BLASTX nr result

ID: Coptis21_contig00009632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009632
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   221   2e-55
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              220   3e-55
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   220   3e-55
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   219   9e-55

>ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|222832483|gb|EEE70960.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  224 bits (571), Expect = 2e-56
 Identities = 118/202 (58%), Positives = 142/202 (70%), Gaps = 11/202 (5%)
 Frame = +3

Query: 156 EKTGGKIIYSRGGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPRLIQQVPEGLTLEEAR 335
           E+TGGKIIY +GG L                  MLWKPVTPVYPRLIQ+ PEGLTL+EA 
Sbjct: 313 ERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEAS 372

Query: 336 EMRKRGRELQAICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDL 515
            MR +GR+L  ICKLGKNGVY  LV +V+EAFEECELVR++CQGMNGSD++KIGAKL+DL
Sbjct: 373 GMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDL 432

Query: 516 VPCVLVSFEFEHILMWRGRDWKSSFLKSKDDCMEDRESATDGA---------IANHT--V 662
           VPCVL+SFE EHILMWRGRDWKSSF K  +D  E + S+ DGA         + N T  V
Sbjct: 433 VPCVLISFECEHILMWRGRDWKSSFTKPVNDGDEAKNSSIDGATSATPLLEGLQNETFSV 492

Query: 663 ADSSIVANEETTELIAQDSLTD 728
            D+S + N +T+ + A+D   D
Sbjct: 493 KDASTL-NLKTSRMDAEDQGED 513


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
           CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus]
          Length = 745

 Score =  221 bits (563), Expect = 2e-55
 Identities = 119/218 (54%), Positives = 149/218 (68%), Gaps = 3/218 (1%)
 Frame = +3

Query: 156 EKTGGKIIYSRGGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPRLIQQVPEGLTLEEAR 335
           E+TGGKIIYSRGGAL                  MLWKP  PVYPRL++ +P+GLTLEE  
Sbjct: 317 ERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVT 376

Query: 336 EMRKRGRELQAICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDL 515
           EMRK+GR+L  ICKLGKNGVYS LV+HV+EAFEECELVR++CQG+NGSD++KIGAKLKDL
Sbjct: 377 EMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDL 436

Query: 516 VPCVLVSFEFEHILMWRGRDWKSSFLKSKDDCMEDRESATDGAIANHTVADSSIVANEET 695
           VPCVL+SFE EHIL+WRGRDWKSS        +   E   +GA A H   +++IVA    
Sbjct: 437 VPCVLISFESEHILLWRGRDWKSS--------LPYIERNPEGAKA-HGTDETTIVAPSIE 487

Query: 696 TELIAQDSLT--DDATLET-RNASRSSMYSEGVINRNL 800
            ++  +++LT  D   L T  N    SM +E  I+ ++
Sbjct: 488 QDVSVKNTLTSLDSEDLSTGGNEDPDSMIAEKSISADV 525


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  220 bits (561), Expect = 3e-55
 Identities = 120/236 (50%), Positives = 150/236 (63%), Gaps = 4/236 (1%)
 Frame = +3

Query: 156 EKTGGKIIYSRGGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPRLIQQVPEGLTLEEAR 335
           EKTGGK+IY +GG L                  MLWKPVTPVYPRL+Q+ PEGLTLEEA 
Sbjct: 309 EKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAG 368

Query: 336 EMRKRGRELQAICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDL 515
            MRK+GR+L  ICKL KNGVY+ LV +V+EAFEECELVR++CQG+N SDY+KIGAKLKDL
Sbjct: 369 AMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDL 428

Query: 516 VPCVLVSFEFEHILMWRGRDWKSSFLKSKDDCMEDRESATDGAIANHTVADSSIVANEET 695
           VPCVL+SFE EHILMWRG DWK    K +D C E +ES  +        +++SI    E 
Sbjct: 429 VPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNN--------SEASIPPPFEG 480

Query: 696 TELIAQDS---LTDDATLETRNASRSSMYSEGV-INRNLGLSSSEGEVQYFSATSK 851
            EL A  S      D +L+  +   S + +E V +++   LSS   ++  F    K
Sbjct: 481 QELSASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDK 536


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  220 bits (561), Expect = 3e-55
 Identities = 120/236 (50%), Positives = 150/236 (63%), Gaps = 4/236 (1%)
 Frame = +3

Query: 156 EKTGGKIIYSRGGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPRLIQQVPEGLTLEEAR 335
           EKTGGK+IY +GG L                  MLWKPVTPVYPRL+Q+ PEGLTLEEA 
Sbjct: 309 EKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAG 368

Query: 336 EMRKRGRELQAICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDL 515
            MRK+GR+L  ICKL KNGVY+ LV +V+EAFEECELVR++CQG+N SDY+KIGAKLKDL
Sbjct: 369 AMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDL 428

Query: 516 VPCVLVSFEFEHILMWRGRDWKSSFLKSKDDCMEDRESATDGAIANHTVADSSIVANEET 695
           VPCVL+SFE EHILMWRG DWK    K +D C E +ES  +        +++SI    E 
Sbjct: 429 VPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNN--------SEASIPPPFEG 480

Query: 696 TELIAQDS---LTDDATLETRNASRSSMYSEGV-INRNLGLSSSEGEVQYFSATSK 851
            EL A  S      D +L+  +   S + +E V +++   LSS   ++  F    K
Sbjct: 481 QELSASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDK 536


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
           gi|223524018|gb|EEF27274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 748

 Score =  219 bits (557), Expect = 9e-55
 Identities = 104/175 (59%), Positives = 130/175 (74%)
 Frame = +3

Query: 156 EKTGGKIIYSRGGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPRLIQQVPEGLTLEEAR 335
           E+TGGK+IY +GG +                  MLWKPVTPVYPRLI++ PEGLTLEEA 
Sbjct: 317 ERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEAS 376

Query: 336 EMRKRGRELQAICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDL 515
           EMR++GR+L  ICKL KNGVY  LV+ V+EAFEECELVR+DCQG+NGSDY+K+GAKLK+L
Sbjct: 377 EMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKEL 436

Query: 516 VPCVLVSFEFEHILMWRGRDWKSSFLKSKDDCMEDRESATDGAIANHTVADSSIV 680
           VPC+L+SFE EHILMWRGRDWKSS +K  +D +E   S  + A +  +V +  I+
Sbjct: 437 VPCLLISFEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIASVLEDQIM 491


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