BLASTX nr result

ID: Coptis21_contig00009636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009636
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254...   342   1e-91
emb|CBI19243.3| unnamed protein product [Vitis vinifera]              342   1e-91
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   297   3e-78
ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242...   296   4e-78
ref|XP_002514019.1| conserved hypothetical protein [Ricinus comm...   291   2e-76

>ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254008 [Vitis vinifera]
          Length = 1304

 Score =  342 bits (876), Expect = 1e-91
 Identities = 181/327 (55%), Positives = 220/327 (67%), Gaps = 2/327 (0%)
 Frame = -1

Query: 977  TYTSDGYSSGVPSRVNVDNPAGKDCFVRNLQNQKLSD--DDVRSAPPICSSGLEANEGAG 804
            +Y S+GY+S VPS VN      KD   + L  +  SD  DDV SAPP C SG + NE A 
Sbjct: 252  SYASEGYTSSVPSWVNAGRATKKDSHAKTLPKESFSDGDDDVPSAPPFCGSGQKINESAK 311

Query: 803  QHLTSRTQGNPCXXXXXXXXXXXXXXXSENIASANGAQCNSGERIPDQSGRTSGGVDAPV 624
            Q   S  Q  PC                 ++   N ++  +G  +PD+  RT+   +A V
Sbjct: 312  QVSPSGEQSKPCAAGSHGFSTKNGPDTLRSVPGFN-SEDKTGMGVPDKFVRTTASAEADV 370

Query: 623  SVSSFPALLPTFHASAQGPWCAVISYDACVRLCLNLWARGCAEAPIFLENECELLRNAFG 444
              SS PA LPTFHASAQGPW AVI+YDACVRLCL+ WA GC +AP+FLE+EC LLRNAFG
Sbjct: 371  PSSSHPARLPTFHASAQGPWHAVIAYDACVRLCLHAWAGGCMDAPMFLESECALLRNAFG 430

Query: 443  LQKVLLQSEEEILAKRSSELISEGTVLKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKL 264
            LQ+VLLQSEEE+L KRSSEL SEGTV KPKKIIGK+KVQVRK+KM+LDPP+ C+  SL+ 
Sbjct: 431  LQQVLLQSEEELLVKRSSELASEGTVPKPKKIIGKMKVQVRKVKMSLDPPSGCSMSSLRA 490

Query: 263  PTIRTDALRHHXXXXXXXXXSGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVS 84
            PTI+ ++LR+          SG  +L  + V PR+   GSFSR SLAYV+AS+QY+KQVS
Sbjct: 491  PTIKLESLRYRLSNLRSTFSSGWQALRRIHVVPRIPANGSFSRKSLAYVHASSQYIKQVS 550

Query: 83   GLLKVGVTTLRSGSSSYEVVQEKYCCL 3
            GLLK GVTTLRS  SSYE VQE Y C+
Sbjct: 551  GLLKTGVTTLRSSPSSYEGVQETYSCM 577


>emb|CBI19243.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  342 bits (876), Expect = 1e-91
 Identities = 181/327 (55%), Positives = 220/327 (67%), Gaps = 2/327 (0%)
 Frame = -1

Query: 977  TYTSDGYSSGVPSRVNVDNPAGKDCFVRNLQNQKLSD--DDVRSAPPICSSGLEANEGAG 804
            +Y S+GY+S VPS VN      KD   + L  +  SD  DDV SAPP C SG + NE A 
Sbjct: 203  SYASEGYTSSVPSWVNAGRATKKDSHAKTLPKESFSDGDDDVPSAPPFCGSGQKINESAK 262

Query: 803  QHLTSRTQGNPCXXXXXXXXXXXXXXXSENIASANGAQCNSGERIPDQSGRTSGGVDAPV 624
            Q   S  Q  PC                 ++   N ++  +G  +PD+  RT+   +A V
Sbjct: 263  QVSPSGEQSKPCAAGSHGFSTKNGPDTLRSVPGFN-SEDKTGMGVPDKFVRTTASAEADV 321

Query: 623  SVSSFPALLPTFHASAQGPWCAVISYDACVRLCLNLWARGCAEAPIFLENECELLRNAFG 444
              SS PA LPTFHASAQGPW AVI+YDACVRLCL+ WA GC +AP+FLE+EC LLRNAFG
Sbjct: 322  PSSSHPARLPTFHASAQGPWHAVIAYDACVRLCLHAWAGGCMDAPMFLESECALLRNAFG 381

