BLASTX nr result

ID: Coptis21_contig00009345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009345
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   354   4e-95
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   341   3e-91
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   340   8e-91
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   337   5e-90
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   335   3e-89

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  354 bits (908), Expect = 4e-95
 Identities = 174/260 (66%), Positives = 198/260 (76%), Gaps = 1/260 (0%)
 Frame = -1

Query: 1306 DTTYTKVFVGGLAWETQSETMRRYFDQFGDILEAVVITDRITGRSKGYGFVTFRDPEAAK 1127
            DTTYTKVFVGGLAWETQSETMRRYF+QFG+ILEAVVITD+ TGRSKGYGFVTFRDPE+A+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87

Query: 1126 RACLDPSPVIDGRRANCNLASLGRPRPPPPYGHLRAMTPYFASGQSPR-PYIGSPSYHQP 950
            RACLDP+P+IDGRRANCNLASLGRPRP   YG LR +TPY  S  + R  Y+G+  Y QP
Sbjct: 88   RACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQP 147

Query: 949  VTYNYQQGFAYPQYGYTAYGPDYVHPQVQQGVFNPYLGQQYLQIYGVPSSVNAAIYPYGQ 770
            V+Y+YQQGF YP YGY AYGP+YV+P   QGV+NPY GQQYLQIYGVP +VN AIYPYGQ
Sbjct: 148  VSYSYQQGFMYPSYGYAAYGPEYVYP---QGVYNPYPGQQYLQIYGVPGTVNTAIYPYGQ 204

Query: 769  SRQPLPSNQGYTAVHGYAMPGHHVVQFSGANVNALTAAHIPTNQAPYPAXXXXXXXXXXX 590
              Q LPS+ GYT V GYAMPGH  +QF G++VNA++ + IPT QAPYP            
Sbjct: 205  LGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTSPIPTIQAPYPT-GIAAPVPAQP 263

Query: 589  XXXXXXXXXXXXQGSGSDQT 530
                        QGSG DQT
Sbjct: 264  QFIVPAHSPQFIQGSGPDQT 283


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  341 bits (875), Expect = 3e-91
 Identities = 165/230 (71%), Positives = 186/230 (80%), Gaps = 3/230 (1%)
 Frame = -1

Query: 1306 DTTYTKVFVGGLAWETQSETMRRYFDQFGDILEAVVITDRITGRSKGYGFVTFRDPEAAK 1127
            DTTYTKVFVGGLAWETQSETMRRYF+QFGDILEAVVITD+ TGRSKGYGFVTFR+PEAA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAAR 87

Query: 1126 RACLDPSPVIDGRRANCNLASLGRPRPPPPY-GHLRAMTPYFASGQSPR-PYIGSPSYHQ 953
            RAC DP+P+IDGRRANCNLASLGRPRPP PY G LR   PY AS Q+PR  Y GS  Y Q
Sbjct: 88   RACADPTPMIDGRRANCNLASLGRPRPPQPYVGRLRPAPPYIASVQTPRGTYAGSFGYQQ 147

Query: 952  PVTYNYQQGFAYPQYGYTAYGPDYVHPQVQQGVFNPY-LGQQYLQIYGVPSSVNAAIYPY 776
            PV+Y YQQG  Y  YGY AYGP+YV+   QQGV+NPY  GQQYLQIYGVP +VN  +YPY
Sbjct: 148  PVSYGYQQGLMYHPYGYAAYGPEYVY---QQGVYNPYAAGQQYLQIYGVPGTVNTGMYPY 204

Query: 775  GQSRQPLPSNQGYTAVHGYAMPGHHVVQFSGANVNALTAAHIPTNQAPYP 626
            GQ  Q +P   GYT + GYA+PGHH++QF G  VNA+T + +PT QAPYP
Sbjct: 205  GQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNAMTTSPLPTIQAPYP 254


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  340 bits (871), Expect = 8e-91
 Identities = 167/262 (63%), Positives = 194/262 (74%), Gaps = 2/262 (0%)
 Frame = -1

Query: 1306 DTTYTKVFVGGLAWETQSETMRRYFDQFGDILEAVVITDRITGRSKGYGFVTFRDPEAAK 1127
            DTTYTKVFVGGLAWETQSETMRRYFDQFG+ILEAVVITD+ TGRSKGYGFVTFRDPEAA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAAR 87

Query: 1126 RACLDPSPVIDGRRANCNLASLGRPRPPPPYGHLRAMTPYFASGQSPR-PYIGSPSYHQP 950
            RAC DPSPVIDGRRANCNLASLGRPRPP PYG +R  +PY  S Q  R  Y+G   Y QP
Sbjct: 88   RACADPSPVIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGSLQPARGAYVGGFGYQQP 147

