BLASTX nr result

ID: Coptis21_contig00009539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009539
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   114   2e-23
emb|CBI15337.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
dbj|BAJ11967.1| MdFBX19 [Malus x domestica]                            74   3e-11

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  114 bits (285), Expect = 2e-23
 Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 10/207 (4%)
 Frame = -2

Query: 741 EIPVDNVPGDYGIAVCSCHGLLCVFACNTLCSKSAS--LVIYNPITRESLELPETGFDLK 568
           EI +  V G   I + SC+GLLC      L S+ +   ++I NPITR+ + LPE+  +  
Sbjct: 93  EIALPTVLGRNLIVMSSCNGLLC------LASEESPNPVIISNPITRKYIVLPES-VNAS 145

Query: 567 AAFIS-VGFGFDSTSKKYKVVQFFKFCIGNDQCMKGEIITLGEGSWRELDLSGMVLCDEV 391
            +FI  VG G+D  + KYKVV+ +   I N +  + EIITLGE SWR+LD+   V+C   
Sbjct: 146 YSFIQLVGLGYDPWNMKYKVVRSY---IDNSKFTRFEIITLGEASWRQLDVPCRVVCGRN 202

Query: 390 AKSVFLDGALHWMIESEGH---SGCDKILVLDLCDEKFQTIKLPSSII----DAIRYPAK 232
           ++ ++ +GAL+W+++ + H    GC  IL  DL +EKF  I LP +I     +   Y   
Sbjct: 203 SRPIYCEGALYWILDKKFHYDGDGC--ILAFDLREEKFGMIALPPNIRMPTGNPGLYNGS 260

Query: 231 VFLLNLGGCLSLVEHNYCERFCVWRIV 151
           + LLN+ GCL+++  + C+   +W+++
Sbjct: 261 LHLLNVAGCLTVIA-DECQFLHIWQVM 286


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 78/226 (34%), Positives = 110/226 (48%), Gaps = 2/226 (0%)
 Frame = -2

Query: 693 SCHGLLCVFACNTLCSKSASLVIYNPITRESLELP--ETGFDLKAAFISVGFGFDSTSKK 520
           SC+GLLC+    T  S+   + I NPITRE + LP  ETGF L      VG GFDS++ K
Sbjct: 250 SCNGLLCI----TSDSELGPVYISNPITREFVILPSPETGFSLLRH--QVGLGFDSSNGK 303

Query: 519 YKVVQFFKFCIGNDQCMKGEIITLGEGSWRELDLSGMVLCDEVAKSVFLDGALHWMIESE 340
           Y VV+ +       Q  K E I LGE SWR L +  ++    +  SVF +GALHW I+ +
Sbjct: 304 YIVVRAYTDK-SKSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSVFWNGALHWKIKKK 362

Query: 339 GHSGCDKILVLDLCDEKFQTIKLPSSIIDAIRYPAKVFLLNLGGCLSLVEHNYCERFCVW 160
               C  +L  D+   KF   + P S       P    ++ L G LSLV+  Y  +  +W
Sbjct: 363 PGREC--MLSFDVSSGKFAVTRFPVS----ADVPDDFEMVELDGHLSLVQ-VYDTQMKIW 415

Query: 159 RIVCANTKKGHKFYKSSYSMTMPYNTFIDNVGLQDVLIDNNFLFHV 22
           R+     +     Y+  Y M + +N+   N  +    ID  +L  V
Sbjct: 416 RVTGEKIEGLSVCYEDMYCMNVRWNSSF-NCEIIRGYIDEGYLLQV 460


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 73/229 (31%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
 Frame = -2

Query: 696 CSCHGLLCVFACNTLCSKSASLVIYNPITRESLELPETGFDLKAAFISVGFGFDSTSKKY 517
           C C G LC+ +   L      + I NPIT+ES+ LP +          + FGFD +S KY
Sbjct: 120 CFCDGFLCMASEKRL----DPVCICNPITKESVILPLSRSKAHLVRHKLAFGFDQSSGKY 175

