BLASTX nr result
ID: Coptis21_contig00009602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009602
(1898 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|... 450 e-124
gb|AFK41173.1| unknown [Lotus japonicus] 443 e-122
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li... 441 e-121
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li... 421 e-115
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li... 398 e-108
>ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|223535752|gb|EEF37414.1|
exonuclease, putative [Ricinus communis]
Length = 504
Score = 450 bits (1158), Expect = e-124
Identities = 250/546 (45%), Positives = 345/546 (63%), Gaps = 7/546 (1%)
Frame = -3
Query: 1872 MDETILSSEKQVLVGVVKMAQKQGLKGDKGGWKDFLTVHDTKMGTSMSDPAKRSVDDXXX 1693
M+ + + +++LV +VK+AQKQG KG +GGWK+FL V+D K+G+S+SDPAKR+
Sbjct: 1 MENKLATVPEKILVEIVKLAQKQGRKGTQGGWKEFLNVYDKKIGSSLSDPAKRT------ 54
Query: 1692 XXXXSILFERNILVKIELTTYPWTNFQI*GWKFERIM*FQTYEDDLVTFLRTFSKEEDLK 1513
LV+FL+TF+ + DLK
Sbjct: 55 ------------------------------------------RPTLVSFLQTFTHKSDLK 72
Query: 1512 FFATMVRGITKCAAVKQLSESSTEAESPQQKLVRSTIQHPDYLLNYSFPSENEEWVATKL 1333
F ++R + + Q+ + S + ESP+Q+LVR T++HP YL Y+FPS ++ WV TKL
Sbjct: 73 FVDYVLRLHSNREVLDQIRQESPDNESPEQRLVRLTVEHPFYLSKYAFPSYDQGWVVTKL 132
Query: 1332 GKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELVNPNKAIADYRTDI 1153
K SK + ++S++A+DCEMVLC+D TEALV+VCVVD N++VKL+E VNP K +ADYRT+I
Sbjct: 133 PKKSKLMSTDSIIAIDCEMVLCEDGTEALVRVCVVDRNLQVKLDEKVNPYKPVADYRTEI 192
Query: 1152 TGLSAKDLEGVTCTLANVQKKMKKLLRQGTILVGHSLSNDLHALKLDHARVIDTSYIFEG 973
TG++A+DL+GV+C+LA++QK MKKLL++GTILVGH L NDL ALKLDHARV+DTS+IF
Sbjct: 193 TGVTARDLDGVSCSLADIQKFMKKLLQKGTILVGHGLYNDLQALKLDHARVVDTSFIFRR 252
Query: 972 PTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHGFDGTISCISKHSQ 793
R SL+ LCK++LG+E+RK GAPHNC+DDA AAMKL +AK+E G D I H
Sbjct: 253 LDGRPPSLDTLCKSVLGFELRKGGAPHNCMDDASAAMKLFLAKIERGVDNDIPV--NHEH 310
Query: 792 VPESESAKLLLHGISMDVPQEELRRIFP-GFTFEFQPRLNIRKQLQKKYSICAVFNDPQE 616
V E+E AKLLLHGI DV EEL R+FP FT E +P K+ + +YS A+F DPQE
Sbjct: 311 VLENELAKLLLHGIPTDVHSEELHRVFPEQFTIELKP----PKKGRVQYSALAIFKDPQE 366
Query: 615 ADKAFQSIEKEVEKDSFGHPQKYVVFERSTGLHTTFFVRKMAPDGSTEQPTSKKRPLE-E 439
A AF ++ +EKD G QK + + TG +VRKM D Q KKR + E
Sbjct: 367 AHCAFDNLNGRLEKDKNGLLQKMITLKLKTGATANLYVRKMGHDHFIHQDLQKKRAFQGE 426
Query: 438 NKGDGSLVQCTSTKKRSTEVENRDECEHHIKEIERLKKELRQR-----DDEVANLQKIIT 274
+ G +TKK RD+C+ H+KEIERLK+EL+++ DD + ++K+
Sbjct: 427 DIG--------NTKKL-----KRDDCDDHVKEIERLKQELKEKDLSKCDDHMKEIEKLKQ 473
Query: 273 ALTRKQ 256
L+ K+
Sbjct: 474 NLSSKE 479
>gb|AFK41173.1| unknown [Lotus japonicus]
