BLASTX nr result

ID: Coptis21_contig00009623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009623
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]   276   8e-72
ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-57
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...   223   8e-56
ref|XP_003594803.1| hypothetical protein MTR_2g034810 [Medicago ...   217   4e-54
ref|XP_002271833.2| PREDICTED: uncharacterized protein LOC100256...   214   5e-53

>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score =  276 bits (706), Expect = 8e-72
 Identities = 168/377 (44%), Positives = 224/377 (59%), Gaps = 10/377 (2%)
 Frame = -2

Query: 1230 SLGLNVIGGDALNKLLEQKLRELTYGIESSSRNLIKPMEVATSASFWPELVSDLNAVSTT 1051
            SLG+NVIGGDAL+ LL+QKLRELT G++SS R   K    A+S S   +L   LNA+STT
Sbjct: 583  SLGINVIGGDALSMLLDQKLRELTXGVDSSRRESFKVGSTASS-SILQDLAPTLNALSTT 641

Query: 1050 PKDCDNRAKLGVHRDSI--VYDSNCFSTKA-------HRFQEAEEVDEHSIDSST-VRKD 901
             +  D R +  + +D +  +YDS+ FS  A       H+ Q   E+DE S  S+   R  
Sbjct: 642  HRLHDKRDQPWLQKDKMDSLYDSD-FSFTAPSAFDIKHKLQGENEMDECSSSSNAEARNL 700

Query: 900  SNCRQPSPVSILEPCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPKKFQXXXX 721
             +CR PSPVSILEP F                                 S  KKF     
Sbjct: 701  LDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQELISLSFSKKFNSMEA 760

Query: 720  XXXXXXXXXSTCTGYFSRECGTRFSMRNVRKTDKRELGYVREVVNNADLMFRDLALGRVH 541
                     ST T   + +     +   + ++ K EL YV+E++ N +LMF+D ALGR  
Sbjct: 761  DAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILCNIELMFKDFALGRAR 820

Query: 540  EMVNPHLFEKLENQKSWSRSASKEESNSRLRRRVLFDCVAECLDLRCKPYVGGSCRKWAK 361
            E++NPHLF +LEN+K        E   SRL R+VLFDCV+ECLDLRC+ YVGG C+ WAK
Sbjct: 821  EIINPHLFHQLENRKGGLEIDGDE---SRLNRKVLFDCVSECLDLRCRRYVGGGCKTWAK 877

Query: 360  GIAVVQQEGRLAEEIYKEISSFRSMGDWMLDSLVDKDMSTKHGKWLDFELEELEVGGEIS 181
            G+ +V+++  L+EE+YKEIS +RSMGD M+D LVDKDMS+++G+WLDFE+E  E+G EI 
Sbjct: 878  GVTMVRRKEWLSEEVYKEISGWRSMGDCMVDELVDKDMSSQYGRWLDFEVETFELGVEIE 937

Query: 180  RRILSSLVDEVVADILL 130
              + +SLVDE+VADILL
Sbjct: 938  SLLFTSLVDEIVADILL 954


>ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|222852164|gb|EEE89711.1|
            predicted protein [Populus trichocarpa]
          Length = 934

 Score =  228 bits (580), Expect = 3e-57
 Identities = 144/379 (37%), Positives = 209/379 (55%), Gaps = 10/379 (2%)
 Frame = -2

Query: 1239 KVPSLGLNVIGGDALNKLLEQKLRELTYGIESSSRNLIKPMEVATSASFWPELVSDLNAV 1060
            K+ S+G NVIGGDAL+ LLEQKLRELT G+ESSS                   +S  ++ 
Sbjct: 576  KLSSVGYNVIGGDALSSLLEQKLRELTKGVESSSS------------------ISTFSSG 617

Query: 1059 STTPKDCDNRAKLG--VHRDSIVYDSNC---FSTKA-----HRFQEAEEVDEHSIDSSTV 910
               P+  DN+ +    + +    YDS     F+  A     H FQ  +E+D  S  S+  
Sbjct: 618  GAAPRLHDNKDQSFSCIDKSDSCYDSPSALFFTDPAALRLKHTFQGVDEMDCSS-KSNDS 676

Query: 909  RKDSNCRQPSPVSILEPCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPKKFQX 730
            R+  +CR+PSPVS+LE  F                                 S  K+   
Sbjct: 677  RQLLDCRRPSPVSVLEHSFSTESSSSLDSMDSCSTEGNKHCSSIQTQEVLSLSSTKRVHF 736

