BLASTX nr result
ID: Coptis21_contig00009575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009575
(2102 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 709 0.0
emb|CBI15398.3| unnamed protein product [Vitis vinifera] 709 0.0
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ... 684 0.0
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2... 689 0.0
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 634 0.0
>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
[Vitis vinifera]
Length = 580
Score = 709 bits (1830), Expect(2) = 0.0
Identities = 355/411 (86%), Positives = 371/411 (90%)
Frame = +2
Query: 602 ICPTRELAIQTHSVAQDLLKYHTQTLGLIIGGANRRGEAERLVKGVNLLVATPGRFLDHL 781
ICPTRELAIQTH+VA+DLLKYHTQTLGL+IGG+ RRGEAERL KG NLLVATPGR LDHL
Sbjct: 170 ICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDHL 229
Query: 782 QNTKGFIYXXXXXXXXXXXXXXXXXXXXXXMKQIIKLLPKERQTALFSATQTKKVEDLAR 961
QNTKGFIY MKQIIKLLPKERQTALFSATQTKKVEDLAR
Sbjct: 230 QNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKERQTALFSATQTKKVEDLAR 289
Query: 962 LSFQTTPVYIDVDDGRSKVTVEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 1141
LSFQTTPVYIDVDDGR+KVT EGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN
Sbjct: 290 LSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 349
Query: 1142 SVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 1321
SVKYHSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIP VDW
Sbjct: 350 SVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDW 409
Query: 1322 IVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 1501
IVQ+DPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVKEYE+D K
Sbjct: 410 IVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVK 469
Query: 1502 KLANVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFS 1681
KLANVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA+SFCFS
Sbjct: 470 KLANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFCFS 529
Query: 1682 SPPKVSLGLDSSASKFRKKVRKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1834
SPPKV+L +DSSASKFRKK KVEG R+G +ESNPYGR RG+DDKRQFVRY
Sbjct: 530 SPPKVNLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 580
Score = 140 bits (352), Expect(2) = 0.0
Identities = 69/89 (77%), Positives = 77/89 (86%)
Frame = +3
Query: 267 GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 446
GIMSTE FS L + + TM AI ++GF MTQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 87 GIMSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAF 146
Query: 447 LVPAIELLYNIQFSPRNGTGVVVICPTRE 533
L+PA+ELLY+I F PRNGTGVVVICPTRE
Sbjct: 147 LIPAVELLYHISFMPRNGTGVVVICPTRE 175
>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 709 bits (1830), Expect(2) = 0.0
Identities = 355/411 (86%), Positives = 371/411 (90%)
Frame = +2
Query: 602 ICPTRELAIQTHSVAQDLLKYHTQTLGLIIGGANRRGEAERLVKGVNLLVATPGRFLDHL 781
ICPTRELAIQTH+VA+DLLKYHTQTLGL+IGG+ RRGEAERL KG NLLVATPGR LDHL
Sbjct: 82 ICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDHL 141
Query: 782 QNTKGFIYXXXXXXXXXXXXXXXXXXXXXXMKQIIKLLPKERQTALFSATQTKKVEDLAR 961
QNTKGFIY MKQIIKLLPKERQTALFSATQTKKVEDLAR
Sbjct: 142 QNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKERQTALFSATQTKKVEDLAR 201
Query: 962 LSFQTTPVYIDVDDGRSKVTVEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 1141
LSFQTTPVYIDVDDGR+KVT EGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN
Sbjct: 202 LSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 261
Query: 1142 SVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 1321
SVKYHSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIP VDW
Sbjct: 262 SVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDW 321
Query: 1322 IVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 1501