Query: 443  LQKVLLQSEEEILAKRSSELISEGTVLKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKL 264
            LQ+VLLQSEEE+L KRSSEL SEGTV KPKKIIGK+KVQVRK+KM+LDPP+ C+  SL+ 
Sbjct: 382  LQQVLLQSEEELLVKRSSELASEGTVPKPKKIIGKMKVQVRKVKMSLDPPSGCSMSSLRA 441

Query: 263  PTIRTDALRHHXXXXXXXXXSGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVS 84
            PTI+ ++LR+          SG  +L  + V PR+   GSFSR SLAYV+AS+QY+KQVS
Sbjct: 442  PTIKLESLRYRLSNLRSTFSSGWQALRRIHVVPRIPANGSFSRKSLAYVHASSQYIKQVS 501

Query: 83   GLLKVGVTTLRSGSSSYEVVQEKYCCL 3
            GLLK GVTTLRS  SSYE VQE Y C+
Sbjct: 502  GLLKTGVTTLRSSPSSYEGVQETYSCM 528


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  297 bits (760), Expect = 3e-78
 Identities = 165/305 (54%), Positives = 201/305 (65%), Gaps = 2/305 (0%)
 Frame = -1

Query: 911  KDCFVRNLQNQKLS-DDDVRSAPPICSSGLEANEGAGQHLTSRTQGNPCXXXXXXXXXXX 735
            +D + R +Q  KLS DDD+ SAPP   S LE N+   Q   S    N             
Sbjct: 847  QDVYARGMQ--KLSGDDDIPSAPPFVGSSLEINQDRDQISXSTVTINE------------ 892

Query: 734  XXXXSENIASANGAQCNSGERIPDQSGRTSGGVDAPVSVSSFPALLPTFHASAQGPWCAV 555
                ++NI S+  AQ NSG RIPD S   +   +   S  S PA LPTFHAS QGPWCAV
Sbjct: 893  -PNTTKNIPSSTTAQENSGNRIPDPSASIA---ETTASSGSLPARLPTFHASGQGPWCAV 948

Query: 554  ISYDACVRLCLNLWARGCAEAPIFLENECELLRNAFGLQKVLLQSEEEILAKRSSELISE 375
            ISYDACVRLCL+ WA GC EAP+FL+NEC LLRNAFGL++VLLQSEEE+LA+RSS+++SE
Sbjct: 949  ISYDACVRLCLHSWAGGCMEAPLFLDNECALLRNAFGLEQVLLQSEEELLARRSSDIVSE 1008

Query: 374  GTVLKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRTDALRHHXXXXXXXXXSGC 195
            G   KPKKIIGK+KVQ RK+KMA DPPT C+F SLK P I  ++             SG 
Sbjct: 1009 GVAPKPKKIIGKMKVQTRKVKMARDPPTGCSFTSLKQPKINMESFWFRCSKLKSTLHSGW 1068

Query: 194  NSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKVGVTTL-RSGSSSYEVVQE 18
             ++  V  APR+   GSFS  SLAY++AST+Y+KQVSGLLK+GVT++  +GS SYE VQE
Sbjct: 1069 VAVRKVNFAPRIPVNGSFSSRSLAYMHASTRYIKQVSGLLKIGVTSMCNNGSPSYEAVQE 1128

Query: 17   KYCCL 3
             Y CL
Sbjct: 1129 TYSCL 1133


>ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242393 [Vitis vinifera]
          Length = 1400

 Score =  296 bits (759), Expect = 4e-78
 Identities = 165/305 (54%), Positives = 201/305 (65%), Gaps = 2/305 (0%)
 Frame = -1

Query: 911  KDCFVRNLQNQKLS-DDDVRSAPPICSSGLEANEGAGQHLTSRTQGNPCXXXXXXXXXXX 735
            +D + R +Q  KLS DDD+ SAPP   S LE N+   Q   S    N             
Sbjct: 386  QDVYARGMQ--KLSGDDDIPSAPPFVGSSLEINQDRDQISGSTVTINE------------ 431

