BLASTX nr result

ID: Coptis21_contig00009585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009585
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279389.1| PREDICTED: probable ATP synthase 24 kDa subu...   303   5e-80
emb|CAN62814.1| hypothetical protein VITISV_031883 [Vitis vinifera]   303   5e-80
ref|XP_002532180.1| conserved hypothetical protein [Ricinus comm...   286   8e-75
ref|XP_003525085.1| PREDICTED: probable ATP synthase 24 kDa subu...   276   5e-72
ref|XP_004164946.1| PREDICTED: probable ATP synthase 24 kDa subu...   276   6e-72

>ref|XP_002279389.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial
           [Vitis vinifera] gi|296082520|emb|CBI21525.3| unnamed
           protein product [Vitis vinifera]
          Length = 240

 Score =  303 bits (776), Expect = 5e-80
 Identities = 158/203 (77%), Positives = 172/203 (84%)
 Frame = +1

Query: 1   LSRSKQLIRGQVTVQQQHMPQVRFFAKEAARPSLKGDEMLKNIFLEVKNKFETAIGVLRK 180
           LS+SKQL   Q+ +QQQH   VRFFAKEAA P+LKGDEMLKNIFLEVK KFETA+GVLRK
Sbjct: 8   LSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFETAMGVLRK 67

Query: 181 EKITLAPEDPAAVTQYKNVMKTVREKAGLLSESERIKYTIQSRTQNIPDARTYLLTLKEI 360
           EKIT+ PEDPAAV QY  VMKTVREKA L SES+RI+YTIQ+RTQ IPDARTYLLTLKEI
Sbjct: 68  EKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTYLLTLKEI 127

Query: 361 RIKRGLPDDLGAEVMMMDAXXXXXXXXXXXXXRSDKKGMALLIAEFDKINKKLGIRKEDL 540
           RIKRGL D+LGAE MMMDA             R+DKKGMALL+AEFDK+NKKLG+RKEDL
Sbjct: 128 RIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKLGVRKEDL 187

Query: 541 PKYEEQLELKIAKAQLEELKKDA 609
           PKYEEQLELKIAKAQLEELKKDA
Sbjct: 188 PKYEEQLELKIAKAQLEELKKDA 210


>emb|CAN62814.1| hypothetical protein VITISV_031883 [Vitis vinifera]
          Length = 240

 Score =  303 bits (776), Expect = 5e-80
 Identities = 158/203 (77%), Positives = 172/203 (84%)
 Frame = +1

Query: 1   LSRSKQLIRGQVTVQQQHMPQVRFFAKEAARPSLKGDEMLKNIFLEVKNKFETAIGVLRK 180
           LS+SKQL   Q+ +QQQH   VRFFAKEAA P+LKGDEMLKNIFLEVK KFETA+GVLRK
Sbjct: 8   LSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFETAMGVLRK 67

Query: 181 EKITLAPEDPAAVTQYKNVMKTVREKAGLLSESERIKYTIQSRTQNIPDARTYLLTLKEI 360
           EKIT+ PEDPAAV QY  VMKTVREKA L SES+RI+YTIQ+RTQ IPDARTYLLTLKEI
Sbjct: 68  EKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTYLLTLKEI 127

Query: 361 RIKRGLPDDLGAEVMMMDAXXXXXXXXXXXXXRSDKKGMALLIAEFDKINKKLGIRKEDL 540
           RIKRGL D+LGAE MMMDA             R+DKKGMALL+AEFDK+NKKLG+RKEDL
Sbjct: 128 RIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKLGVRKEDL 187

Query: 541 PKYEEQLELKIAKAQLEELKKDA 609
           PKYEEQLELKIAKAQLEELKKDA
Sbjct: 188 PKYEEQLELKIAKAQLEELKKDA 210


>ref|XP_002532180.1| conserved hypothetical protein [Ricinus communis]
           gi|223528128|gb|EEF30198.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  286 bits (731), Expect = 8e-75
 Identities = 152/206 (73%), Positives = 173/206 (83%), Gaps = 3/206 (1%)
 Frame = +1

Query: 1   LSRSKQLIRGQVTVQQQHMP-QVRFFAK--EAARPSLKGDEMLKNIFLEVKNKFETAIGV 171
           LSRSKQ+   +V +QQQ +   VR+FAK  +AA P+LKGDEMLKN+FL+VK KFETAIG+
Sbjct: 8   LSRSKQVYGNRVIMQQQELVIPVRYFAKKADAAPPALKGDEMLKNVFLDVKRKFETAIGI 67

