BLASTX nr result

ID: Coptis21_contig00009507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009507
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285702.1| PREDICTED: protein CutA, chloroplastic [Viti...   224   2e-56
ref|NP_001239721.1| uncharacterized protein LOC100792337 [Glycin...   211   2e-52
ref|XP_004152609.1| PREDICTED: protein CutA, chloroplastic-like ...   209   9e-52
emb|CBI19237.3| unnamed protein product [Vitis vinifera]              209   9e-52
gb|AFK35990.1| unknown [Medicago truncatula]                          200   3e-49

>ref|XP_002285702.1| PREDICTED: protein CutA, chloroplastic [Vitis vinifera]
          Length = 189

 Score =  224 bits (572), Expect = 2e-56
 Identities = 126/191 (65%), Positives = 133/191 (69%), Gaps = 9/191 (4%)
 Frame = +3

Query: 57  MASALCCKXXXXXXXXXXXFRRRLPLVGAFCIXXXXXXXXXXXXXXXXXXXXX----FTP 224
           MAS LCCK            RRRLPLVGAFC+                         F P
Sbjct: 1   MASTLCCKASSIVSSSAV--RRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGP 58

Query: 225 FLRPPTN-----RSVHSSAMEGSSNSVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNR 389
           FLR         +SV S  ME +  +VPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNR
Sbjct: 59  FLRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNR 118

Query: 390 VPGIESVYEWKGEIQTDSEELLIIKTRESLLNALTDHVKANHEYDLPEVIALPIIGGNLP 569
           VPGIESVY W+GEIQTDSEELLIIKTRESLL ALT+HVKANHEYD+PEVIALPI GGNL 
Sbjct: 119 VPGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYDVPEVIALPITGGNLQ 178

Query: 570 YLEWIKNSTRD 602
           YLEWIKNSTRD
Sbjct: 179 YLEWIKNSTRD 189


>ref|NP_001239721.1| uncharacterized protein LOC100792337 [Glycine max]
           gi|255646799|gb|ACU23871.1| unknown [Glycine max]
          Length = 173

 Score =  211 bits (536), Expect = 2e-52
 Identities = 114/169 (67%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
 Frame = +3

Query: 117 RRRLPLVGAFCIXXXXXXXXXXXXXXXXXXXXXFTPFLRPPTN-------RSVHSSAMEG 275
           RRRLPLVGAFC+                      TPF             RS  S+ MEG
Sbjct: 18  RRRLPLVGAFCMLSLGLSNLC-------------TPFHSSALKTGSKFGIRSHSSTRMEG 64

Query: 276 SSNSVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYEWKGEIQTDSEELL 455
           S+++VPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVY+W+G+IQTDSEELL
Sbjct: 65  SNSTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWEGKIQTDSEELL 124

Query: 456 IIKTRESLLNALTDHVKANHEYDLPEVIALPIIGGNLPYLEWIKNSTRD 602
           IIKTR+SLL ALT+HVK NHEYD+PEVI+LPI GGNL YLEWIK STRD
Sbjct: 125 IIKTRQSLLEALTEHVKTNHEYDVPEVISLPITGGNLKYLEWIKESTRD 173


>ref|XP_004152609.1| PREDICTED: protein CutA, chloroplastic-like [Cucumis sativus]
           gi|449508932|ref|XP_004163447.1| PREDICTED: protein
           CutA, chloroplastic-like [Cucumis sativus]
          Length = 185

 Score =  209 bits (531), Expect = 9e-52
 Identities = 113/167 (67%), Positives = 125/167 (74%), Gaps = 5/167 (2%)
 Frame = +3

Query: 117 RRRLPLVGAFCIXXXXXXXXXXXXXXXXXXXXXFTPFLRPPTN-----RSVHSSAMEGSS 281
           RRRLPLVGAFC+                     F P LR         R+VH   MEGSS
Sbjct: 20  RRRLPLVGAFCVLSFGISNLFVSKTGSALSLP-FVPLLRSKLAGQGPARNVHLIKMEGSS 78

Query: 282 NSVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYEWKGEIQTDSEELLII 461
            +VPSIVVYVTVPN+EAGKKLAESIVKEKLAACVN VPGIESVY+WKGEIQ+D EELLII
Sbjct: 79  AAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQSDPEELLII 138

Query: 462 KTRESLLNALTDHVKANHEYDLPEVIALPIIGGNLPYLEWIKNSTRD 602
           KTR+SLL ALTDHVKANH Y++PEVIALPI GG+L YLEWIK+ST+D
Sbjct: 139 KTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD 185


>emb|CBI19237.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  209 bits (531), Expect = 9e-52
 Identities = 108/134 (80%), Positives = 114/134 (85%), Gaps = 5/134 (3%)
 Frame = +3

Query: 216 FTPFLRPPTN-----RSVHSSAMEGSSNSVPSIVVYVTVPNKEAGKKLAESIVKEKLAAC 380
           F PFLR         +SV S  ME +  +VPSIVVYVTVPNKEAGKKLAESIVKEKLAAC
Sbjct: 27  FGPFLRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAAC 86

Query: 381 VNRVPGIESVYEWKGEIQTDSEELLIIKTRESLLNALTDHVKANHEYDLPEVIALPIIGG 560
           VNRVPGIESVY W+GEIQTDSEELLIIKTRESLL ALT+HVKANHEYD+PEVIALPI GG
Sbjct: 87  VNRVPGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYDVPEVIALPITGG 146

Query: 561 NLPYLEWIKNSTRD 602
           NL YLEWIKNSTRD
Sbjct: 147 NLQYLEWIKNSTRD 160


>gb|AFK35990.1| unknown [Medicago truncatula]
          Length = 182

 Score =  200 bits (509), Expect = 3e-49
 Identities = 107/164 (65%), Positives = 124/164 (75%), Gaps = 2/164 (1%)
 Frame = +3

Query: 117 RRRLPLVGAFCIXXXXXXXXXXXXXXXXXXXXXFTPFLRPPTNRSVHSSAMEGSSNS--V 290
           RRRLP+VGAFC+                      +      + +S +   MEG++N+  V
Sbjct: 21  RRRLPIVGAFCMLTLGLTNFYTPLYSSALKTE--SKLSSRFSTKSSNFIRMEGNTNNTTV 78

Query: 291 PSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYEWKGEIQTDSEELLIIKTR 470
           PSIVVYVTVPNKEAGKKLAESIV EKLAACVNRVPGIESVY+W+G+IQTDSEELLIIKTR
Sbjct: 79  PSIVVYVTVPNKEAGKKLAESIVTEKLAACVNRVPGIESVYQWEGKIQTDSEELLIIKTR 138

Query: 471 ESLLNALTDHVKANHEYDLPEVIALPIIGGNLPYLEWIKNSTRD 602
           +SLL ALTDHVKANHEYD+PEVI+LPI GGNL YLEW+K STR+
Sbjct: 139 QSLLEALTDHVKANHEYDVPEVISLPITGGNLKYLEWLKESTRE 182


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