BLASTX nr result

ID: Coptis21_contig00009547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009547
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002300704.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002510536.1| conserved hypothetical protein [Ricinus comm...    91   7e-17

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/140 (44%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
 Frame = -3

Query: 471 MAWFFRDRRGPEWKQNWTSQTLSSVSXXXXXXXXXXXXXXXXLSLSRYTDYKVHMEQTMI 292
           M WF+  RRGPEWKQ WT QTL S+S                L LS+YTDYK  +  + I
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 291 NFRLLLFIIPVALIFIVRNLSIDGKLSFRL--PRAAHNSLGLAGNGSSPWGVAXXXXXXX 118
           NF+L LF++PV LI ++ + S +    FRL  PR+   S+  A   S PWG+A       
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLL 120

Query: 117 LMISYKSSFDSQWFRPLWRS 58
           +++SY+SSF S+WF PLWRS
Sbjct: 121 VLLSYQSSFHSKWFGPLWRS 140


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/132 (37%), Positives = 73/132 (55%)
 Frame = -3

Query: 471 MAWFFRDRRGPEWKQNWTSQTLSSVSXXXXXXXXXXXXXXXXLSLSRYTDYKVHMEQTMI 292
           M WF+  RRGPEWKQ WT QT+ SVS                L LS YT YK  +  + I
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 291 NFRLLLFIIPVALIFIVRNLSIDGKLSFRLPRAAHNSLGLAGNGSSPWGVAXXXXXXXLM 112
           N ++ L ++P+ LI  + + S +  L +RL  + H+S     +GS PWG+A       ++
Sbjct: 61  NLQIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDS-DPRSSGSFPWGIAIFVVVLLML 119

Query: 111 ISYKSSFDSQWF 76
           +SY+S+F S+WF
Sbjct: 120 LSYRSTFHSKWF 131


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/135 (36%), Positives = 74/135 (54%)
 Frame = -3

Query: 471 MAWFFRDRRGPEWKQNWTSQTLSSVSXXXXXXXXXXXXXXXXLSLSRYTDYKVHMEQTMI 292
           M WF+  RRGPEWKQ WT QT++S+S                L LS YT Y+  +  + +
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 291 NFRLLLFIIPVALIFIVRNLSIDGKLSFRLPRAAHNSLGLAGNGSSPWGVAXXXXXXXLM 112
           N ++ LF++P+ LI  + + S +  L +RL  +  +S       S PWG+A       ++
Sbjct: 61  NLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDS-APRSTSSFPWGIAVFVVLLLML 119

Query: 111 ISYKSSFDSQWFRPL 67
           +SY+SSF S+WF PL
Sbjct: 120 LSYQSSFHSKWFGPL 134


>ref|XP_002300704.1| predicted protein [Populus trichocarpa] gi|222842430|gb|EEE79977.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = -3

Query: 471 MAWFFRDRRGPEWKQNWTSQTLSSVSXXXXXXXXXXXXXXXXLSLSRYTDYKVHMEQTMI 292
           MAW  +  RGP WKQ WT +TL+S+S                LS+S +  YK  M+  +I
Sbjct: 1   MAWLLKHTRGPAWKQEWTQRTLASLSLPPFPLVAIFFIIILLLSVSSFMSYKNQMQHALI 60

Query: 291 NFRLLLFIIPVALIFIVRNLSIDGKLSFRLPRAAHNSLGLAGNGS--SPWGVAXXXXXXX 118
           NF+LLL  +PV LIF+    S      F   +A +   G A N S   PWG+A       
Sbjct: 61  NFKLLLLFLPVLLIFLAMFASKVETFMFPNTKAQY---GSADNRSWNLPWGLAVLVVVLL 117

Query: 117 LMISYKSSFDSQWFRPLWRS 58
           +M++Y+SSF S W   +WRS
Sbjct: 118 VMVNYRSSFQSMWSPIVWRS 137


>ref|XP_002510536.1| conserved hypothetical protein [Ricinus communis]
           gi|223551237|gb|EEF52723.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/138 (35%), Positives = 71/138 (51%)
 Frame = -3

Query: 471 MAWFFRDRRGPEWKQNWTSQTLSSVSXXXXXXXXXXXXXXXXLSLSRYTDYKVHMEQTMI 292
           M W + +RRGP WKQ W   T++S+S                L +S Y +YK  M+ T I
Sbjct: 1   MGWLWPERRGPAWKQGWAEHTIASISPPPFPLLAIFLIIFLLLFVSSYFNYKYQMQHTFI 60

Query: 291 NFRLLLFIIPVALIFIVRNLSIDGKLSFRLPRAAHNSLGLAGNGSSPWGVAXXXXXXXLM 112
           +F+L L  +PV LIFI + +S   +  F   +A + +  +  N   PWGVA       +M
Sbjct: 61  HFKLFLLFLPVLLIFIAKLVSKTERPFFPATKAVYGT--VRPNWDLPWGVAVLLVVLLVM 118

Query: 111 ISYKSSFDSQWFRPLWRS 58
           +SY+SS  S W   +WRS
Sbjct: 119 VSYQSSLRSVWSPLVWRS 136


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