BLASTX nr result
ID: Coptis21_contig00009635
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009635 (1499 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote... 585 e-164 ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu... 578 e-162 ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|2... 564 e-158 ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|2... 563 e-158 ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol... 555 e-155 >ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1 [Vitis vinifera] gi|359480890|ref|XP_003632540.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 2 [Vitis vinifera] gi|296082418|emb|CBI21423.3| unnamed protein product [Vitis vinifera] Length = 359 Score = 585 bits (1507), Expect = e-164 Identities = 290/357 (81%), Positives = 317/357 (88%), Gaps = 2/357 (0%) Frame = +2 Query: 143 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322 MDNKLVVLGIPWDVDT+GLR+YMSKFG+L DVIVMKER+TGRSRGFGY TF S EDAKK Sbjct: 1 MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60 Query: 323 LTAEHFLGSRMLEVKIATPKEEM-RAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 499 L++EHFLG+RMLEVK+ATPKEEM RAP KK+TRIFVARIP SV EAAFRSYFETYG+ITD Sbjct: 61 LSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITD 120 Query: 500 LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 679 LYMPKD +KGHRGIGFITF S++SVD+LM ETHEL GS +VVDRATPK+E+ RP SRV Sbjct: 121 LYMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVP 180 Query: 680 HGGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 859 GGYGAYNAY+TAATRYAALGAPTLYDHP + YGRG E R +GKKIFVGRLPQEASA+ Sbjct: 181 QGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRG--ESTRAMGKKIFVGRLPQEASAE 238 Query: 860 DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1039 DLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICGQQVAIDSA Sbjct: 239 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 298 Query: 1040 APLDDAGPSGGYMM-NPEPFGGYGGPMRSSYSRMYGSLDFDDWGYGSAGPSRPSRMD 1207 PLDDAG SG +MM + EPFGG+GGPMR +Y RMYGSLDFDDWGYG G RPSR D Sbjct: 299 TPLDDAGSSGNFMMDSAEPFGGFGGPMR-TYGRMYGSLDFDDWGYGIGG-GRPSRAD 353 >ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis] gi|223537154|gb|EEF38787.1| RNA-binding protein, putative [Ricinus communis] Length = 359 Score = 578 bits (1490), Expect = e-162 Identities = 282/357 (78%), Positives = 317/357 (88%), Gaps = 2/357 (0%) Frame = +2 Query: 143 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322 MD KLVVLGIPW+VDTEGLREYM+KFG+LDD IVMKER++GRSRGFGY TFAS EDAK A Sbjct: 1 MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSA 60 Query: 323 LTAEHFLGSRMLEVKIATPK-EEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 499 L++EHFLG+RMLEVK+ATPK EEMRAPAKK+TRIFVARIPPSVTE FRS+FE YG+I D Sbjct: 61 LSSEHFLGNRMLEVKVATPKQEEMRAPAKKVTRIFVARIPPSVTETTFRSHFEKYGEIID 120 Query: 500 LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 679 LYMPKD S+K HRGIGFITF S+DSVDSLM++THEL GST+VVDRATPK++D RP R++ Sbjct: 121 LYMPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMA 180 Query: 680 HGGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 859 HGGYGAYNAY++AATRYAALGAPTLYDHP YG G EP RG+GKKIFVGRLPQEA+ + Sbjct: 181 HGGYGAYNAYISAATRYAALGAPTLYDHPGPMYGTG--EPARGVGKKIFVGRLPQEATPE 238 Query: 860 DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1039 DLRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF E+GVA+RVSRRSHEICG QVAIDSA Sbjct: 239 DLRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSA 298 Query: 1040 APLDDAGPSGGYMMNPEP-FGGYGGPMRSSYSRMYGSLDFDDWGYGSAGPSRPSRMD 1207 P+DDAGPSG +MMN P FGGYGGP+R ++ RMYGSLD+DDWGYG G +RPSR D Sbjct: 299 TPIDDAGPSGNFMMNAAPSFGGYGGPLR-NFGRMYGSLDYDDWGYG-MGSARPSRAD 353 >ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|222856715|gb|EEE94262.1| predicted protein [Populus trichocarpa] Length = 367 Score = 564 bits (1454), Expect = e-158 Identities = 276/365 (75%), Positives = 311/365 (85%), Gaps = 10/365 (2%) Frame = +2 Query: 143 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322 M KLV+LGIPW++DTEGLR+YMSKFG+L+D IVMKER++GRSRGFGY TF S EDAK Sbjct: 1 MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60 Query: 323 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502 