BLASTX nr result

ID: Coptis21_contig00009607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009607
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273690.1| PREDICTED: uncharacterized protein LOC100245...   110   4e-22
ref|XP_002510551.1| conserved hypothetical protein [Ricinus comm...   107   4e-21
ref|XP_003549467.1| PREDICTED: uncharacterized protein LOC100787...   106   5e-21
ref|XP_003545029.1| PREDICTED: uncharacterized protein LOC100779...   106   6e-21
ref|XP_002306941.1| predicted protein [Populus trichocarpa] gi|2...   103   4e-20

>ref|XP_002273690.1| PREDICTED: uncharacterized protein LOC100245337 [Vitis vinifera]
          Length = 106

 Score =  110 bits (274), Expect = 4e-22
 Identities = 56/117 (47%), Positives = 74/117 (63%)
 Frame = +3

Query: 237 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVVGALTWDVSRKP 416
           I D VVAN+T++YL  IA +K + + TGR+FSG FV++ ST  V  I++G L WDVSRK 
Sbjct: 3   ISDAVVANLTTIYLVAIAAIKAYGLATGRSFSGGFVLVTSTAAVVLILIGTLAWDVSRKA 62

Query: 417 TYAAAALSADPYCYYADSSSSRQNDREKPLRRGGICWHGVSVQSTVSQIRFQLPQQP 587
           TYA +                   D    + RGGICWHGV+V+S+ SQ+RF+LPQQP
Sbjct: 63  TYALS------------------RDHVHEMCRGGICWHGVAVKSSASQVRFRLPQQP 101


>ref|XP_002510551.1| conserved hypothetical protein [Ricinus communis]
           gi|223551252|gb|EEF52738.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score =  107 bits (266), Expect = 4e-21
 Identities = 53/119 (44%), Positives = 80/119 (67%)
 Frame = +3

Query: 237 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVVGALTWDVSRKP 416
           + D V+ N+T++Y+ VIA +K + ++ GR+FSG FV+++ST VV  I++G+LTWDVSRK 
Sbjct: 3   VSDAVIGNLTTIYVAVIAGIKAYGLVCGRSFSGGFVLILSTSVVGLILIGSLTWDVSRKA 62

Query: 417 TYAAAALSADPYCYYADSSSSRQNDREKPLRRGGICWHGVSVQSTVSQIRFQLPQQPLP 593
           TY   A+S D + +  +            + +GGICWHGV+V+S  SQ+RF+LPQ   P
Sbjct: 63  TY---AISRDHHIHVHE------------MCKGGICWHGVAVRSPASQVRFRLPQHHQP 106


>ref|XP_003549467.1| PREDICTED: uncharacterized protein LOC100787853 [Glycine max]
          Length = 117

 Score =  106 bits (265), Expect = 5e-21
 Identities = 56/120 (46%), Positives = 75/120 (62%)
 Frame = +3

Query: 237 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVVGALTWDVSRKP 416
           + D VV+N+T LY+ +I  +K +  + GR+FSGCFV++ ST  VA I+V  LTWDVSRK 
Sbjct: 3   VSDAVVSNLTLLYVALILSIKAYGFLCGRSFSGCFVLVASTAAVALILVATLTWDVSRKA 62

Query: 417 TYAAAALSADPYCYYADSSSSRQNDREKPLRRGGICWHGVSVQSTVSQIRFQLPQQPLPF 596
           TYA AA+   P                    +GGICWHGV+V+S  SQ+RF+LPQ  LP+
Sbjct: 63  TYAFAAVQPPP-------PPPPPPHHTHETCKGGICWHGVAVRSPASQVRFRLPQN-LPY 114


>ref|XP_003545029.1| PREDICTED: uncharacterized protein LOC100779434 [Glycine max]
          Length = 113

 Score =  106 bits (264), Expect = 6e-21
 Identities = 56/120 (46%), Positives = 77/120 (64%)
 Frame = +3

Query: 237 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVVGALTWDVSRKP 416
           + D V++N+T LY+ VIA +K +  + GR+FSG FV++VST  VA I+V  LTWDVSRK 
Sbjct: 3   VSDAVMSNLTVLYVAVIACIKAYGFLCGRSFSGWFVLVVSTAAVALILVATLTWDVSRKA 62

Query: 417 TYAAAALSADPYCYYADSSSSRQNDREKPLRRGGICWHGVSVQSTVSQIRFQLPQQPLPF 596
           TYA A     P  ++   +            +GGICWHGV+V+S  SQ+RF+LPQ  LP+
Sbjct: 63  TYAFATDQPPPPPHHTHEAC-----------KGGICWHGVAVRSPASQVRFRLPQN-LPY 110


>ref|XP_002306941.1| predicted protein [Populus trichocarpa] gi|222856390|gb|EEE93937.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score =  103 bits (257), Expect = 4e-20
 Identities = 50/115 (43%), Positives = 74/115 (64%)
 Frame = +3

Query: 237 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVVGALTWDVSRKP 416
           + D V+ N+T++Y+ VIA +K++ ++ GR+FSG FV+++ST VV  I+ G L WD+SRK 
Sbjct: 3   LSDAVIGNLTTIYVAVIAGIKVYGLVCGRSFSGGFVLILSTIVVGLILTGTLAWDISRKA 62

Query: 417 TYAAAALSADPYCYYADSSSSRQNDREKPLRRGGICWHGVSVQSTVSQIRFQLPQ 581
           TYA                 SR +     + +GGICWHGV+V+S  SQ+RF+LPQ
Sbjct: 63  TYAI----------------SRDHVNVHEMCKGGICWHGVAVRSPASQVRFRLPQ 101


Top