BLASTX nr result

ID: Coptis21_contig00009633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009633
         (1840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v...   558   e-156
ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase...   548   e-153
ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatul...   548   e-153
gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasili...   547   e-153
gb|ABK95889.1| unknown [Populus trichocarpa]                          536   e-150

>ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera]
            gi|297742018|emb|CBI33805.3| unnamed protein product
            [Vitis vinifera]
          Length = 508

 Score =  558 bits (1438), Expect = e-156
 Identities = 297/494 (60%), Positives = 340/494 (68%)
 Frame = +2

Query: 110  IIASAPGKVLMTGGYLILERPNAGLVLSTNARFYAILKPIYNHLKPDSWAWGWTDVKLTS 289
            ++ASAPGKVLMTGGYLILERPNAG+VLSTNARFYAI+KP+   ++PDSWAW WTDVKLTS
Sbjct: 3    VVASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPLREDIEPDSWAWAWTDVKLTS 62

Query: 290  PQLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 469
            PQLSRET+YK+SLKNL LQC+SS E  NPFVE                            
Sbjct: 63   PQLSRETMYKMSLKNLMLQCVSSSESRNPFVEQAVQYTIAAARATLDKNNNDFLHTKLLQ 122

Query: 470  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEVSTGNNCKPEVAKT 649
                 TILG NDFYSYRN IEA GLPLT + LA+LP F+ ITFNAE S G NCKPEVAKT
Sbjct: 123  GLDI-TILGCNDFYSYRNYIEARGLPLTPDVLAALPPFTPITFNAEESNGENCKPEVAKT 181

Query: 650  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 829
            GLG               Y GVVNLS   +  +QEKD  +LDLVHV+AQSAHCIAQGK+G
Sbjct: 182  GLGSSAAMTTSVVAALLHYFGVVNLSSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVG 241

Query: 830  SGFDVSAAVYGSQRYVRFSPGVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1009
            SGFDVS+AVYGSQRYVRFSP VLSSAQVA+K   +QEVI D+LK  WDHE+TKF      
Sbjct: 242  SGFDVSSAVYGSQRYVRFSPEVLSSAQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLM 301

Query: 1010 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQ 1189
                            MVGAVKKWQ S+P+KS+E WR LS ANSALETQ K+L K AEE 
Sbjct: 302  TLLLGEPGAGGSSTPSMVGAVKKWQKSDPEKSLETWRKLSAANSALETQFKILSKLAEEN 361

Query: 1190 WESYEHVICSCSGLRCEQWKEQATDLFQEAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1369
            W++Y+ VI SCS  R E+W E+AT   QEA+V ALL ARDA+ +IR +MR MG+ AG+PI
Sbjct: 362  WDAYKCVINSCSIHRSEKWMERATGPDQEAVVNALLAARDAMLRIRSNMRQMGEAAGIPI 421

Query: 1370 EPESQTQLLDATMNMEXXXXXXXXXXXXFDAVFAVTLGEXXXXXXXXXXXLGVLAMLVTE 1549
            EP SQT+LLDATM+ME            FDA+FAVTLG+           L VLAMLV E
Sbjct: 422  EPNSQTRLLDATMDMEGVLLAGVPGAGGFDAIFAVTLGDSSSNITKAWTSLNVLAMLVRE 481

Query: 1550 DPRGVSIETDDPRA 1591
            DP GVS+ET DPRA
Sbjct: 482  DPHGVSLETGDPRA 495


>ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase-like [Cucumis sativus]
            gi|449508038|ref|XP_004163199.1| PREDICTED: probable
            phosphomevalonate kinase-like [Cucumis sativus]
          Length = 507

 Score =  548 bits (1412), Expect = e-153
 Identities = 287/493 (58%), Positives = 337/493 (68%)
 Frame = +2

Query: 110  IIASAPGKVLMTGGYLILERPNAGLVLSTNARFYAILKPIYNHLKPDSWAWGWTDVKLTS 289
            ++ASAPGKVLMTGGYL+LE+PNAGLVLSTNARFYAI+KPIY  +KPDSWAW WTD+KLTS
Sbjct: 3    VVASAPGKVLMTGGYLVLEKPNAGLVLSTNARFYAIVKPIYEEIKPDSWAWSWTDIKLTS 62

