BLASTX nr result

ID: Coptis21_contig00009421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009421
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   249   8e-64
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   247   4e-63
ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [...   244   3e-62
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   243   8e-62
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...   239   9e-61

>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  249 bits (636), Expect = 8e-64
 Identities = 126/191 (65%), Positives = 157/191 (82%), Gaps = 4/191 (2%)
 Frame = +2

Query: 143 EDTGAEVAPIVQLEQVTVSTGEENEHVLLDLKAKIYRYDKQGKQWKERGVGNVKFLKHKD 322
           EDTGA+VAPIV+LE+V V+TGEE+E  +LDLKAK+YR+DK G QWKERG G+VK LKHK+
Sbjct: 21  EDTGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKE 80

Query: 323 SGKFRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFG 502
           SGK RLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF 
Sbjct: 81  SGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFA 140

Query: 503 SVENCKTFMQKFEGITDAVE--DENSEGSAAADLLERQLNINDGKTE-KAGEKVPVAADE 673
           SVENCK+FM+K + + ++ +  +EN + SAAA LLE+ L++ + +TE KA E+ PVAA E
Sbjct: 141 SVENCKSFMEKVQEVAESQQKKEENKDASAAAGLLEK-LSVEEKETEDKAEEEKPVAAKE 199

Query: 674 EK-PESEDGET 703
           EK  ESE G+T
Sbjct: 200 EKETESEQGKT 210


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
           unknown [Populus trichocarpa]
           gi|222845745|gb|EEE83292.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  247 bits (630), Expect = 4e-63
 Identities = 121/185 (65%), Positives = 152/185 (82%), Gaps = 3/185 (1%)
 Frame = +2

Query: 143 EDTGAEVAPIVQLEQVTVSTGEENEHVLLDLKAKIYRYDKQGKQWKERGVGNVKFLKHKD 322
           EDTGA+VAPIV+LE+V VSTGEE+E  +LDLK+K+YR+DK G QWKERG G VKFLKHK+
Sbjct: 22  EDTGAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKE 81

Query: 323 SGKFRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFG 502
           SGK RLVMRQSKTLKICANH ++P MSVQEH G+EKSCVWHA DF+D ELK ELFCIRF 
Sbjct: 82  SGKVRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFA 141

Query: 503 SVENCKTFMQKFEGITDAVE--DENSEGSAAADLLERQLNINDGKT-EKAGEKVPVAADE 673
           SVENCKTFM+ F+ + ++ +  +EN + +AAAD L++ L++ + KT EKA E+ P AA E
Sbjct: 142 SVENCKTFMEMFQEVAESQKSNEENKDATAAADALDK-LSVEEKKTEEKAVEESPTAAKE 200

Query: 674 EKPES 688
           E+ ++
Sbjct: 201 EETKT 205


>ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera]
           gi|296081117|emb|CBI18249.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  244 bits (623), Expect = 3e-62
 Identities = 122/192 (63%), Positives = 152/192 (79%), Gaps = 9/192 (4%)
 Frame = +2

Query: 143 EDTGAEVAPIVQLEQVTVSTGEENEHVLLDLKAKIYRYDKQGKQWKERGVGNVKFLKHKD 322
           EDTGA+VAPIV+LE V V+TGEE E  +LDLKAK+YR+DK+GKQWKERGVG VKFLKHK 
Sbjct: 20  EDTGAQVAPIVKLEVVAVTTGEEEEDAILDLKAKLYRFDKEGKQWKERGVGTVKFLKHKG 79

Query: 323 SGKFRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFG 502
           SGK RLVMRQSKTLKICANH ++P M+VQEH G++KSCVWHA DF+D ELK ELFCIRF 
Sbjct: 80  SGKVRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVWHATDFADGELKDELFCIRFA 139

Query: 503 SVENCKTFMQKFEGITDA--VEDENSEGSAAADLLERQLNINDGKTEKAGE-------KV 655
           SVENCKTFM+ F+ + ++   ++E+ + SAAA LLE+ L++ D KTE  G+       K 
Sbjct: 140 SVENCKTFMEMFQEVAESQGKKEESEDASAAAGLLEK-LSVGDSKTEDKGQEEGSLATKE 198

Query: 656 PVAADEEKPESE 691
            VA D+E+ ++E
Sbjct: 199 KVAVDKEEVQAE 210


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  243 bits (619), Expect = 8e-62
 Identities = 118/186 (63%), Positives = 149/186 (80%), Gaps = 3/186 (1%)
 Frame = +2

Query: 143 EDTGAEVAPIVQLEQVTVSTGEENEHVLLDLKAKIYRYDKQGKQWKERGVGNVKFLKHKD 322
           EDTGA+VAPIV+LE+V VSTGEE+E  +LDLK+K+YR+DK G QWKERG G VK LKHK+
Sbjct: 22  EDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKE 81

Query: 323 SGKFRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFG 502
           SGK RLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF 
Sbjct: 82  SGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFA 141

Query: 503 SVENCKTFMQKFEGITDAVE--DENSEGSAAADLLERQLNINDGKTEK-AGEKVPVAADE 673
           SVENCKTFM+ F+ + ++ E  +EN + + AAD LE+ L++   KTE+ AGE+ P A   
Sbjct: 142 SVENCKTFMEMFQEVAESQESKEENEDATVAADALEK-LSVEGKKTEENAGEEAPAATKN 200

Query: 674 EKPESE 691
           E+ +++
Sbjct: 201 EETKTD 206


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  239 bits (610), Expect = 9e-61
 Identities = 122/195 (62%), Positives = 149/195 (76%), Gaps = 6/195 (3%)
 Frame = +2

Query: 143 EDTGAEVAPIVQLEQVTVSTGEENEHVLLDLKAKIYRYDKQGKQWKERGVGNVKFLKHKD 322
           EDTGA+VAPIV+LE+V V+TGEE+E  +LDLKAK+YR+DK+G QWKERG G VK LKHK 
Sbjct: 21  EDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKAKMYRFDKEGNQWKERGAGTVKLLKHKQ 80

Query: 323 SGKFRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFG 502
           +GK RLVMRQSKTLKICANH I  GMSVQEH G+EKSC+WHA DFSD ELK ELFCIRF 
Sbjct: 81  TGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFA 140

Query: 503 SVENCKTFMQKFEGITDA--VEDENSEGSAAADLLER---QLNINDGKTEKAGEKVPVAA 667
           S+ENCKTFM+KF  I ++  V  E++EG  AA L+E    +   ND K ++A EK P   
Sbjct: 141 SIENCKTFMEKFTEIAESQQVGKESTEGDEAAGLIENLSVEEKKNDEKAKEAEEKEPAKE 200

Query: 668 DEE-KPESEDGETRS 709
           ++E K E E+ E ++
Sbjct: 201 EKEAKKEKEEEEKKT 215


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