Query: 949  VTYNYQQGFAYPQYGYTAYGPDYVHPQVQQGVFNPYLGQQYLQIYGVPSSVN-AAIYPYG 773
            V+Y+YQQG  YP YGYT+YGP+Y++P   Q ++NPY+GQQYLQIYGVP +VN   IYPYG
Sbjct: 148  VSYSYQQGLVYPPYGYTSYGPEYIYP---QSLYNPYMGQQYLQIYGVPGAVNTTTIYPYG 204

Query: 772  QSRQPLPSNQGYTAVHGYAMPGHHVVQFSGANVNALTAAHIPTNQAPYPAXXXXXXXXXX 593
            Q  Q + S  GY+A+ GY +PGH +V + G+NVNA+T + +P  QA YP+          
Sbjct: 205  QVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPS-GIAAPVPGQ 263

Query: 592  XXXXXXXXXXXXXQGSGSDQTA 527
                         QGSG DQTA
Sbjct: 264  PQFIVPAPSPQFMQGSGPDQTA 285


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  337 bits (864), Expect = 5e-90
 Identities = 167/261 (63%), Positives = 192/261 (73%), Gaps = 2/261 (0%)
 Frame = -1

Query: 1306 DTTYTKVFVGGLAWETQSETMRRYFDQFGDILEAVVITDRITGRSKGYGFVTFRDPEAAK 1127
            DTTYTKVFVGGLAWETQSETMRRYF+QFGDILEAVVITD+ TGRSKGYGFVTFR+P+AA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPDAAR 87

Query: 1126 RACLDPSPVIDGRRANCNLASLGRPRPPPPYGHLRAMTPYFASGQSPR-PYIGSPSYHQP 950
            RAC DP+P+IDGRRANCNLASLGRPRPP PYG  R   PY  S Q+PR  Y+GS  Y QP
Sbjct: 88   RACADPTPIIDGRRANCNLASLGRPRPPLPYGRPRPAAPYITSVQTPRGTYVGSFGYQQP 147

Query: 949  VTYNYQQGFAYPQYGYTAYGPDYVHPQVQQGVFNPY-LGQQYLQIYGVPSSVNAAIYPYG 773
            V+Y YQQG  Y  YGY AYGP+YV+   QQG +NPY  G QYLQIYGVP +VN+ +YPYG
Sbjct: 148  VSYGYQQGLMYNPYGYAAYGPEYVY---QQGAYNPYATGHQYLQIYGVPGTVNSGMYPYG 204

Query: 772  QSRQPLPSNQGYTAVHGYAMPGHHVVQFSGANVNALTAAHIPTNQAPYPAXXXXXXXXXX 593
            Q  Q +P   GYT++ GYA+PGH +VQF G +VNA+T + +PT QAPY            
Sbjct: 205  QLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAITTSSMPTIQAPYHT-GIAAAVPAQ 263

Query: 592  XXXXXXXXXXXXXQGSGSDQT 530
                         QGSGSDQT
Sbjct: 264  SQFIVPAPSPQYMQGSGSDQT 284


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  335 bits (858), Expect = 3e-89
 Identities = 166/269 (61%), Positives = 194/269 (72%), Gaps = 9/269 (3%)
 Frame = -1

Query: 1306 DTTYTKVFVGGLAWETQSETMRRYFDQFGDILEAVVITDRITGRSKGYGFVTFRDPEAAK 1127
            DTTYTKVFVGGLAWETQSETMRRYFDQFG+ILEAVVITD+ TGRSKGYGFVTFRDPEAA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAAR 87

Query: 1126 RACLDPSPVIDGRRANCNLASLGRPRPPPPYG-------HLRAMTPYFASGQSPR-PYIG 971
            RAC DP+PVIDGRRANCNLASLGRPRPP PYG        +R  +PY  S Q  R  Y+G
Sbjct: 88   RACADPTPVIDGRRANCNLASLGRPRPPLPYGIVLCLIRRIRPASPYVGSLQPARGAYVG 147

Query: 970  SPSY-HQPVTYNYQQGFAYPQYGYTAYGPDYVHPQVQQGVFNPYLGQQYLQIYGVPSSVN 794
               Y  QPV+Y+YQQG  YP YGYT YGP+Y++P   Q ++NPY+GQQYLQIYGVP +VN
Sbjct: 148  GFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYP---QSLYNPYMGQQYLQIYGVPGAVN 204

Query: 793  AAIYPYGQSRQPLPSNQGYTAVHGYAMPGHHVVQFSGANVNALTAAHIPTNQAPYPAXXX 614
              +YPYGQ  Q +PS  GY+A+ GY +PGH +V + G+NVNA+T + +P  QA YP+   
Sbjct: 205  TTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPS-GI 263

Query: 613  XXXXXXXXXXXXXXXXXXXXQGSGSDQTA 527
                                QGSG DQTA
Sbjct: 264  AAPVPGQPQFIVPAHSPQFMQGSGPDQTA 292


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