Query: 290  PQLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 469
            PQL RE++YKLSLKN +L+ +S  +  NPFVE                            
Sbjct: 63   PQLLRESIYKLSLKNQSLESVSPSQSRNPFVERAVEYCVAAASAKFVDKDNKNALHKLLL 122

Query: 470  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEVSTGNNCKPEVAKT 649
                 TILG N+FYSYR+QIEA GLPLT+ESLASLP FSSITFN E S G NCKPEVAKT
Sbjct: 123  QGLDITILGCNEFYSYRSQIEARGLPLTSESLASLPPFSSITFNDEESLGKNCKPEVAKT 182

Query: 650  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 829
            GLG               YLGVVNLS  T    +++  A LDLVH++AQSAHCIAQGK+G
Sbjct: 183  GLGSSAAMTAAVVAALLNYLGVVNLSLLTGD-QEQRGSAGLDLVHIIAQSAHCIAQGKVG 241

Query: 830  SGFDVSAAVYGSQRYVRFSPGVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1009
            SGFDVS+AVYGSQRYVRFSP VLSSAQ A     ++EVI D+L  KWDHE+TKF      
Sbjct: 242  SGFDVSSAVYGSQRYVRFSPEVLSSAQAAKNGIPIEEVIVDILNQKWDHERTKFSLPPLM 301

Query: 1010 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQ 1189
                            MVGAVKKWQ S+PQKS++ WR LSE NS LETQL  L K A E 
Sbjct: 302  TLVLGEPGVGGSSTPSMVGAVKKWQKSDPQKSLDTWRKLSEGNSELETQLNTLHKLAAEH 361

Query: 1190 WESYEHVICSCSGLRCEQWKEQATDLFQEAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1369
            W++Y+++I SC  L  E+W  QAT+  Q+AI+KALLGAR+A+ QIR HMR MG+ AGVPI
Sbjct: 362  WDAYKYIINSCCKLTSEKWIHQATEPSQQAIIKALLGARNAMLQIRHHMRSMGEAAGVPI 421

Query: 1370 EPESQTQLLDATMNMEXXXXXXXXXXXXFDAVFAVTLGEXXXXXXXXXXXLGVLAMLVTE 1549
            EP+SQT+LLDATMNME            FDAVFAVTLG+           L +LA+LV E
Sbjct: 422  EPDSQTKLLDATMNMEGVLLAGVPGAGGFDAVFAVTLGDSTSNVTKSWSSLDILALLVRE 481

Query: 1550 DPRGVSIETDDPR 1588
            DPRGV++E+ DPR
Sbjct: 482  DPRGVALESCDPR 494


>ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatula]
            gi|355491268|gb|AES72471.1| Phosphomevalonate kinase
            [Medicago truncatula]
          Length = 508

 Score =  548 bits (1412), Expect = e-153
 Identities = 289/496 (58%), Positives = 346/496 (69%)
 Frame = +2

Query: 101  MAVIIASAPGKVLMTGGYLILERPNAGLVLSTNARFYAILKPIYNHLKPDSWAWGWTDVK 280
            MAV++ASAPGKVLMTGGYL+LERPNAGLVLSTNARFYAI+KPIY   KPDSWAW W+DV+
Sbjct: 1    MAVVVASAPGKVLMTGGYLVLERPNAGLVLSTNARFYAIVKPIYPQTKPDSWAWAWSDVR 60

Query: 281  LTSPQLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXX 460
            LTSPQLSRE  YKL+LKNLT+Q +SS E  NPFVE          +              
Sbjct: 61   LTSPQLSREAFYKLALKNLTIQTVSSSETRNPFVEYAVQYSVAAAYATADQNKKDLLHKL 120

Query: 461  XXXXXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEVSTGNNCKPEV 640
                    TILGSNDFYSYRN+IE  GLPLT+ESLA+LP F+SI+FN + + G NCKPEV
Sbjct: 121  LLQGLDI-TILGSNDFYSYRNEIERHGLPLTSESLATLPPFASISFNTDDANGGNCKPEV 179

