BLASTX nr result

ID: Coptis21_contig00009357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009357
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509850.1| polygalacturonase, putative [Ricinus communi...   666   0.0  
ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [...   659   0.0  
ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|2...   653   0.0  
ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [...   649   0.0  
ref|XP_002513653.1| polygalacturonase, putative [Ricinus communi...   642   0.0  

>ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
            gi|223549749|gb|EEF51237.1| polygalacturonase, putative
            [Ricinus communis]
          Length = 480

 Score =  666 bits (1719), Expect = 0.0
 Identities = 316/478 (66%), Positives = 388/478 (81%), Gaps = 1/478 (0%)
 Frame = -1

Query: 1499 MDRSSTPAMFQTMEVVFVIVLLGLVSVGRVECRQAIKLNS-EYPAISCRKHSASLTEYGG 1323
            M+ S++P     M+ + V+ LL  +    V+ R+  KL   EY AISCR H ASL ++GG
Sbjct: 1    MELSTSPKTSLVMDTILVVGLLLCLCTNGVDSRKRPKLACFEYAAISCRAHEASLEDFGG 60

Query: 1322 IGDGKTSNTKAFKKAIDDLSKFSSDGGAQLIIPPGKWLTGSFNLTSHFTLYLQKDAIILA 1143
            +GDG+TSNTKAF+ AID LS+FS DGG+QL +PPGKWLTGSFNLTSHFTL+L KDA++LA
Sbjct: 61   VGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHFTLFLDKDAVLLA 120

Query: 1142 SQNAKDFPLIPVLPSYGRGRDAPGDGLRYSSFIHGTNLTDVIITGANGTIDGQGQNWWHR 963
            SQ+  ++P+I  LPSYGRGRD  G   RYSS I GTNLTDV+ITGANGTIDGQG  WW +
Sbjct: 121  SQDESEWPVIEPLPSYGRGRDTEGG--RYSSLIFGTNLTDVVITGANGTIDGQGDLWWKK 178

Query: 962  FRHNKLNYTRPTLIEILYSSHIQISNLTLLNSPQWFVHPVYSSNIIIQKLTILAPYDPVS 783
            F + ++NYTRP LIEI+YS++IQISNLTL+NSP W +HP YSSN+++Q +TILAP +  S
Sbjct: 179  FHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGITILAPVN--S 236

Query: 782  PNTDGINPDSSSNVLIEDCYIVSGDDCISLKSGWDQYGIKVGIPTQHVIIRRLTCISPDS 603
            PNTDGINPDS +N  IEDCYIVSGDDC+++KSGWD+YGI  G+PT+ ++IRRLTCISP S
Sbjct: 237  PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTS 296

Query: 602  ALIALGSEMSGGVQDIRIEDTVAINTESGIRIKTAIGRGGYVKDIFVRNVTMHTMKYVFW 423
            A IALGSEMSGG+QD+R ED   INTESG+RIKT++GRGGYVKDI+VR +TMHTMK+VFW
Sbjct: 297  AAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFW 356

Query: 422  MTGLYGQHPDNNTDPKALPVIQNINYNDIRAENVTMSANLAGMKGNQFTGICISNVNIGL 243
            MTG YG HPDNN DP A+PVI+NINY DI AENVTM+A L G+ G+ FTGICISNV IGL
Sbjct: 357  MTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGL 416

Query: 242  SAKPKELQWNCTDIAGFTSGVTPKPCALLPDKAAGKDFSCHFPTDRLPIEDVKMNTCS 69
            + KPK+LQWNCTDIAG +SGVTPKPC+LLP++   K   C+FP D LPIE++++  CS
Sbjct: 417  AQKPKKLQWNCTDIAGISSGVTPKPCSLLPEQEKEKIADCNFPEDSLPIENIEVKMCS 474


>ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 476

 Score =  659 bits (1701), Expect = 0.0
 Identities = 319/464 (68%), Positives = 382/464 (82%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1457 VVFVIVLLGLVSVGRVECRQAIKL-NSEYPAISCRKHSASLTEYGGIGDGKTSNTKAFKK 1281
            V+ ++++LG ++V   +CR A KL N EYPAI+CRKHSA LT++GG+GDGKTSNTKAF+ 
Sbjct: 15   VISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFQS 74