Query: 734  XXXXSENIASANGAQCNSGERIPDQSGRTSGGVDAPVSVSSFPALLPTFHASAQGPWCAV 555
                ++NI S+  AQ NSG RIPD S   +   +   S  S PA LPTFHAS QGPWCAV
Sbjct: 432  -PNTTKNIPSSTTAQENSGNRIPDPSASIA---ETTASSGSLPARLPTFHASGQGPWCAV 487

Query: 554  ISYDACVRLCLNLWARGCAEAPIFLENECELLRNAFGLQKVLLQSEEEILAKRSSELISE 375
            ISYDACVRLCL+ WA GC EAP+FL+NEC LLRNAFGL++VLLQSEEE+LA+RSS+++SE
Sbjct: 488  ISYDACVRLCLHSWAGGCMEAPLFLDNECALLRNAFGLEQVLLQSEEELLARRSSDIVSE 547

Query: 374  GTVLKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRTDALRHHXXXXXXXXXSGC 195
            G   KPKKIIGK+KVQ RK+KMA DPPT C+F SLK P I  ++             SG 
Sbjct: 548  GVAPKPKKIIGKMKVQTRKVKMARDPPTGCSFTSLKQPKINMESFWFRCSKLKSTLHSGW 607

Query: 194  NSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKVGVTTL-RSGSSSYEVVQE 18
             ++  V  APR+   GSFS  SLAY++AST+Y+KQVSGLLK+GVT++  +GS SYE VQE
Sbjct: 608  VAVRKVNFAPRIPVNGSFSSRSLAYMHASTRYIKQVSGLLKIGVTSMCNNGSPSYEAVQE 667

Query: 17   KYCCL 3
             Y CL
Sbjct: 668  TYSCL 672


>ref|XP_002514019.1| conserved hypothetical protein [Ricinus communis]
            gi|223547105|gb|EEF48602.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1219

 Score =  291 bits (744), Expect = 2e-76
 Identities = 165/326 (50%), Positives = 200/326 (61%), Gaps = 4/326 (1%)
 Frame = -1

Query: 968  SDGYSSGVPSRVN-VDNPAGKDCFVRNLQNQKLS-DDDVRSAPPICSSGLEANEGAGQHL 795
            S GY+S V S  N  +  + K+   RN+QN K S DDDV SAPP C SG E  E      
Sbjct: 201  SQGYASSVSSLANDAETISRKNLHSRNIQNDKFSHDDDVPSAPPFCGSGQEIKESI---- 256

Query: 794  TSRTQGNPCXXXXXXXXXXXXXXXSENIASANGAQCNSGERIPDQSGRTSGGVDAPVSVS 615
                                     E     +   C     I D  G T+   +A VS  
Sbjct: 257  -------------------------ELACGVHKTTC-----IADSCGLTTTRAEAAVSSG 286

Query: 614  SFPALLPTFHASAQGPWCAVISYDACVRLCLNLWARGCAEAPIFLENECELLRNAFGLQK 435
              PA LPTFHASA GPW AVI+YD CVRLCL+ WARGC EAP+FLENEC LLR+AF +Q 
Sbjct: 287  PNPAKLPTFHASALGPWHAVIAYDGCVRLCLHAWARGCMEAPMFLENECALLRDAFCVQN 346

Query: 434  VLLQSEEEILAKRSSELISEGTVLKPKKIIGKVKVQVRKIKMALDPPTSCNF--LSLKLP 261
            VLLQSEEE++AKRSSELI+EG   KPKKI+GK+KVQVRK+K  LDPPT C+   L+L+ P
Sbjct: 347  VLLQSEEELMAKRSSELITEGAAPKPKKIVGKLKVQVRKVKTVLDPPTGCSMSSLTLRAP 406

Query: 260  TIRTDALRHHXXXXXXXXXSGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSG 81
             ++ + +R+          +   +   +RVAPR+   GS SR SLAYV+ASTQY+KQVSG
Sbjct: 407  KLKLETVRYRFSKFHSTICTAWQAFRKIRVAPRVPANGSLSRQSLAYVHASTQYIKQVSG 466

Query: 80   LLKVGVTTLRSGSSSYEVVQEKYCCL 3
            LLK GV +LR+ SSSYEVVQE Y CL
Sbjct: 467  LLKTGVISLRNSSSSYEVVQETYSCL 492


Top