Query: 729  XXXXXXXXXXXXSTCTGYFSRECGTRFSMRNVRKTDKRELGYVREVVNNADLMFRDLALG 550
                        ST TG  +R+     ++  + ++ K E+ YV +++ N + MF+DLALG
Sbjct: 737  VDADMELSDSASSTSTGTVARKHSIMLAVTGLVRSKKWEVQYVEKILCNIESMFQDLALG 796

Query: 549  RVHEMVNPHLFEKLENQKSWSRSASKEESNSRLRRRVLFDCVAECLDLRCKPYVGGSCRK 370
            R  E++NPHLF +LE +K    S   ++ ++RL R+VLFDC +ECLDLRC+ YVGG  + 
Sbjct: 797  RASEIINPHLFHQLERKKIMLES---DDVDARLERKVLFDCASECLDLRCRRYVGGGYKA 853

Query: 369  WAKGIAVVQQEGRLAEEIYKEISSFRSMGDWMLDSLVDKDMSTKHGKWLDFELEELEVGG 190
            W KG  +V+++  LAE++YKEIS +  MGD M+D LV+KDMS+++G+WLDFE++   +G 
Sbjct: 854  WVKGTTMVRRKEWLAEDMYKEISEWSRMGDCMVDELVEKDMSSQYGRWLDFEVDAYALGV 913

Query: 189  EISRRILSSLVDEVVADIL 133
            E   +I +SLV+EVVADIL
Sbjct: 914  EFESQIFNSLVNEVVADIL 932


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
            predicted protein [Populus trichocarpa]
          Length = 933

 Score =  223 bits (568), Expect = 8e-56
 Identities = 142/391 (36%), Positives = 207/391 (52%), Gaps = 17/391 (4%)
 Frame = -2

Query: 1251 ENRSK----------VPSLGLNVIGGDALNKLLEQKLRELTYGIESSSRNLIKPMEVATS 1102
            +NRSK          + S G NVIGGDAL+ LLEQK+RELT  +ESSS            
Sbjct: 563  DNRSKRLLLDTDSMNLSSGGYNVIGGDALSTLLEQKMRELTKTVESSSS----------- 611

Query: 1101 ASFWPELVSDLNAVSTTPKDCDNRAKLG--VHRDSIVYDSNCFST-----KAHRFQEAEE 943
                   +S  ++  T P+  DN+ +    + R    YD +  ST     +  R  +  +
Sbjct: 612  -------LSTFSSGGTAPRLHDNKDESVSCIDRSDSCYDCHFLSTDPAALRLKRILQGVD 664

Query: 942  VDEHSIDSSTVRKDSNCRQPSPVSILEPCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 763
              + S  S+  RK  +CR+PSPVS+LE  F                              
Sbjct: 665  EMDCSSKSNDSRKFLDCRRPSPVSVLEHSFSTESSSSLDSADSCITEGSRHCSSIQVQEV 724

Query: 762  XXXSRPKKFQXXXXXXXXXXXXXSTCTGYFSRECGTRFSMRNVRKTDKRELGYVREVVNN 583
               S  KKF              S+ TG   R+     ++  + ++ K E+ YV++++ N
Sbjct: 725  HGLSSSKKFHFVDVDTELSDSASSSSTGTVDRKHANMLAVTGLARSTKWEIEYVKKILCN 784

Query: 582  ADLMFRDLALGRVHEMVNPHLFEKLENQKSWSRSASKEESNSRLRRRVLFDCVAECLDLR 403
             +LMF+D ALGR  +++NPHLF +LE +K    S   +  ++RL R+VLFDC +ECLDLR
Sbjct: 785  IELMFQDFALGRASKIINPHLFHQLERRKDMFES---DGVDARLERKVLFDCASECLDLR 841

Query: 402  CKPYVGGSCRKWAKGIAVVQQEGRLAEEIYKEISSFRSMGDWMLDSLVDKDMSTKHGKWL 223
            C+ Y GG  + W KG  +V+++  L E++ KEI  + SMGD M+D LVDKDMS+++G+WL
Sbjct: 842  CRRYAGGGYKAWVKGTTMVRRKEWLGEDVCKEILEWSSMGDCMVDELVDKDMSSQYGRWL 901

Query: 222  DFELEELEVGGEISRRILSSLVDEVVADILL 130
            DFE++    G E+  +I +SLV+EVVADILL
Sbjct: 902  DFEIDAFAFGVEVESQIFNSLVNEVVADILL 932


>ref|XP_003594803.1| hypothetical protein MTR_2g034810 [Medicago truncatula]
            gi|355483851|gb|AES65054.1| hypothetical protein
            MTR_2g034810 [Medicago truncatula]
          Length = 923

 Score =  217 bits (553), Expect = 4e-54
 Identities = 135/367 (36%), Positives = 198/367 (53%), Gaps = 2/367 (0%)
 Frame = -2