Length = 525
Score = 443 bits (1139), Expect = e-122
Identities = 251/542 (46%), Positives = 341/542 (62%), Gaps = 12/542 (2%)
Frame = -3
Query: 1872 MDETILSSEKQVLVGVVKMAQKQGLKGDKGGWKDFLTVHDTKMGTSMSDPAKRSVDDXXX 1693
MD+ I +++K+VLV +VK++QK+G+KG+ G WK+FL +D K G SMSDPAKR+
Sbjct: 4 MDDKIDAADKKVLVDIVKLSQKRGMKGNLGDWKEFLNSYDKKFGASMSDPAKRT------ 57
Query: 1692 XXXXSILFERNILVKIELTTYPWTNFQI*GWKFERIM*FQTYEDDLVTFLRTFSKEEDLK 1513
+ L FL+TFSKE+DLK
Sbjct: 58 ------------------------------------------HEVLAAFLKTFSKEDDLK 75
Query: 1512 FFATMVRGITKCAAVKQLSESSTEAESPQQKLVRSTIQHPDYLLNYSFPSENEEWVATKL 1333
FFA ++R + +V++L + S + SP+Q LV+ T+QHP Y L+YSF S +E WV L
Sbjct: 76 FFANIMRHHSNQYSVEKLKDKSHD--SPEQGLVQITLQHPLYPLDYSFQSIDEGWVIINL 133
Query: 1332 GKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELVNPNKAIADYRTDI 1153
K+ KA++S +MVAVDCEMVLC+D TEALV+VCVVD N++VKL++ V P+KAI DYRT++
Sbjct: 134 RKNKKAMRSTAMVAVDCEMVLCEDGTEALVEVCVVDHNLKVKLHKRVKPDKAIVDYRTEV 193
Query: 1152 TGLSAKDLEGVTCTLANVQKKMKKLLRQGTILVGHSLSNDLHALKLDHARVIDTSYIFE- 976
TG+S++DLE VTCTLA++QKKMK+LL GTILVGHSL NDL LKLDH RV+DT+YIF+
Sbjct: 194 TGVSSRDLETVTCTLADIQKKMKRLLSNGTILVGHSLDNDLRVLKLDHVRVVDTAYIFQS 253
Query: 975 --GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHGFDGTISCISK 802
G RK SLN LC+ +LGYEVR+ GAPHNCLDDA AAMKL++A+++HG D
Sbjct: 254 LGGSIHRKPSLNGLCQAVLGYEVREKGAPHNCLDDACAAMKLVLARIKHGVDKEFPFTLV 313
Query: 801 HSQVPESESAKLLLHGISMDVPQEELRRIFPG-FTFEFQPRLNIRKQLQKKYSICAVFND 625
V ES+ KL LHGI V E L +I PG FT E +P RK + KYS A F +
Sbjct: 314 QEHVSESDMTKLPLHGIPTSVNIETLHKIVPGDFTTEVKPS---RKGQRAKYSALATFKN 370
Query: 624 PQEADKAFQSIEKEVEKDSFGHPQKYVVFERSTGLHTTFFVRKMAPDGSTEQPTSKKRPL 445
QEA +A+++++ KDSFG PQK V+F STG+ + FVRKM D + KR L
Sbjct: 371 QQEAYEAYENVQGSQTKDSFGRPQKEVMFRPSTGMTVSLFVRKMTAD-EPDNLLQSKRAL 429
Query: 444 EENKGDGSLVQCTSTKKRSTEVE--------NRDECEHHIKEIERLKKELRQRDDEVANL 289
+ ++ D V + K ++E D C H+KEIE L ++L+Q+D E+ +L
Sbjct: 430 QVDEAD-EAVNASKKAKTVPQIEEDVLIGSTKGDTCT-HLKEIEALNEQLKQKDLEIESL 487
Query: 288 QK 283
++
Sbjct: 488 RE 489
>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
Length = 509
Score = 441 bits (1133), Expect = e-121
Identities = 248/544 (45%), Positives = 334/544 (61%), Gaps = 11/544 (2%)
Frame = -3
Query: 1872 MDETILSSEKQVLVGVVKMAQKQGLKGDKGGWKDFLTVHDTKMGTSMSDPAKRSVDDXXX 1693
M++ I +++K+VLV +VK+AQK+GLKG+ GGWK+FL HD K G +SDP+KRS
Sbjct: 1 MEDKIETADKKVLVDIVKLAQKRGLKGNLGGWKEFLNSHDKKFGAGLSDPSKRS------ 54
Query: 1692 XXXXSILFERNILVKIELTTYPWTNFQI*GWKFERIM*FQTYEDDLVTFLRTFSKEEDLK 1513
+ L FL+TFSKEEDLK
Sbjct: 55 ------------------------------------------HEVLAAFLKTFSKEEDLK 72
Query: 1512 FFATMVRGITKCAAVKQLSESSTEAESPQQKLVRSTIQHPDYLLNYSFPSENEEWVATKL 1333