Query: 641  AKTGLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQG 820
            AKTGLG               YLGVV +S S++   + KD A+LD+VH +AQ+AHCIAQG
Sbjct: 180  AKTGLGSSAAMTTAVVAALLHYLGVVKIS-SSKDRQERKDIADLDMVHKIAQTAHCIAQG 238

Query: 821  KIGSGFDVSAAVYGSQRYVRFSPGVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXX 1000
            K+GSGFDVS+AVYGS RYVRFSP V+SS QVA     L EVISD+LK  WDH++T+F   
Sbjct: 239  KVGSGFDVSSAVYGSHRYVRFSPEVISSTQVAATVVPLPEVISDILKGNWDHDRTEFSLP 298

Query: 1001 XXXXXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFA 1180
                               MVG+VKKWQ S+PQKS+E WR LSEANSALE QL LL K A
Sbjct: 299  PLMTLVLGEPGTGGSSTPSMVGSVKKWQKSDPQKSLETWRRLSEANSALEIQLNLLRKLA 358

Query: 1181 EEQWESYEHVICSCSGLRCEQWKEQATDLFQEAIVKALLGARDAVFQIRFHMRLMGKEAG 1360
            +EQW++Y+ VI +CS LR ++W EQA+D  +EA++KALLG+++A+  IR+HMRLMG+ AG
Sbjct: 359  KEQWDAYKSVIDNCSILRSDKWIEQASDSNKEAVIKALLGSKEAMVGIRYHMRLMGEAAG 418

Query: 1361 VPIEPESQTQLLDATMNMEXXXXXXXXXXXXFDAVFAVTLGEXXXXXXXXXXXLGVLAML 1540
            VPIEPESQT LLDATMN+E            +DAVFAVTLG+           L VLAML
Sbjct: 419  VPIEPESQTHLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSNSNVTKTWSSLNVLAML 478

Query: 1541 VTEDPRGVSIETDDPR 1588
            V EDP GVS+E+ DPR
Sbjct: 479  VKEDPCGVSLESADPR 494


>gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  547 bits (1409), Expect = e-153
 Identities = 292/493 (59%), Positives = 342/493 (69%)
 Frame = +2

Query: 110  IIASAPGKVLMTGGYLILERPNAGLVLSTNARFYAILKPIYNHLKPDSWAWGWTDVKLTS 289
            ++ASAPGKVLMTGGYLILERPNAG+VLSTNARFYAI+KPIY+ +KPDSWAW WTDVKLTS
Sbjct: 3    VVASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPIYDEIKPDSWAWAWTDVKLTS 62

Query: 290  PQLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 469
            PQL+RE++YKLSLKNL LQC+SS    NPFVE          H                 
Sbjct: 63   PQLARESLYKLSLKNLALQCVSSSASRNPFVEQAVQFAVAAAHATLDKDKKNVLNKLLLQ 122

Query: 470  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEVSTGNNCKPEVAKT 649
                 TILG+NDFYSYRN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKT
Sbjct: 123  GLDI-TILGTNDFYSYRNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKT 181

Query: 650  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 829
            GLG               +LG+V+LS S +    EK  ++LDLVH++AQ+AHCIAQGK+G
Sbjct: 182  GLGSSAAMTTAVVAALLHHLGLVDLSSSCK----EKKFSDLDLVHIIAQTAHCIAQGKVG 237

Query: 830  SGFDVSAAVYGSQRYVRFSPGVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1009
            SGFDVS+AVYGS RYVRFSP VLSSAQ A K   LQEVIS++LK KWDHE+T F      
Sbjct: 238  SGFDVSSAVYGSHRYVRFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLM 297

Query: 1010 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQ 1189
                            MVGA+KKWQ S+ QKS E WR LSEANSALETQ  +L K AEE 
Sbjct: 298  SLLLGEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEH 357

