYALTGNSTTNHGSSFAGDVSLPLSISVPVL 28
            L  GG GVGYA   NS+ N  +SF+ +VS+ + ISVPVL
Sbjct: 676  LHFGGLGVGYAFARNSSANTDASFSSEVSMQMPISVPVL 714


>ref|XP_003546044.1| PREDICTED: U-box domain-containing protein 17-like [Glycine max]
          Length = 716

 Score =  171 bits (432), Expect = 7e-41
 Identities = 95/158 (60%), Positives = 109/158 (68%)
 Frame = -3

Query: 510  MESGAVTALXXXXXXXXXXXXXXXXXXXXVRQPIGAEAVGKEEMAVSGLLGMMRRGTPKG 331
            +E+GAVTAL                    VRQPIGA+AV  EE AV+GL+GMMR GTP+G
Sbjct: 558  IEAGAVTALVGALGNEGVAEEAAGALALIVRQPIGAKAVVNEESAVAGLIGMMRCGTPRG 617

Query: 330  KENAVAALLELCRSGGTATTQRVVRAPALASLLQTLLFTGTXXXXXXXXXXXRVCQRCEA 151
            KEN VAALLELCRSGG A T+RVV+APALA LLQTLLFTGT           RV QRCE 
Sbjct: 618  KENVVAALLELCRSGGAAATERVVKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCEH 677

Query: 150  AALPTGGWGVGYALTGNSTTNHGSSFAGDVSLPLSISV 37
            A++  GG G+GYA  GNSTT   +SFAGDVS+P+SISV
Sbjct: 678  ASVHYGGLGIGYAFAGNSTTTRDTSFAGDVSVPMSISV 715


>ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223538519|gb|EEF40124.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 719

 Score =  170 bits (431), Expect = 1e-40
 Identities = 95/161 (59%), Positives = 109/161 (67%)
 Frame = -3

Query: 510  MESGAVTALXXXXXXXXXXXXXXXXXXXXVRQPIGAEAVGKEEMAVSGLLGMMRRGTPKG 331
            +++GAVTAL                    VRQP+GAEAVG EEMAV+GL+GMMR G+P+G
Sbjct: 559  IKAGAVTALVGALGNEGVAEEAAGALALIVRQPVGAEAVGSEEMAVAGLIGMMRCGSPRG 618

Query: 330  KENAVAALLELCRSGGTATTQRVVRAPALASLLQTLLFTGTXXXXXXXXXXXRVCQRCEA 151
            KENAVAALLELCRSGG A T+RV+RAP LA L+QTLLFTGT           RV QR E 
Sbjct: 619  KENAVAALLELCRSGGAAATERVLRAPTLAGLIQTLLFTGTKRARRKAASLARVFQRREN 678

Query: 150  AALPTGGWGVGYALTGNSTTNHGSSFAGDVSLPLSISVPVL 28
             AL  GG G GYA  GNS T   +SF GDVS+P+SISVPVL
Sbjct: 679  HALHFGGLGAGYAFAGNSATTRDTSFVGDVSVPMSISVPVL 719


>emb|CBI30726.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  170 bits (430), Expect = 1e-40
 Identities = 96/157 (61%), Positives = 109/157 (69%)
 Frame = -3

Query: 504 SGAVTALXXXXXXXXXXXXXXXXXXXXVRQPIGAEAVGKEEMAVSGLLGMMRRGTPKGKE 325
           SGAVTAL                    VR+PIGAEAVG+EEMAV+GLLGMMR GTP+GKE
Sbjct: 457 SGAVTALVAALGTEGVAEEAAGALALIVRRPIGAEAVGREEMAVAGLLGMMRCGTPRGKE 516

Query: 324 NAVAALLELCRSGGTATTQRVVRAPALASLLQTLLFTGTXXXXXXXXXXXRVCQRCEAAA 145
           NAVAALLELCRSGGTA T+RV++APALA LLQTLLFTGT           RV QRCE AA
Sbjct: 517 NAVAALLELCRSGGTAATERVLKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCENAA 576

Query: 144 LPTGGWGVGYALTGNSTTNHGSSFAGDVSLPLSISVP 34
           L  GG GVGYA   NS+ N  +SF+ +VS+ + ISVP
Sbjct: 577 LHFGGLGVGYAFARNSSANTDASFSSEVSMQMPISVP 613


Top