BLASTX nr result

ID: Coptis21_contig00009486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009486
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277761.1| PREDICTED: choline transporter-like protein ...   196   1e-48
ref|XP_002533861.1| conserved hypothetical protein [Ricinus comm...   190   9e-47
ref|XP_004147033.1| PREDICTED: choline transporter-like protein ...   185   4e-45
ref|NP_568045.1| Plasma-membrane choline transporter family prot...   184   7e-45
ref|XP_004158379.1| PREDICTED: choline transporter-like protein ...   184   9e-45

>ref|XP_002277761.1| PREDICTED: choline transporter-like protein 3 [Vitis vinifera]
           gi|297744628|emb|CBI37890.3| unnamed protein product
           [Vitis vinifera]
          Length = 550

 Score =  196 bits (499), Expect = 1e-48
 Identities = 101/141 (71%), Positives = 112/141 (79%)
 Frame = -3

Query: 425 AVDFLNKFTINFAAITGEGYWSSAKMTYELLKRNLLSAVFVETVSTRILGGIIFVLSAVY 246
           A+DFLNKFTINFAAITGE Y +SA+MTYELLKRNLLSAVFVETVS+RILGGI+FV SA+Y
Sbjct: 402 AIDFLNKFTINFAAITGEAYCTSARMTYELLKRNLLSAVFVETVSSRILGGIVFVFSAIY 461

Query: 245 AIAVCAVLKAVSNLGVDAYFXXXXXXXXXXXXXXXXXXXLDNVIDTVYVCFAIDKDKGEV 66
           AI  CA+LKAVSNLG DAYF                   LDNVIDTVYVC+AID+D+GEV
Sbjct: 462 AIVACAILKAVSNLGADAYFVAALAWVLLILVLGFFVHVLDNVIDTVYVCYAIDRDRGEV 521

Query: 65  SKQEVHEVYVYLPISRNNRPS 3
            KQEVHEVYV LPI RN+R S
Sbjct: 522 CKQEVHEVYVNLPIRRNHRSS 542


>ref|XP_002533861.1| conserved hypothetical protein [Ricinus communis]
           gi|223526198|gb|EEF28525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  190 bits (483), Expect = 9e-47
 Identities = 97/139 (69%), Positives = 110/139 (79%)
 Frame = -3

Query: 425 AVDFLNKFTINFAAITGEGYWSSAKMTYELLKRNLLSAVFVETVSTRILGGIIFVLSAVY 246
           AVDFLNKFT+NFAAITGE Y +SAKMTYELLKRNLLSAVFVETVS+R+L GI FVLSA+Y
Sbjct: 177 AVDFLNKFTVNFAAITGEAYCTSAKMTYELLKRNLLSAVFVETVSSRLLAGIAFVLSAIY 236

Query: 245 AIAVCAVLKAVSNLGVDAYFXXXXXXXXXXXXXXXXXXXLDNVIDTVYVCFAIDKDKGEV 66
           AI VCA+LK  S LGVD+YF                   LDNVIDTVYVC+A+D+D+GEV
Sbjct: 237 AIVVCAILKGASKLGVDSYFVAVLAWALLIVVLGFFVHVLDNVIDTVYVCYAVDRDRGEV 296

Query: 65  SKQEVHEVYVYLPISRNNR 9
            K EVHEVYV+LPISRN+R
Sbjct: 297 YKPEVHEVYVHLPISRNHR 315


>ref|XP_004147033.1| PREDICTED: choline transporter-like protein 1-like [Cucumis
           sativus]
          Length = 556

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/141 (65%), Positives = 109/141 (77%)
 Frame = -3

Query: 425 AVDFLNKFTINFAAITGEGYWSSAKMTYELLKRNLLSAVFVETVSTRILGGIIFVLSAVY 246
           AVD+LNKF I FAA+TGE Y SSA+MTYELLKRNLLS VFVET+STR+L GI FVLSA+Y
Sbjct: 408 AVDYLNKFAITFAAVTGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIY 467

Query: 245 AIAVCAVLKAVSNLGVDAYFXXXXXXXXXXXXXXXXXXXLDNVIDTVYVCFAIDKDKGEV 66
           AI  CA+L AVS+LG+D YF                   LDNVI+TVYVC+AID+D+GEV
Sbjct: 468 AIVACAILHAVSHLGIDTYFIAVAAWLLLIVVLTFFIHVLDNVIETVYVCYAIDRDRGEV 527

Query: 65  SKQEVHEVYVYLPISRNNRPS 3
            KQ+VHEVYV+LPISRN+R S
Sbjct: 528 CKQDVHEVYVHLPISRNHRSS 548


>ref|NP_568045.1| Plasma-membrane choline transporter family protein [Arabidopsis
           thaliana] gi|16649077|gb|AAL24390.1| putative protein
           [Arabidopsis thaliana] gi|21387167|gb|AAM47987.1|
           putative protein [Arabidopsis thaliana]
           gi|332661557|gb|AEE86957.1| Plasma-membrane choline
           transporter family protein [Arabidopsis thaliana]
          Length = 556

 Score =  184 bits (467), Expect = 7e-45
 Identities = 95/141 (67%), Positives = 111/141 (78%)
 Frame = -3

Query: 425 AVDFLNKFTINFAAITGEGYWSSAKMTYELLKRNLLSAVFVETVSTRILGGIIFVLSAVY 246
           A+D+LNKFTINFAAITGE Y +SAKMTYELL+RNLLSAVFVETVSTRIL GI+FVLSA Y
Sbjct: 408 ALDYLNKFTINFAAITGEAYCTSAKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAY 467

Query: 245 AIAVCAVLKAVSNLGVDAYFXXXXXXXXXXXXXXXXXXXLDNVIDTVYVCFAIDKDKGEV 66
           A+A  AVL+ VSNLG+D+Y                    LD+VIDT+YVC+AID+DKG+V
Sbjct: 468 AVATWAVLRGVSNLGIDSYVVAVLAWVLLIVILAFFVHVLDDVIDTIYVCYAIDRDKGDV 527

Query: 65  SKQEVHEVYVYLPISRNNRPS 3
            KQEVHEVYV+LPISR+ R S
Sbjct: 528 CKQEVHEVYVHLPISRSTRSS 548


>ref|XP_004158379.1| PREDICTED: choline transporter-like protein 1-like [Cucumis
           sativus]
          Length = 556

 Score =  184 bits (466), Expect = 9e-45
 Identities = 92/141 (65%), Positives = 109/141 (77%)
 Frame = -3

Query: 425 AVDFLNKFTINFAAITGEGYWSSAKMTYELLKRNLLSAVFVETVSTRILGGIIFVLSAVY 246
           AVD+LNKF I FAA+TGE Y +SA+MTYELLKRNLLS VFVET+STR+L GI FVLSA+Y
Sbjct: 408 AVDYLNKFAITFAAVTGEAYCTSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIY 467

Query: 245 AIAVCAVLKAVSNLGVDAYFXXXXXXXXXXXXXXXXXXXLDNVIDTVYVCFAIDKDKGEV 66
           AI  CA+L AVS+LG+D YF                   LDNVI+TVYVC+AID+D+GEV
Sbjct: 468 AIVACAILHAVSHLGIDTYFIAVAAWLLLIVVLTFFIHVLDNVIETVYVCYAIDRDRGEV 527

Query: 65  SKQEVHEVYVYLPISRNNRPS 3
            KQ+VHEVYV+LPISRN+R S
Sbjct: 528 CKQDVHEVYVHLPISRNHRSS 548


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