BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009635
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote...   585   e-164
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu...   578   e-162
ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|2...   564   e-158
ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol...   555   e-155

>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1
            [Vitis vinifera] gi|359480890|ref|XP_003632540.1|
            PREDICTED: uncharacterized RNA-binding protein
            C660.15-like isoform 2 [Vitis vinifera]
            gi|296082418|emb|CBI21423.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  585 bits (1507), Expect = e-164
 Identities = 290/357 (81%), Positives = 317/357 (88%), Gaps = 2/357 (0%)
 Frame = +2

Query: 143  MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322
            MDNKLVVLGIPWDVDT+GLR+YMSKFG+L DVIVMKER+TGRSRGFGY TF S EDAKK 
Sbjct: 1    MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60

Query: 323  LTAEHFLGSRMLEVKIATPKEEM-RAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 499
            L++EHFLG+RMLEVK+ATPKEEM RAP KK+TRIFVARIP SV EAAFRSYFETYG+ITD
Sbjct: 61   LSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITD 120

Query: 500  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 679
            LYMPKD  +KGHRGIGFITF S++SVD+LM ETHEL GS +VVDRATPK+E+ RP SRV 
Sbjct: 121  LYMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVP 180

Query: 680  HGGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 859
             GGYGAYNAY+TAATRYAALGAPTLYDHP + YGRG  E  R +GKKIFVGRLPQEASA+
Sbjct: 181  QGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRG--ESTRAMGKKIFVGRLPQEASAE 238

Query: 860  DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1039
            DLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICGQQVAIDSA
Sbjct: 239  DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 298

Query: 1040 APLDDAGPSGGYMM-NPEPFGGYGGPMRSSYSRMYGSLDFDDWGYGSAGPSRPSRMD 1207
             PLDDAG SG +MM + EPFGG+GGPMR +Y RMYGSLDFDDWGYG  G  RPSR D
Sbjct: 299  TPLDDAGSSGNFMMDSAEPFGGFGGPMR-TYGRMYGSLDFDDWGYGIGG-GRPSRAD 353


>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
            gi|223537154|gb|EEF38787.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 359

 Score =  578 bits (1490), Expect = e-162
 Identities = 282/357 (78%), Positives = 317/357 (88%), Gaps = 2/357 (0%)
 Frame = +2

Query: 143  MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322
            MD KLVVLGIPW+VDTEGLREYM+KFG+LDD IVMKER++GRSRGFGY TFAS EDAK A
Sbjct: 1    MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSA 60

Query: 323  LTAEHFLGSRMLEVKIATPK-EEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 499
            L++EHFLG+RMLEVK+ATPK EEMRAPAKK+TRIFVARIPPSVTE  FRS+FE YG+I D
Sbjct: 61   LSSEHFLGNRMLEVKVATPKQEEMRAPAKKVTRIFVARIPPSVTETTFRSHFEKYGEIID 120

Query: 500  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 679
            LYMPKD S+K HRGIGFITF S+DSVDSLM++THEL GST+VVDRATPK++D RP  R++
Sbjct: 121  LYMPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMA 180

Query: 680  HGGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 859
            HGGYGAYNAY++AATRYAALGAPTLYDHP   YG G  EP RG+GKKIFVGRLPQEA+ +
Sbjct: 181  HGGYGAYNAYISAATRYAALGAPTLYDHPGPMYGTG--EPARGVGKKIFVGRLPQEATPE 238

Query: 860  DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1039
            DLRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF E+GVA+RVSRRSHEICG QVAIDSA
Sbjct: 239  DLRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSA 298

Query: 1040 APLDDAGPSGGYMMNPEP-FGGYGGPMRSSYSRMYGSLDFDDWGYGSAGPSRPSRMD 1207
             P+DDAGPSG +MMN  P FGGYGGP+R ++ RMYGSLD+DDWGYG  G +RPSR D
Sbjct: 299  TPIDDAGPSGNFMMNAAPSFGGYGGPLR-NFGRMYGSLDYDDWGYG-MGSARPSRAD 353


>ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|222856715|gb|EEE94262.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  564 bits (1454), Expect = e-158
 Identities = 276/365 (75%), Positives = 311/365 (85%), Gaps = 10/365 (2%)
 Frame = +2

Query: 143  MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322
            M  KLV+LGIPW++DTEGLR+YMSKFG+L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 323  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502
            L+ EHFLG RMLE+K+ATPKEEMRAP KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSGEHFLGKRMLEIKVATPKEEMRAPTKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 503  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682
            YMPKD S+K HRGIGFIT+ S+DSVDSLM+ETHEL GST+VVDRATPK++D RP +R + 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAP 180

Query: 683  GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 862
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEAS +D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASTED 238

Query: 863  LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1042
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 1043 PLDDAGPSGGYMMN-PEPFGGYGGPMRSSYSRMYGSLDFDD---------WGYGSAGPSR 1192
            P+DDAGPSG +MM+ PEPFGGYGGPMR ++ RMYG+LD+DD         WGYG  G +R
Sbjct: 299  PIDDAGPSGNFMMSAPEPFGGYGGPMR-NFGRMYGTLDYDDAGAYMVPSKWGYG-MGSAR 356

Query: 1193 PSRMD 1207
            PSR D
Sbjct: 357  PSRAD 361


>ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|222853041|gb|EEE90588.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  563 bits (1451), Expect = e-158
 Identities = 277/365 (75%), Positives = 312/365 (85%), Gaps = 10/365 (2%)
 Frame = +2

Query: 143  MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322
            MD KLVVLGIPW++DTEGLREYM+KFG L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 323  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502
            L++EHFLG RMLEVK+ATPKEEMRAP+KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSSEHFLGKRMLEVKVATPKEEMRAPSKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 503  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682
            YMPKD S+K HRGIGFIT+ S+DSVD+LM+ETHEL GST+VVDRATPK++D RP  R++ 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAP 180

Query: 683  GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 862
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEASA+D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASAED 238

Query: 863  LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1042
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 1043 PLDDAGPSGGYMMN-PEPFGGYGGPMRSSYSRMYGSLDFDD---------WGYGSAGPSR 1192
            P+DDAGPSG +MM+ PEPFG Y GPMR ++ RMYG+LD+DD         WGYG  G +R
Sbjct: 299  PIDDAGPSGNFMMSGPEPFGSYAGPMR-NFGRMYGTLDYDDASAYMVPSKWGYG-MGSAR 356

Query: 1193 PSRMD 1207
            PSR D
Sbjct: 357  PSRAD 361


>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
            RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus]
          Length = 377

 Score =  555 bits (1429), Expect = e-155
 Identities = 281/373 (75%), Positives = 314/373 (84%), Gaps = 18/373 (4%)
 Frame = +2

Query: 143  MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322
            MD KLVVLGIPWDVDTEGLREYMSKFG+L+D IVMKER+TGRSRGFGY TFA+ EDAK A
Sbjct: 1    MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 323  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502
            L++EHFLG+RM+EVK+ATPKEEMRAP K++TRIFVARI  +VTEAAFRS+FE YG+ITDL
Sbjct: 61   LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 503  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682
            YMPKDQ +K HRGIGFITF SSDSV++LM++THEL GS +VVDRATPKD+D RP  ++  
Sbjct: 121  YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180

Query: 683  ------GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGR---GLPEPVRGLGKKIFVGR 835
                  GGYGAYNAY++AATRYAALGAPTLYDHP + YG     +P   RG+GKKIFVGR
Sbjct: 181  GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGR 240

Query: 836  LPQEASADDLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICG 1015
            LPQEASADDLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICG
Sbjct: 241  LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 300

Query: 1016 QQVAIDSAAPLDDA-------GPSGGYMMN--PEPFGGYGGPMRSSYSRMYGSLDFDDWG 1168
            QQVAIDSA PLDDA       G SG +MMN   + FGGY GPMR +Y RMYGSLDFDDWG
Sbjct: 301  QQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMR-TYGRMYGSLDFDDWG 359

Query: 1169 YGSAGPSRPSRMD 1207
            YG  G  RPSR D
Sbjct: 360  YGIGG-GRPSRAD 371