Query: 1280 AIDDLSKFSSDGGAQLIIPPGKWLTGSFNLTSHFTLYLQKDAIILASQNAKDFPLIPVLP 1101
            AI  LS+ +SDGGAQLI+PPGKWLTGSFNLTSHFTL+L KDA+ILASQ+  ++P +PVLP
Sbjct: 75   AISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQLPVLP 134

Query: 1100 SYGRGRDAPGDGLRYSSFIHGTNLTDVIITGANGTIDGQGQNWWHRFRHNKLNYTRPTLI 921
            SYGRGRDAPG   R+SS I GT+LTDV+ITG NGTIDGQG  WW +F  N+LN TRP +I
Sbjct: 135  SYGRGRDAPGG--RFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMI 192

Query: 920  EILYSSHIQISNLTLLNSPQWFVHPVYSSNIIIQKLTILAPYDPVSPNTDGINPDSSSNV 741
            EI+YS  IQISNLTL+NSP WFVHP+YSSNI I+ LTILAP D  SPNTDGI+PDS +N 
Sbjct: 193  EIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVD--SPNTDGIDPDSCTNT 250

Query: 740  LIEDCYIVSGDDCISLKSGWDQYGIKVGIPTQHVIIRRLTCISPDSALIALGSEMSGGVQ 561
             IEDCYIVSGDDC+++KSGWD+YGIK G PTQH++IRRLTCISPDSA+IALGSEMSGG+Q
Sbjct: 251  RIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQ 310

Query: 560  DIRIEDTVAINTESGIRIKTAIGRGGYVKDIFVRNVTMHTMKYVFWMTGLYGQHPDNNTD 381
            D+R+ED  AINT+S +RIKTA+GRGGYVKDIFV+ +T+ TMKYVFWMTG YG HPD   D
Sbjct: 311  DVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFD 370

Query: 380  PKALPVIQNINYNDIRAENVTMSANLAGMKGNQFTGICISNVNIGLSAKPKELQWNCTDI 201
            PKALP I  INY D+ A NVT SA L G+  + FTGICISNV+I +S + K+LQWNCTD+
Sbjct: 371  PKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDV 430

Query: 200  AGFTSGVTPKPCALLPDKAAGKDFSCHFPTDRLPIEDVKMNTCS 69
            AG TS VTP  C LLP+K  GK F C FP D+L IE+V++ TCS
Sbjct: 431  AGVTSNVTPNTCQLLPEK--GK-FDCPFPNDKLSIENVQLKTCS 471


>ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|222846769|gb|EEE84316.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  653 bits (1684), Expect = 0.0
 Identities = 311/460 (67%), Positives = 384/460 (83%), Gaps = 1/460 (0%)
 Frame = -1

Query: 1442 VLLGLVSVGRVECRQAIKLNS-EYPAISCRKHSASLTEYGGIGDGKTSNTKAFKKAIDDL 1266
            VL+   +VG VE R+++K +  EY A+SCR HSAS++++GG+GDG T+NTKAF+ AID L
Sbjct: 21   VLVLFYTVG-VESRKSVKWDYFEYAALSCRAHSASVSDFGGVGDGTTANTKAFQAAIDHL 79

Query: 1265 SKFSSDGGAQLIIPPGKWLTGSFNLTSHFTLYLQKDAIILASQNAKDFPLIPVLPSYGRG 1086
            S+FSS+GG+ L +PPG+WLTGSFNLTS+FTLYL KDA++LASQ+  ++PLI  LPSYGRG
Sbjct: 80   SQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRG 139

Query: 1085 RDAPGDGLRYSSFIHGTNLTDVIITGANGTIDGQGQNWWHRFRHNKLNYTRPTLIEILYS 906
            RDA  DG RYSS I G NLTDVIITGANGTIDGQG+ WW +FR  +LNYTRP LIEI++S
Sbjct: 140  RDA--DGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNYTRPYLIEIMFS 197

Query: 905  SHIQISNLTLLNSPQWFVHPVYSSNIIIQKLTILAPYDPVSPNTDGINPDSSSNVLIEDC 726
            ++IQISNLTL+NSP W VHPVY SN+++Q LTILAP    SPNTDGINPDS +N  IEDC
Sbjct: 198  TNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVR--SPNTDGINPDSCTNTRIEDC 255

Query: 725  YIVSGDDCISLKSGWDQYGIKVGIPTQHVIIRRLTCISPDSALIALGSEMSGGVQDIRIE 546
            YIVSGDDC+++KSGWD+YGI  G+PT+ ++IRRLTCISP SA+IALGSEMSGG++D+R E
Sbjct: 256  YIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIEDVRAE 315

Query: 545  DTVAINTESGIRIKTAIGRGGYVKDIFVRNVTMHTMKYVFWMTGLYGQHPDNNTDPKALP 366
            D  AI++ESG+RIKTA+GRGGYVKDI+VR +T+ TMK+VFWMTG YG HPDNN DP A+P
Sbjct: 316  DITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIP 375

Query: 365  VIQNINYNDIRAENVTMSANLAGMKGNQFTGICISNVNIGLSAKPKELQWNCTDIAGFTS 186
            VIQNINY D+ AENVTM+A L G+ G+ FTGICISNV IGL+   K+LQWNCTD+AG TS
Sbjct: 376  VIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQWNCTDVAGITS 435

Query: 185  GVTPKPCALLPDKAAGKDFSCHFPTDRLPIEDVKMNTCSY 66
             V PKPCALLPD+  GK   C+FP D LP+E++++ TCS+
Sbjct: 436  EVNPKPCALLPDQGPGKIGGCNFPEDSLPVENMEVQTCSF 475


>ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 475

 Score =  649 bits (1674), Expect = 0.0
 Identities = 315/468 (67%), Positives = 380/468 (81%), Gaps = 1/468 (0%)
 Frame = -1

Query: 1469 QTMEVVFVIVLLGLVSVGRVECRQAIKL-NSEYPAISCRKHSASLTEYGGIGDGKTSNTK 1293
            Q +  + ++++LG ++V  VEC+    L N+EY AI+CRKHSA LT++GG+GDGKTSNTK
Sbjct: 10   QVIGAISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGVGDGKTSNTK 69

Query: 1292 AFKKAIDDLSKFSSDGGAQLIIPPGKWLTGSFNLTSHFTLYLQKDAIILASQNAKDFPLI 1113
            AF+ AI  L +++SDGGAQLI+PPGKWLTG FNLTSHFTL+L KDA+ILASQ   ++P +
Sbjct: 70   AFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILASQVESEWPQL 129

Query: 1112 PVLPSYGRGRDAPGDGLRYSSFIHGTNLTDVIITGANGTIDGQGQNWWHRFRHNKLNYTR 933
            PVLPSYGRGRDAPG   R+SS I GT+LTDV+ITG NGTIDGQG  WW +F  N+LN TR
Sbjct: 130  PVLPSYGRGRDAPGG--RFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTR 187

Query: 932  PTLIEILYSSHIQISNLTLLNSPQWFVHPVYSSNIIIQKLTILAPYDPVSPNTDGINPDS 753
            P +IEI+YS  IQISNLTL+NSP WFVHP+YSSNI I+ LTILAP D  SPNTDGI+PDS
Sbjct: 188  PYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVD--SPNTDGIDPDS 245

Query: 752  SSNVLIEDCYIVSGDDCISLKSGWDQYGIKVGIPTQHVIIRRLTCISPDSALIALGSEMS 573
             +N  IEDCYIVSGDDC+++KSGWD+YGIK G PTQH++IRRLTCISPDSA+IALGSEMS
Sbjct: 246  CTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMS 305

Query: 572  GGVQDIRIEDTVAINTESGIRIKTAIGRGGYVKDIFVRNVTMHTMKYVFWMTGLYGQHPD 393
            GG+QD+R+ED  AINT+S +RIKTA+GRGGYVKDIFV+ +T+ TMKYVFWMTG YG HPD
Sbjct: 306  GGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPD 365