FF ++R + +++L + S + SP+Q+LV++T+QHP Y L+YSFPS +E W+
Sbjct: 73 FFDNIMRHHSNQYMLERLKDKSHD--SPEQRLVQATLQHPLYPLDYSFPSIDEGWIVVNF 130
Query: 1332 GKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELVNPNKAIADYRTDI 1153
K +KS MVAVDCEMVLC+D TEA+V+VCVVD N+EVKL++LV P+K IADYRT+I
Sbjct: 131 KNKPKVMKSTEMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLVKPDKEIADYRTEI 190
Query: 1152 TGLSAKDLEGVTCTLANVQKKMKKLLRQGTILVGHSLSNDLHALKLDHARVIDTSYIF-- 979
TG+S++DLE VTC+LA++QK MKKLL G ILVGHSL NDL LKLDH RVIDTSYIF
Sbjct: 191 TGVSSQDLEAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDHVRVIDTSYIFQS 250
Query: 978 -EGPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHGFDGTISCISK 802
+G ++ SLN LC+ +L +EVR+ GAPHNCLDDA+AAM L++AK++HG D
Sbjct: 251 LDGSIHKRPSLNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKIKHGVDKEFPIALV 310
Query: 801 HSQVPESESAKLLLHGISMDVPQEELRRIFPG-FTFEFQPRLNIRKQLQKKYSICAVFND 625
VPESE AKLLLH I V E L +I PG F E +P RK YS A+F
Sbjct: 311 QEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELKPS---RKGQGANYSAFAIFRS 367
Query: 624 PQEADKAFQSIEKEVEKDSFGHPQKYVVFERSTGLHTTFFVRKMAPDGSTEQPTSKKRPL 445
P EAD A+++++ KD++GHPQK V F STGL FVRKM + +Q T KR L
Sbjct: 368 PPEADGAYENVQGSQLKDTYGHPQKLVTFRLSTGLSVNLFVRKMVTEEPNDQ-TPSKRAL 426
Query: 444 EENKGDGSLVQCTSTKKRSTEVE-------NRDECEHHIKEIERLKKELRQRDDEVANLQ 286
+ N+ V + K ++E + + + H KEIE L ++L+Q + + +L+
Sbjct: 427 QINEA----VDVSKKAKMDPKIEEDASAGFGKGDTDAHSKEIEALNQQLKQSEMVIESLR 482
Query: 285 KIIT 274
K +T
Sbjct: 483 KQLT 486
>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
degrading nuclease 3-like [Cucumis sativus]
Length = 524
Score = 421 bits (1083), Expect = e-115
Identities = 240/529 (45%), Positives = 329/529 (62%), Gaps = 6/529 (1%)
Frame = -3
Query: 1872 MDETILSSEKQVLVGVVKMAQKQGLKGDKGGWKDFLTVHDTKMGTSMSDPAKRSVDDXXX 1693
M++ I ++EK+VLV +V++ QK+G+ G +G WK+FL D K G SMSDP+KR
Sbjct: 1 MEDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRP------ 54
Query: 1692 XXXXSILFERNILVKIELTTYPWTNFQI*GWKFERIM*FQTYEDDLVTFLRTFSKEEDLK 1513
D L+ FL+TF KEEDL
Sbjct: 55 ------------------------------------------NDLLIAFLKTFDKEEDLM 72
Query: 1512 FFATMVRGITKCAAVKQLSESSTEAESPQQKLVRSTIQHPDYLLNYSFPSENEEWVATKL 1333
F + + K VKQ+S+ + E ESP+QKLVR T++HP Y L YSFPS ++EWV TK
Sbjct: 73 FLDKVFQCNEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYSFPSYDKEWVVTKF 132
Query: 1332 GKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELVNPNKAIADYRTDI 1153
+ SK SN + A+DCEMVLC+D TE LV+VC+VD +++VK++ELV P KAI DYRTDI
Sbjct: 133 SQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVKPRKAIKDYRTDI 192
Query: 1152 TGLSAKDLEGVTCTLANVQKKMKKLLRQG-TILVGHSLSNDLHALKLDHARVIDTSYIFE 976
TG+S DL+GV+C+LA+VQK + K L G TILVGHSL+NDL ALKLDH+RVIDTS+IF+
Sbjct: 193 TGISPGDLDGVSCSLADVQKSITKFLSHGRTILVGHSLNNDLQALKLDHSRVIDTSFIFK 252
Query: 975 ---GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHGFDGTISCIS 805
G R+ SL+ LCK++LGY++RK+GAPHNCLDDA+AAMKL++AKLE D I+ +
Sbjct: 253 YSNGSIYRRPSLSKLCKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAKLESKADDGIAIVD 312
Query: 804 KHSQVPESESAKLLLHGISMDVPQEELRRIFPG-FTFEFQPRLNIRKQLQKKYSICAVFN 628
+ P+ KLLLH I ++VP E L + G FT E +P + Q YS A+F
Sbjct: 313 E--DTPQVGMEKLLLHRIPINVPSEALAKAIHGDFTIELKPPK--KGQGGDIYSALAIFQ 368
Query: 627 DPQEADKAFQSIEKEVEKDSFGHPQKYVVFERSTGLHTTFFVRKMAPDGSTEQPTSKKRP 448
+P+EA +AF+ +E +DS G PQK + F+ S G + +VRKM + +SKKR
Sbjct: 369 NPKEALQAFEEVEGNAYEDSSGRPQKLIRFQHS-GSIVSIYVRKMGQKDFMDNFSSKKRD 427
Query: 447 LEENKG-DGSLVQCTSTKKRSTEVENRDECEHHIKEIERLKKELRQRDD 304
LE + S Q T+ K + N C +H++E+ERLK+EL+Q++D
Sbjct: 428 LEVIENIVMSKKQKTANKMEIETISNSSRCCNHVEEVERLKQELKQKED 476
>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
Length = 389
Score = 398 bits (1023), Expect = e-108
Identities = 209/399 (52%), Positives = 269/399 (67%), Gaps = 4/399 (1%)
Frame = -3
Query: 1872 MDETILSSEKQVLVGVVKMAQKQGLKGDKGGWKDFLTVHDTKMGTSMSDPAKRSVDDXXX 1693
MD T++++EK+VLV +VK+AQK+GL+G KG WKDFL+ +D K+G S+SDP++R V
Sbjct: 1 MDNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPV----- 55
Query: 1692 XXXXSILFERNILVKIELTTYPWTNFQI*GWKFERIM*FQTYEDDLVTFLRTFSKEEDLK 1513
D LV+FL+TFSKEEDLK
Sbjct: 56 -------------------------------------------DTLVSFLKTFSKEEDLK 72
Query: 1512 FFATMVRGITKCAAVKQLSESSTEAESPQQKLVRSTIQHPDYLLNYSFPSENEEWVATKL 1333
FFA +++ V++ S ESP+Q+L+R T++HP Y L+YSFPS E W+ TK+
Sbjct: 73 FFAKILQCYANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSFPSHEEGWMVTKI 132
Query: 1332 GKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELVNPNKAIADYRTDI 1153
+ K +SN+M+AVDCEMVLC+D TE LV+VCVVD N++VKLNELV P+KA+ DYRT+I
Sbjct: 133 RQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDRNLQVKLNELVKPHKAVVDYRTEI 192
Query: 1152 TGLSAKDLEGVTCTLANVQKKMKKLLRQGTILVGHSLSNDLHALKLDHARVIDTSYIFE- 976
TG+SAKD + T +L ++Q+ MKKLL G +LVGHSL NDL ALKLDHARVIDT++I++
Sbjct: 193 TGVSAKDFDETTSSLVDIQRSMKKLLSHGAVLVGHSLHNDLKALKLDHARVIDTAFIYKY 252
Query: 975 --GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHGFDGTISCISK 802
P R+ SLN+LCK+ILGYEVR+ APHNCLDDA AAMKL++AKLE G D I +
Sbjct: 253 ENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKLEQGLDDAIPFV-- 310
Query: 801 HSQVPESESAKLLLHGISMDVPQEELRRIFPG-FTFEFQ 688
H VPE+E AKLLLH I DVP EEL RI PG FT E Q
Sbjct: 311 HEDVPENEMAKLLLHRIPTDVPIEELNRIIPGEFTMEHQ 349