Query: 1190 WESYEHVICSCSGLRCEQWKEQATDLFQEAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1369
            W++Y+ VI SCS    E+W EQAT+  +EA+VKALLG+R+A+ QIR +MR MG+ AGVPI
Sbjct: 358  WDAYKCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPI 417

Query: 1370 EPESQTQLLDATMNMEXXXXXXXXXXXXFDAVFAVTLGEXXXXXXXXXXXLGVLAMLVTE 1549
            EPESQT+LLD TMNM+            FDAVFAVTLG+           L VLA+LV E
Sbjct: 418  EPESQTRLLDTTMNMDGVLLAGVPGAGGFDAVFAVTLGDSGTNVAKAWSSLNVLALLVRE 477

Query: 1550 DPRGVSIETDDPR 1588
            DP GV +E+ DPR
Sbjct: 478  DPNGVLLESGDPR 490


>gb|ABK95889.1| unknown [Populus trichocarpa]
          Length = 503

 Score =  536 bits (1382), Expect = e-150
 Identities = 286/493 (58%), Positives = 339/493 (68%)
 Frame = +2

Query: 110  IIASAPGKVLMTGGYLILERPNAGLVLSTNARFYAILKPIYNHLKPDSWAWGWTDVKLTS 289
            ++ASAPGKVLMTGGYLILERPNAG+VLSTNARFYAI+KP+Y+ +KPDSWA  WTDVKLTS
Sbjct: 3    VVASAPGKVLMTGGYLILERPNAGVVLSTNARFYAIVKPLYDEIKPDSWASAWTDVKLTS 62

Query: 290  PQLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 469
            PQLSRE++YKLSLKNL LQC+SS E  NPFVE          HV                
Sbjct: 63   PQLSRESIYKLSLKNLMLQCVSSSESRNPFVEQAVQYAVAAAHVTFDKDKKDALNKILLQ 122

Query: 470  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEVSTGNNCKPEVAKT 649
                  ILG NDFYSYRNQIEA GLPLT E+LA+LP F+SI+FNAE   G NCKPEVAKT
Sbjct: 123  GLHIM-ILGCNDFYSYRNQIEARGLPLTPEALAALPPFTSISFNAE-ENGQNCKPEVAKT 180

Query: 650  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 829
            GLG               YLGVV+LS    +L++++   ++D+VH++AQ+AHCIAQGK+G
Sbjct: 181  GLGSSAAMTTAVVAALLHYLGVVDLS----SLSKDEGPVDVDMVHIIAQTAHCIAQGKVG 236

Query: 830  SGFDVSAAVYGSQRYVRFSPGVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1009
            SGFDVS+AVYGS RYVRFSP +LSSAQ A+K   LQEV++ +LK KWDHE+TKF      
Sbjct: 237  SGFDVSSAVYGSHRYVRFSPDILSSAQDAVKEIPLQEVMASILKGKWDHERTKFSLPPLM 296

Query: 1010 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQ 1189
                            MVG+VK+WQ S+P K+ E WR LSEANSALE QL +L K AEE 
Sbjct: 297  NLLLGEPGTGGSSTPSMVGSVKRWQKSDPTKAEETWRKLSEANSALEIQLNILSKLAEEN 356

Query: 1190 WESYEHVICSCSGLRCEQWKEQATDLFQEAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1369
            W +Y+ VI  CS  R E+W EQAT+  QE + KALLGAR  +F+IR HMR MG+ AGVPI
Sbjct: 357  WNAYKCVIDICSKQRPEKWIEQATEPSQEVVFKALLGARSTMFEIRNHMRQMGEAAGVPI 416

Query: 1370 EPESQTQLLDATMNMEXXXXXXXXXXXXFDAVFAVTLGEXXXXXXXXXXXLGVLAMLVTE 1549
            EPESQ+QLLDATM ME            FDAVFA+TLG+           L V+A+LV E
Sbjct: 417  EPESQSQLLDATMGMEGVLLAGVPGAGGFDAVFAITLGDSGSNVTKAWSSLNVMALLVRE 476

Query: 1550 DPRGVSIETDDPR 1588
            DP GVS+ET DPR
Sbjct: 477  DPHGVSLETGDPR 489


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