BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009329
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]             159   5e-37
ref|NP_180567.1| Ran-binding protein 1-b [Arabidopsis thaliana] ...   159   5e-37
ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arab...   158   9e-37
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]                      157   1e-36

>gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]
          Length = 217

 Score =  159 bits (402), Expect = 5e-37
 Identities = 89/197 (45%), Positives = 117/197 (59%), Gaps = 9/197 (4%)
 Frame = +2

Query: 20  NRAENAGAEVEHII--------TGEEDEDVLLQMRSKLYEFERKGDQWKELCVGTVKLLK 175
           N  E+ GA+V  I+        TGEEDED +L ++SKLY F++ G QWKE   GTVK LK
Sbjct: 21  NEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLK 80

Query: 176 HKLTGKVRLVMR-SKSLNIYANIQISSRMFVDVHASNSKSCVWSANDFSDNVLKENRFCI 352
           H+++GK+RLVMR SK+L I AN  + S M V  HA N KSCVW A DFSD  LK+  FCI
Sbjct: 81  HRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCI 140

Query: 353 QFSSTKNCNTFMQLFRESIDSEEKEEKYVAKQLERQLKLGDTKIENVGERVPITGIEKQR 532
           +F+S +NC  FMQ F+E  +SEE++E+         L    T  E   E+ P+   E+ +
Sbjct: 141 RFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKESEKKPVEKAEENK 200

Query: 533 VIEDGKSKTALEEAPVA 583
             E  + K   E  P A
Sbjct: 201 KSEAVEEKKTEESVPSA 217


>ref|NP_180567.1| Ran-binding protein 1-b [Arabidopsis thaliana]
           gi|76789667|sp|Q8RWG8.2|RBP1B_ARATH RecName:
           Full=Ran-binding protein 1 homolog b
           gi|3150414|gb|AAC16966.1| Ran binding protein
           (AtRanBP1b) [Arabidopsis thaliana]
           gi|20197228|gb|AAM14982.1| Ran binding protein
           (AtRanBP1b) [Arabidopsis thaliana]
           gi|56236138|gb|AAV84525.1| At2g30060 [Arabidopsis
           thaliana] gi|57222134|gb|AAW38974.1| At2g30060
           [Arabidopsis thaliana] gi|88196725|gb|ABD43005.1|
           At2g30060 [Arabidopsis thaliana]
           gi|330253246|gb|AEC08340.1| Ran-binding protein 1-b
           [Arabidopsis thaliana]
          Length = 217

 Score =  159 bits (402), Expect = 5e-37
 Identities = 89/197 (45%), Positives = 117/197 (59%), Gaps = 9/197 (4%)
 Frame = +2

Query: 20  NRAENAGAEVEHII--------TGEEDEDVLLQMRSKLYEFERKGDQWKELCVGTVKLLK 175
           N  E+ GA+V  I+        TGEEDED +L ++SKLY F++ G QWKE   GTVK LK
Sbjct: 21  NEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLK 80

Query: 176 HKLTGKVRLVMR-SKSLNIYANIQISSRMFVDVHASNSKSCVWSANDFSDNVLKENRFCI 352
           H+++GK+RLVMR SK+L I AN  + S M V  HA N KSCVW A DFSD  LK+  FCI
Sbjct: 81  HRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCI 140

Query: 353 QFSSTKNCNTFMQLFRESIDSEEKEEKYVAKQLERQLKLGDTKIENVGERVPITGIEKQR 532
           +F+S +NC  FMQ F+E  +SEE++E+         L    T  E   E+ P+   E+ +
Sbjct: 141 RFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKESEKKPVEKAEENK 200

Query: 533 VIEDGKSKTALEEAPVA 583
             E  + K   E  P A
Sbjct: 201 KSEAVEEKKTEESVPSA 217


>ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arabidopsis lyrata subsp.
            lyrata] gi|297338225|gb|EFH68642.1| hypothetical protein
            ARALYDRAFT_334013 [Arabidopsis lyrata subsp. lyrata]
          Length = 705

 Score =  158 bits (400), Expect = 9e-37
 Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 13/194 (6%)
 Frame = +2

Query: 20   NRAENAGAEVEHII--------TGEEDEDVLLQMRSKLYEFERKGDQWKELCVGTVKLLK 175
            N  E+ GA+V  I+        TGEEDED +L ++SKLY F++  +QWKE   GTVKLLK
Sbjct: 496  NEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKLLK 555

Query: 176  HKLTGKVRLVMR-SKSLNIYANIQISSRMFVDVHASNSKSCVWSANDFSDNVLKENRFCI 352
            HK TGK+RLVMR SK+L I AN  + S M V  H  N KSCVW A DF+D  LK+  FCI
Sbjct: 556  HKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCI 615

Query: 353  QFSSTKNCNTFMQLFRESIDS-EEKEEKYVAKQ---LERQLKLGDTKIENVGERVPITGI 520
            +F+S +NC TFMQ F+E  DS EEKEE   A     L  +L + +TK E   E   +  +
Sbjct: 616  RFASIENCKTFMQKFKEVADSEEEKEESKDASDTAGLLEKLTVEETKTEEKTEAKAVETV 675

Query: 521  EKQRVIEDGKSKTA 562
            + +   E+ K   A
Sbjct: 676  KTEVKAEEKKESEA 689


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  158 bits (399), Expect = 1e-36
 Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 14/174 (8%)
 Frame = +2

Query: 29  ENAGAEVEHII--------TGEEDEDVLLQMRSKLYEFERKGDQWKELCVGTVKLLKHKL 184
           E+ GA+V  I+        TGEEDED +L ++SKLY F++ G+QWKE   GTVKLLKHK 
Sbjct: 22  EDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKE 81

Query: 185 TGKVRLVMR-SKSLNIYANIQISSRMFVDVHASNSKSCVWSANDFSDNVLKENRFCIQFS 361
           +GKVRLVMR SK+L I AN  +   M V  HA N KSCVW A DF+D  LK+  FCI+F+
Sbjct: 82  SGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFA 141

Query: 362 STKNCNTFMQLFRESIDSEEKEEK-----YVAKQLERQLKLGDTKIENVGERVP 508
           S +NC TFM++F+E  +S+E +E+       A  LE+    G    EN GE  P
Sbjct: 142 SVENCKTFMEMFQEVAESQESKEENEDATVAADALEKLSVEGKKTEENAGEEAP 195


>emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]
          Length = 217

 Score =  157 bits (398), Expect = 1e-36
 Identities = 88/197 (44%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
 Frame = +2

Query: 20  NRAENAGAEVEHII--------TGEEDEDVLLQMRSKLYEFERKGDQWKELCVGTVKLLK 175
           N  E+ GA+V  I+        TGEEDED +L ++SKLY F++ G QWKE   GTVK +K
Sbjct: 21  NEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFVK 80

Query: 176 HKLTGKVRLVMR-SKSLNIYANIQISSRMFVDVHASNSKSCVWSANDFSDNVLKENRFCI 352
           H+++GK+RLVMR SK+L I AN  + S M V  HA N KSCVW A DFSD  LK+  FCI
Sbjct: 81  HRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCI 140

Query: 353 QFSSTKNCNTFMQLFRESIDSEEKEEKYVAKQLERQLKLGDTKIENVGERVPITGIEKQR 532
           +F S +NC  FMQ F+E  +SEE++E+         L    T  E   E+ P+   E+ +
Sbjct: 141 RFGSVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKESEKKPVEKAEENK 200

Query: 533 VIEDGKSKTALEEAPVA 583
             E  + K   E  P A
Sbjct: 201 KSEAVEEKKTEESVPSA 217