Query: 392  NNTDPKALPVIQNINYNDIRAENVTMSANLAGMKGNQFTGICISNVNIGLSAKPKELQWN 213
               DPKALP I  INY D+ A NVT SA L G+  + FTGICISNV+I +S + K+LQWN
Sbjct: 366  PAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWN 425

Query: 212  CTDIAGFTSGVTPKPCALLPDKAAGKDFSCHFPTDRLPIEDVKMNTCS 69
            CTD+AG TS VTP  C LLP+K  GK F C FP D+L IE+V++ TCS
Sbjct: 426  CTDVAGVTSNVTPNTCQLLPEK--GK-FDCPFPNDKLSIENVQLKTCS 470


>ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
            gi|223547561|gb|EEF49056.1| polygalacturonase, putative
            [Ricinus communis]
          Length = 473

 Score =  642 bits (1657), Expect = 0.0
 Identities = 318/478 (66%), Positives = 371/478 (77%), Gaps = 1/478 (0%)
 Frame = -1

Query: 1499 MDRSSTPAMFQTMEVVFVIVLLGLVSVGRVECRQAIKLNS-EYPAISCRKHSASLTEYGG 1323
            M+   T A     +V+ V+++LG +     ECR     N+  Y AISCRKHSA LT++GG
Sbjct: 1    MENYPTSAKHYIFKVIPVVLILGSLGSRLGECRNVKISNTISYSAISCRKHSAVLTDFGG 60

Query: 1322 IGDGKTSNTKAFKKAIDDLSKFSSDGGAQLIIPPGKWLTGSFNLTSHFTLYLQKDAIILA 1143
            +GDGKTSNTK F+ AI +LSK+S DGGAQLIIP GKWLTGSFNLTSHFTL+L K+A++LA
Sbjct: 61   VGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHKEAVLLA 120

Query: 1142 SQNAKDFPLIPVLPSYGRGRDAPGDGLRYSSFIHGTNLTDVIITGANGTIDGQGQNWWHR 963
            SQ+  ++P++P LPSYGRGRDA G   R+SS I GTNL DV+ITG NGTIDGQG  WW++
Sbjct: 121  SQDEAEWPILPPLPSYGRGRDATGG--RFSSLIFGTNLKDVVITGNNGTIDGQGATWWNK 178

Query: 962  FRHNKLNYTRPTLIEILYSSHIQISNLTLLNSPQWFVHPVYSSNIIIQKLTILAPYDPVS 783
            F    LN TRP LIE+LYS  IQISNL L+NSP W VHP YSSN++IQ LTILAP D  S
Sbjct: 179  FHKGLLNQTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVD--S 236

Query: 782  PNTDGINPDSSSNVLIEDCYIVSGDDCISLKSGWDQYGIKVGIPTQHVIIRRLTCISPDS 603
            PNTDGINPDS +N  IEDCYIVSGDDCI++KSGWDQYGIK G+PT+ ++IRRLTCISPDS
Sbjct: 237  PNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDS 296

Query: 602  ALIALGSEMSGGVQDIRIEDTVAINTESGIRIKTAIGRGGYVKDIFVRNVTMHTMKYVFW 423
            A IALGSEMSGG+QD+R ED  AINT+SGIRIKTA GRG YVKDIFVR +   TMKYVFW
Sbjct: 297  ATIALGSEMSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFW 356

Query: 422  MTGLYGQHPDNNTDPKALPVIQNINYNDIRAENVTMSANLAGMKGNQFTGICISNVNIGL 243
            MTG YG HPD   DP ALP+I  INY DI AENVT SA L G++ + FTGICISN NI L
Sbjct: 357  MTGSYGSHPDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITL 416

Query: 242  SAKPKELQWNCTDIAGFTSGVTPKPCALLPDKAAGKDFSCHFPTDRLPIEDVKMNTCS 69
            + KP++LQWNCTDI G TS V P+PC+LLP    GK   C FP DRLPIE+VK+ TCS
Sbjct: 417  TKKPEKLQWNCTDIEGVTSNVNPRPCSLLP----GKRLECPFPKDRLPIENVKLKTCS 470


Top