Query: 516 KVVQFFKFCIGNDQCMKGEIITLGEGSWRELDLSGMVLCDEVAKSVFLDGALHWMIESEG 337
           KV++ ++    N    K +IITLGE SWR+L+    +   +   +VF +G+LHW+I+ + 
Sbjct: 176 KVIRDYRTS-SNKHLSKFQIITLGESSWRQLNPPQNLCTSDWDAAVFWNGSLHWIIDDKT 234

Query: 336 HSGCDKILVLDLCDEKFQTIKLPSSIIDAIRYPAKVFLLNLGGCLSLVEHNYCERFCVWR 157
               + IL  DL  E F TI      +    Y  +V    LG  L++VEHN      +W 
Sbjct: 235 ID--EPILAFDLSSETFYTIPFHRLCLSHECYELQV----LGASLTIVEHN-SHMIKIWE 287

Query: 156 IV-------CANTKKGHK---------FYKS----SYSMTMPYNTFIDN 70
           +         AN ++ H          FYK+    S+   M    FIDN
Sbjct: 288 VAGNKVKGFSANCREEHDTYVCWNKYLFYKTISQLSHKSFMLQVCFIDN 336


>ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|222873760|gb|EEF10891.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 9/221 (4%)
 Frame = -2

Query: 729 DNVPGDYGIAVCSCHGLLCVFACNTLCSKSASLVIYNPITRESLELPETGFDL---KAAF 559
           D +P      V SC+GLL +   ++   K+  LV  NPITRE + +P T  D    +   
Sbjct: 116 DQLPFSGIEVVNSCNGLLYL---SSYLDKNPVLVC-NPITREYINIPATHTDHQQERLQA 171

Query: 558 ISVGFGFDSTSKKYKVVQFFKFCIGN------DQCMKGEIITLGEGSWRELDLSGMVLCD 397
           ++ G GF   S +YK+++ F    G+          + EI TLG+GSWR +D     +  
Sbjct: 172 VASGLGFSLKSNQYKLLRIFDVGYGHGFDNLRSHGRQAEIYTLGKGSWRVIDQFPPRIPH 231

Query: 396 EVAKSVFLDGALHWMIESEGHSGCDKILVLDLCDEKFQTIKLPSSIIDAIRYPAKVFLLN 217
                 +L G + W   ++ +   D I+  +   E+F+ + LP       +  + + +  
Sbjct: 232 SFLFGTYLKGTISWACANDINDKFDFIISFNFDKEQFEFVSLPPYSAANHKGISDLRMQG 291

Query: 216 LGGCLSLVEHNYCERFCVWRIVCANTKKGHKFYKSSYSMTM 94
           LGGC+S+ + +  E F +W +     KK  K +   Y + M
Sbjct: 292 LGGCISVCDFSCAEYFDIWLLKDFGGKK--KIWSKDYRIHM 330


>dbj|BAJ11967.1| MdFBX19 [Malus x domestica]
          Length = 394

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
 Frame = -2

Query: 714 DYGIAVCSCHGLLCVFACNTLCSKSASLVIYNPITRESLELPET----------GFDLKA 565
           D+ +    C+G++C+ A         ++++ NP TRE  +LP++           F+L+ 
Sbjct: 116 DFVLIFGYCNGIVCIEA-------GKNVLLCNPATREFRQLPDSCLLLPSPPEGKFELET 168

Query: 564 AFISVGFGFDSTSKKYKVVQFFKFCIGNDQ----------CMKGEIITLGEGSWRELDLS 415
           +F ++GFG+DS +K++KVV+  + C  +D+              E+ T    SW+E+ + 
Sbjct: 169 SFQALGFGYDSNAKEHKVVRIIENCEYSDEERTFYHRIALPHTAELYTATANSWKEIKID 228

Query: 414 GMVLCDEVAKSVFLDGALHWMIESEGHSGCDKILVLDLCDEKFQTIKLPSSIIDAIRY 241
                   ++SVF+ G  +W        G + IL  DL D+KF  I+LPS      R+
Sbjct: 229 ISSTTYSCSRSVFMKGFCYWY----ATDGEEYILSFDLSDDKFHIIQLPSRRESGFRF 282


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