BLASTX nr result

ID: Coptis21_contig00009429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009429
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Viti...   172   6e-41
emb|CBI15587.3| unnamed protein product [Vitis vinifera]              172   6e-41
gb|ABK94223.1| unknown [Populus trichocarpa]                          162   5e-38
ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|2...   159   6e-37
ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycin...   153   4e-35

>ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Vitis vinifera]
          Length = 103

 Score =  172 bits (436), Expect = 6e-41
 Identities = 82/104 (78%), Positives = 94/104 (90%)
 Frame = +1

Query: 151 MAMYIRVKREKTTYFLQCDPTETVVDIKHKLFGLIDKPVSDQRLVLVATGEVLDDAKTLA 330
           MAMYIRVKR KTTYFLQCDPTET++D+K KL  LID+P++DQRL+LV TGE+LDD+KTLA
Sbjct: 1   MAMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLA 60

Query: 331 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 462
           DQKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 103


>emb|CBI15587.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  172 bits (436), Expect = 6e-41
 Identities = 82/104 (78%), Positives = 94/104 (90%)
 Frame = +1

Query: 151 MAMYIRVKREKTTYFLQCDPTETVVDIKHKLFGLIDKPVSDQRLVLVATGEVLDDAKTLA 330
           MAMYIRVKR KTTYFLQCDPTET++D+K KL  LID+P++DQRL+LV TGE+LDD+KTLA
Sbjct: 72  MAMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLA 131

Query: 331 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 462
           DQKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 132 DQKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 174


>gb|ABK94223.1| unknown [Populus trichocarpa]
          Length = 103

 Score =  162 bits (411), Expect = 5e-38
 Identities = 79/104 (75%), Positives = 93/104 (89%)
 Frame = +1

Query: 151 MAMYIRVKREKTTYFLQCDPTETVVDIKHKLFGLIDKPVSDQRLVLVATGEVLDDAKTLA 330
           MAMYIRVKR KTTYF+QCDPTE  ++IK KL  LID+PV+DQRL+LV TGEVL+D+K+LA
Sbjct: 1   MAMYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLA 60

Query: 331 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 462
           +QKVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 61  EQKVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 103


>ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|222855339|gb|EEE92886.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  159 bits (402), Expect = 6e-37
 Identities = 77/102 (75%), Positives = 91/102 (89%)
 Frame = +1

Query: 157 MYIRVKREKTTYFLQCDPTETVVDIKHKLFGLIDKPVSDQRLVLVATGEVLDDAKTLADQ 336
           MYIRVKR KTTYF+QCDPTE  ++IK KL  LID+PV+DQRL+LV TGEVL+D+K+LA+Q
Sbjct: 1   MYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLAEQ 60

Query: 337 KVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 462
           KVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 61  KVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 101


>ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycine max]
           gi|255627435|gb|ACU14062.1| unknown [Glycine max]
          Length = 103

 Score =  153 bits (386), Expect = 4e-35
 Identities = 73/104 (70%), Positives = 91/104 (87%)
 Frame = +1

Query: 151 MAMYIRVKREKTTYFLQCDPTETVVDIKHKLFGLIDKPVSDQRLVLVATGEVLDDAKTLA 330
           M MYIRVKR KTTYF++C P++ ++DIK KL  L+D+P ++QRL+L  TGEVL+D+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLA 60

Query: 331 DQKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 462
           DQKVENDAVVALTLRKDDNEFEEV I++P +DFY +RDADGA+W
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEVNIVRP-NDFYQARDADGANW 103


Top