L+ EHFLG RMLE+K+ATPKEEMRAP KK TRIFVARIPPSVTE FRS+FE YG+I DL Sbjct: 61 LSGEHFLGKRMLEIKVATPKEEMRAPTKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120 Query: 503 YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682 YMPKD S+K HRGIGFIT+ S+DSVDSLM+ETHEL GST+VVDRATPK++D RP +R + Sbjct: 121 YMPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAP 180 Query: 683 GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 862 GGYGAYNAY++AATRYAALGAPTLYDHP YGRG E RG+GKKIFVGRLPQEAS +D Sbjct: 181 GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASTED 238 Query: 863 LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1042 LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA Sbjct: 239 LRQYFGRFGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298 Query: 1043 PLDDAGPSGGYMMN-PEPFGGYGGPMRSSYSRMYGSLDFDD---------WGYGSAGPSR 1192 P+DDAGPSG +MM+ PEPFGGYGGPMR ++ RMYG+LD+DD WGYG G +R Sbjct: 299 PIDDAGPSGNFMMSAPEPFGGYGGPMR-NFGRMYGTLDYDDAGAYMVPSKWGYG-MGSAR 356 Query: 1193 PSRMD 1207 PSR D Sbjct: 357 PSRAD 361 >ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|222853041|gb|EEE90588.1| predicted protein [Populus trichocarpa] Length = 367 Score = 563 bits (1451), Expect = e-158 Identities = 277/365 (75%), Positives = 312/365 (85%), Gaps = 10/365 (2%) Frame = +2 Query: 143 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322 MD KLVVLGIPW++DTEGLREYM+KFG L+D IVMKER++GRSRGFGY TF S EDAK Sbjct: 1 MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60 Query: 323 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502 L++EHFLG RMLEVK+ATPKEEMRAP+KK TRIFVARIPPSVTE FRS+FE YG+I DL Sbjct: 61 LSSEHFLGKRMLEVKVATPKEEMRAPSKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120 Query: 503 YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682 YMPKD S+K HRGIGFIT+ S+DSVD+LM+ETHEL GST+VVDRATPK++D RP R++ Sbjct: 121 YMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAP 180 Query: 683 GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 862 GGYGAYNAY++AATRYAALGAPTLYDHP YGRG E RG+GKKIFVGRLPQEASA+D Sbjct: 181 GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASAED 238 Query: 863 LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1042 LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA Sbjct: 239 LRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298 Query: 1043 PLDDAGPSGGYMMN-PEPFGGYGGPMRSSYSRMYGSLDFDD---------WGYGSAGPSR 1192 P+DDAGPSG +MM+ PEPFG Y GPMR ++ RMYG+LD+DD WGYG G +R Sbjct: 299 PIDDAGPSGNFMMSGPEPFGSYAGPMR-NFGRMYGTLDYDDASAYMVPSKWGYG-MGSAR 356 Query: 1193 PSRMD 1207 PSR D Sbjct: 357 PSRAD 361 >ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis sativus] gi|449502733|ref|XP_004161727.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis sativus] Length = 377 Score = 555 bits (1429), Expect = e-155 Identities = 281/373 (75%), Positives = 314/373 (84%), Gaps = 18/373 (4%) Frame = +2 Query: 143 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 322 MD KLVVLGIPWDVDTEGLREYMSKFG+L+D IVMKER+TGRSRGFGY TFA+ EDAK A Sbjct: 1 MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60 Query: 323 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 502 L++EHFLG+RM+EVK+ATPKEEMRAP K++TRIFVARI +VTEAAFRS+FE YG+ITDL Sbjct: 61 LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120 Query: 503 YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 682 YMPKDQ +K HRGIGFITF SSDSV++LM++THEL GS +VVDRATPKD+D RP ++ Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180 Query: 683 ------GGYGAYNAYMTAATRYAALGAPTLYDHPAAAYGR---GLPEPVRGLGKKIFVGR 835 GGYGAYNAY++AATRYAALGAPTLYDHP + YG +P RG+GKKIFVGR Sbjct: 181 GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGR 240 Query: 836 LPQEASADDLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICG 1015 LPQEASADDLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICG Sbjct: 241 LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 300 Query: 1016 QQVAIDSAAPLDDA-------GPSGGYMMN--PEPFGGYGGPMRSSYSRMYGSLDFDDWG 1168 QQVAIDSA PLDDA G SG +MMN + FGGY GPMR +Y RMYGSLDFDDWG Sbjct: 301 QQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMR-TYGRMYGSLDFDDWG 359 Query: 1169 YGSAGPSRPSRMD 1207 YG G RPSR D Sbjct: 360 YGIGG-GRPSRAD 371