IVQ+DPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVKEYE+D K
Sbjct: 322 IVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVK 381
Query: 1502 KLANVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFS 1681
KLANVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA+SFCFS
Sbjct: 382 KLANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFCFS 441
Query: 1682 SPPKVSLGLDSSASKFRKKVRKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1834
SPPKV+L +DSSASKFRKK KVEG R+G +ESNPYGR RG+DDKRQFVRY
Sbjct: 442 SPPKVNLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 492
Score = 136 bits (342), Expect(2) = 0.0
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 273 MSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAFLV 452
MSTE FS L + + TM AI ++GF MTQIQAR+IPPLL GKDVLGAARTGSGKTLAFL+
Sbjct: 1 MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60
Query: 453 PAIELLYNIQFSPRNGTGVVVICPTRE 533
PA+ELLY+I F PRNGTGVVVICPTRE
Sbjct: 61 PAVELLYHISFMPRNGTGVVVICPTRE 87
>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 590
Score = 684 bits (1766), Expect(2) = 0.0
Identities = 343/411 (83%), Positives = 367/411 (89%)
Frame = +2
Query: 602 ICPTRELAIQTHSVAQDLLKYHTQTLGLIIGGANRRGEAERLVKGVNLLVATPGRFLDHL 781
ICPTRELAIQTH+VA+DLLKYH+QTLGL+IGG+ R+GEAER+VKGVNLLVATPGR LDHL
Sbjct: 182 ICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARKGEAERIVKGVNLLVATPGRLLDHL 241
Query: 782 QNTKGFIYXXXXXXXXXXXXXXXXXXXXXXMKQIIKLLPKERQTALFSATQTKKVEDLAR 961
QNTKGFIY MKQIIK+LPK RQTALFSATQTKKVEDLAR
Sbjct: 242 QNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLAR 301
Query: 962 LSFQTTPVYIDVDDGRSKVTVEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 1141
LSFQ TPVYIDVDDGR+KVT EGLQQGYCVV SAKRF+LLYSFLKRNLSKKVMVFFSSCN
Sbjct: 302 LSFQITPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRFILLYSFLKRNLSKKVMVFFSSCN 361
Query: 1142 SVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 1321
SVK+HSELL+YIQV+CFDIHGKQKQQKRT+TFFDFCKAEKGILLCTDVAARGLDIPAVDW
Sbjct: 362 SVKFHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDW 421
Query: 1322 IVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 1501
IVQ+DPPDEPKEYIHRVGRTARGEGGKG+ALLFLIPEELQFLRYLKAAKVPVKEYEFD K
Sbjct: 422 IVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDVK 481
Query: 1502 KLANVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFS 1681
KLANVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA SFCFS
Sbjct: 482 KLANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFS 541
Query: 1682 SPPKVSLGLDSSASKFRKKVRKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1834
PPKV+L +DS+ASKFRKK K G R+G +ESNPYGR R ED+ RQFVR+
Sbjct: 542 CPPKVNLNIDSNASKFRKKAHK--GSRNGFSESNPYGRQRDEDNTRQFVRH 590
Score = 146 bits (369), Expect(2) = 0.0
Identities = 69/89 (77%), Positives = 80/89 (89%)
Frame = +3
Query: 267 GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 446
GIMST++F L + + T AIQE+GFQY+TQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 99 GIMSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAF 158
Query: 447 LVPAIELLYNIQFSPRNGTGVVVICPTRE 533
L+PA+ELLYN+ F+PRNGTGVVVICPTRE
Sbjct: 159 LIPAVELLYNVHFAPRNGTGVVVICPTRE 187
>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 689 bits (1778), Expect(2) = 0.0
Identities = 347/411 (84%), Positives = 366/411 (89%)
Frame = +2
Query: 602 ICPTRELAIQTHSVAQDLLKYHTQTLGLIIGGANRRGEAERLVKGVNLLVATPGRFLDHL 781
ICPTRELAIQTH+VA+DLLKYH+QTLGL+IGGA RRGEAERLVKGVNLLVATPGR LDHL
Sbjct: 166 ICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAARRGEAERLVKGVNLLVATPGRLLDHL 225
Query: 782 QNTKGFIYXXXXXXXXXXXXXXXXXXXXXXMKQIIKLLPKERQTALFSATQTKKVEDLAR 961
QNTKGFIY MKQIIKLLPK RQTALFSATQTKKVEDLAR
Sbjct: 226 QNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKLLPKARQTALFSATQTKKVEDLAR 285