Query: 1227 LGLNVIGGDALNKLLEQKLRELTYGIESSSRNLIKPMEVATSASFWPELVSDLNAVSTTP 1048
            +G NVIGGDAL  LLEQKLRELT G+E+SS ++ K  + + +A    +  S+ N V    
Sbjct: 561  IGYNVIGGDALGILLEQKLRELTSGVETSSNDVSKVRQPSVTAPMSNDQASNFNIVGLNL 620

Query: 1047 KDCDNRAKLGVHRDSIVYDSNCFSTKAHRFQEAEEVDEHSIDSSTVRKDS-NCRQPSPVS 871
                 + +     DS+  +S+C S  +      E   +H      +   S NCRQPSP+S
Sbjct: 621  GLQQKKDQDMSFTDSL--NSSCGSNISSFTNLPESSLKHKSWGDEMESLSFNCRQPSPIS 678

Query: 870  ILEPCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPKKFQXXXXXXXXXXXXXS 691
            +LEP F                                 +  +KF              S
Sbjct: 679  VLEPSFSVESCESSMSADVTSIEGSKMFSSIQAQEIHGFNFSRKFYPTESDAELSDSASS 738

Query: 690  TCTG-YFSRECGTRFSMRNVRKTDKRELGYVREVVNNADLMFRDLALGRVHEMVNPHLFE 514
            T T     ++ GT   M+  R +   EL YV+E++ N +LM+ D +LGR  E+VN HLF 
Sbjct: 739  TSTTTMIKKQTGTFSMMKFGRSSTTWELDYVKEILCNVELMYMDFSLGRSREVVNSHLFN 798

Query: 513  KLENQKSWSRSASKEESNSRLRRRVLFDCVAECLDLRCKPYVGGSCRKWAKGIAVVQQEG 334
            +LE++K       K +  SR+ R+V+FDCV+EC+DLR + YVGG  R W KG  +V++  
Sbjct: 799  QLESRKG----GFKSDDESRMERKVIFDCVSECMDLRSRSYVGGGYRMWTKGFEMVKRND 854

Query: 333  RLAEEIYKEISSFRSMGDWMLDSLVDKDMSTKHGKWLDFELEELEVGGEISRRILSSLVD 154
             LA+++YKEI   + M D M+D LVDKDMS+++GKWLD+E++  E G E+  +I +SLVD
Sbjct: 855  WLAKDVYKEILCLKGMRDSMVDELVDKDMSSQYGKWLDYEVDAYEFGEEVVDQIFNSLVD 914

Query: 153  EVVADIL 133
            +VV ++L
Sbjct: 915  DVVYEML 921


>ref|XP_002271833.2| PREDICTED: uncharacterized protein LOC100256774 [Vitis vinifera]
          Length = 270

 Score =  214 bits (544), Expect = 5e-53
 Identities = 121/272 (44%), Positives = 161/272 (59%), Gaps = 1/272 (0%)
 Frame = -2

Query: 942 VDEHSIDSST-VRKDSNCRQPSPVSILEPCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 766
           +DE S  S+   R   +CR PSPVSILEP F                             
Sbjct: 1   MDECSSSSNAEARNLLDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQE 60

Query: 765 XXXXSRPKKFQXXXXXXXXXXXXXSTCTGYFSRECGTRFSMRNVRKTDKRELGYVREVVN 586
               S  KKF              ST T   + +     +   + ++ K EL YV+E++ 
Sbjct: 61  LISLSFSKKFNSMEADAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILC 120

Query: 585 NADLMFRDLALGRVHEMVNPHLFEKLENQKSWSRSASKEESNSRLRRRVLFDCVAECLDL 406
           N +LMF+D ALGR  E++NPHLF +LEN+K        E   SRL R+VLFDCV+ECLDL
Sbjct: 121 NIELMFKDFALGRAREIINPHLFHQLENRKGGLEIDGDE---SRLNRKVLFDCVSECLDL 177

Query: 405 RCKPYVGGSCRKWAKGIAVVQQEGRLAEEIYKEISSFRSMGDWMLDSLVDKDMSTKHGKW 226
           RC+ YVGG C+ WAKG+ +V+++  L+EE+YKEIS +RSMGD M+D LVDKDMS+++G+W
Sbjct: 178 RCRRYVGGGCKTWAKGVTMVRRKEWLSEEVYKEISGWRSMGDCMVDELVDKDMSSQYGRW 237

Query: 225 LDFELEELEVGGEISRRILSSLVDEVVADILL 130
           LDFE+E  E+G EI   + +SLVDE+VADILL
Sbjct: 238 LDFEVETFELGVEIESLLFTSLVDEIVADILL 269


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