Query: 172 LRKEKITLAPEDPAAVTQYKNVMKTVREKAGLLSESERIKYTIQSRTQNIPDARTYLLTL 351
           LRKEKIT+APEDPAAV+QY  VMKT+REKA L SES+RIKYTI++RT++IPDARTYLLTL
Sbjct: 68  LRKEKITIAPEDPAAVSQYAKVMKTIREKADLFSESQRIKYTIETRTKDIPDARTYLLTL 127

Query: 352 KEIRIKRGLPDDLGAEVMMMDAXXXXXXXXXXXXXRSDKKGMALLIAEFDKINKKLGIRK 531
           +EIRIKRGL D+LGAE MMMDA             R+DKKGMALL AEFDKINKKLGIRK
Sbjct: 128 REIRIKRGLTDELGAEAMMMDALEKVENELKKPLMRNDKKGMALLTAEFDKINKKLGIRK 187

Query: 532 EDLPKYEEQLELKIAKAQLEELKKDA 609
           EDLPKYEE LELKIAKAQLEELKKDA
Sbjct: 188 EDLPKYEEDLELKIAKAQLEELKKDA 213


>ref|XP_003525085.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like
           [Glycine max]
          Length = 241

 Score =  276 bits (707), Expect = 5e-72
 Identities = 142/202 (70%), Positives = 166/202 (82%)
 Frame = +1

Query: 4   SRSKQLIRGQVTVQQQHMPQVRFFAKEAARPSLKGDEMLKNIFLEVKNKFETAIGVLRKE 183
           S+SK +   Q+ +Q++H   VR FAKE+A P+LKGDEMLKNIF+EVKNKFETAIG+L+KE
Sbjct: 9   SKSKLIYGSQILLQKEHAIPVRHFAKESAPPALKGDEMLKNIFVEVKNKFETAIGILKKE 68

Query: 184 KITLAPEDPAAVTQYKNVMKTVREKAGLLSESERIKYTIQSRTQNIPDARTYLLTLKEIR 363
           KIT+ PEDPAAV+ Y  VMKT+REKA LLSES+ I  TI+  TQ+IPDARTYLLTLKEIR
Sbjct: 69  KITIDPEDPAAVSHYAKVMKTIREKASLLSESQDILSTIEIETQDIPDARTYLLTLKEIR 128

Query: 364 IKRGLPDDLGAEVMMMDAXXXXXXXXXXXXXRSDKKGMALLIAEFDKINKKLGIRKEDLP 543
           +KRGL DDLGAE +M+DA             R+DKKGM LL+AEFDKINKKLGIRKEDLP
Sbjct: 129 VKRGLTDDLGAEALMIDALDKVEKDLKKPLLRNDKKGMDLLLAEFDKINKKLGIRKEDLP 188

Query: 544 KYEEQLELKIAKAQLEELKKDA 609
           KYEE+LELK+AKAQLEELKKDA
Sbjct: 189 KYEEELELKVAKAQLEELKKDA 210


>ref|XP_004164946.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like
           [Cucumis sativus]
          Length = 240

 Score =  276 bits (706), Expect = 6e-72
 Identities = 143/203 (70%), Positives = 165/203 (81%)
 Frame = +1

Query: 1   LSRSKQLIRGQVTVQQQHMPQVRFFAKEAARPSLKGDEMLKNIFLEVKNKFETAIGVLRK 180
           LS+SKQ++  Q  + Q H+  VR FAKEAA P+LKGDEMLKNIFLEVK KFETA+ V +K
Sbjct: 8   LSKSKQVLGSQSILHQGHVFPVRHFAKEAAPPALKGDEMLKNIFLEVKKKFETALAVFKK 67

Query: 181 EKITLAPEDPAAVTQYKNVMKTVREKAGLLSESERIKYTIQSRTQNIPDARTYLLTLKEI 360
           EKIT+ P+DPAAV QY  VMK  REKA L SES+RIKYTIQ+RTQ+IPDAR+YLL LKEI
Sbjct: 68  EKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDARSYLLALKEI 127

Query: 361 RIKRGLPDDLGAEVMMMDAXXXXXXXXXXXXXRSDKKGMALLIAEFDKINKKLGIRKEDL 540
           RIKRGL DDLGAE MM DA             R+DKKGM++L+AEFDKIN+KLGIR+EDL
Sbjct: 128 RIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSVLMAEFDKINQKLGIRREDL 187

Query: 541 PKYEEQLELKIAKAQLEELKKDA 609
           PKYEEQLELKI+KAQLEE+KKDA
Sbjct: 188 PKYEEQLELKISKAQLEEMKKDA 210


Top