Query: 962 LSFQTTPVYIDVDDGRSKVTVEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 1141
LSFQTTPVYIDVDDGR+KVT EGLQQGYCVVPSAKRFVLLYSF KRNLSKKVMVFFSSCN
Sbjct: 286 LSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFFKRNLSKKVMVFFSSCN 345
Query: 1142 SVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 1321
SVK+H++LL+YIQV+CFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW
Sbjct: 346 SVKFHADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 405
Query: 1322 IVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 1501
IVQFDPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVKEYEFDQK
Sbjct: 406 IVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 465
Query: 1502 KLANVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFS 1681
KLANVQS LEKLV NN+YL KSA DAYRSY+LAYNSHSMKDIFNVHRLDLQAVA SFCFS
Sbjct: 466 KLANVQSQLEKLVANNYYLNKSAKDAYRSYMLAYNSHSMKDIFNVHRLDLQAVAASFCFS 525
Query: 1682 SPPKVSLGLDSSASKFRKKVRKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1834
SPPKV+L ++S+ASKFRKK K G R+G NESNPYGR D+KRQF RY
Sbjct: 526 SPPKVNLNMESNASKFRKKTHK--GSRNGFNESNPYGRQSDGDEKRQFARY 574
Score = 139 bits (351), Expect(2) = 0.0
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +3
Query: 267 GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 446
GIMSTE+F L + + T IQE+GF+ +TQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 83 GIMSTESFDSLGLSEATRKTIQEMGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAF 142
Query: 447 LVPAIELLYNIQFSPRNGTGVVVICPTRE 533
L+PA+ELL+N+ F+PRNGTGVVVICPTRE
Sbjct: 143 LIPAVELLHNVHFAPRNGTGVVVICPTRE 171
>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max]
Length = 575
Score = 634 bits (1635), Expect(2) = 0.0
Identities = 316/411 (76%), Positives = 353/411 (85%)
Frame = +2
Query: 602 ICPTRELAIQTHSVAQDLLKYHTQTLGLIIGGANRRGEAERLVKGVNLLVATPGRFLDHL 781
ICPTRELAIQTH+VA++LLKYH+QTLGL+IGG+ R+ EAER+ KG+NLLV TPGR LDHL
Sbjct: 168 ICPTRELAIQTHAVAKELLKYHSQTLGLVIGGSARKIEAERIAKGINLLVGTPGRLLDHL 227
Query: 782 QNTKGFIYXXXXXXXXXXXXXXXXXXXXXXMKQIIKLLPKERQTALFSATQTKKVEDLAR 961
QNTKGFIY MKQIIK+LPK RQTALFSATQTKKVEDLAR
Sbjct: 228 QNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLAR 287
Query: 962 LSFQTTPVYIDVDDGRSKVTVEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCN 1141
LSFQTTP+YIDVDDGR+KVT EGL QGY VVP AKRF++LYSFLKR+ SKKVMVFFSSCN
Sbjct: 288 LSFQTTPIYIDVDDGRTKVTNEGLLQGYVVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCN 347
Query: 1142 SVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 1321
SVK+H+++L IQ++C IHGKQKQQ RT+TFFDFCKAEKGILLCTDVAARGLDIPAVDW
Sbjct: 348 SVKFHADILNLIQLNCSSIHGKQKQQSRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDW 407
Query: 1322 IVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 1501
IVQ+DPPDEPKEYIHRVGRTARGEGGKG+ALLFLIPEELQFLRYLKAAKVPVKEY +D+K
Sbjct: 408 IVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEK 467
Query: 1502 KLANVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFS 1681
K+ANVQSHLE LV NNFYL K A +AYRSYILAYNSHSMKDIFN+H LDLQAVA+SFCFS
Sbjct: 468 KVANVQSHLENLVVNNFYLNKMAKEAYRSYILAYNSHSMKDIFNIHHLDLQAVASSFCFS 527
Query: 1682 SPPKVSLGLDSSASKFRKKVRKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1834
+PP VSL ++S SK R K+RKV+G RHG + NPYG+ R DDKRQFVRY
Sbjct: 528 NPPNVSLNINS--SKQRNKMRKVDGSRHGFSGDNPYGK-RNADDKRQFVRY 575
Score = 141 bits (355), Expect(2) = 0.0
Identities = 66/92 (71%), Positives = 79/92 (85%)
Frame = +3
Query: 258 GSFGIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKT 437
G GIMSTE+F L + + T AI ++GF +MTQIQAR+IPPLL GKDVLGAARTGSGKT
Sbjct: 82 GGSGIMSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKT 141
Query: 438 LAFLVPAIELLYNIQFSPRNGTGVVVICPTRE 533
LAFL+PA+ELLYN++F+PRNG GV+VICPTRE
Sbjct: 142 LAFLIPAVELLYNVKFTPRNGAGVIVICPTRE 173