BLASTX nr result

ID: Coptis21_contig00009229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009229
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266...   104   8e-21
emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]   104   8e-21
emb|CBI23686.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002315576.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
          Length = 895

 Score =  104 bits (259), Expect = 8e-21
 Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = -1

Query: 350 MSRSSRQKEKYGNGDEHSGATVHDGTAARTRPFSFDEIMIRRKNKKVSADGKDQARDPGN 171
           MSRS+R KEKYG   E       +GTAARTRPFSFDEIM+RRKNKK+  D KD A + GN
Sbjct: 1   MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGN 60

Query: 170 LSGQDTVETFSDHLENDRGNRRGKDSAYVVEKKASEDTTKRSFR-KEEATALKESS 6
           +S +D V+  SD  E+D+G +  +DS       +SED  K S R K+E T++KE +
Sbjct: 61  ISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGN 116


>emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
          Length = 544

 Score =  104 bits (259), Expect = 8e-21
 Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = -1

Query: 350 MSRSSRQKEKYGNGDEHSGATVHDGTAARTRPFSFDEIMIRRKNKKVSADGKDQARDPGN 171
           MSRS+R KEKYG   E       +GTAARTRPFSFDEIM+RRKNKK+  D KD A + GN
Sbjct: 1   MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGN 60

Query: 170 LSGQDTVETFSDHLENDRGNRRGKDSAYVVEKKASEDTTKRSFR-KEEATALKESS 6
           +S +D V+  SD  E+D+G +  +DS       +SED  K S R K+E T++KE +
Sbjct: 61  ISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGN 116


>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -1

Query: 281 DGTAARTRPFSFDEIMIRRKNKKVSADGKDQARDPGNLSGQDTVETFSDHLENDRGNRRG 102
           +GTAARTRPFSFDEIM+RRKNKK+  D KD A + GN+S +D V+  SD  E+D+G +  
Sbjct: 55  EGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKGYKHN 114

Query: 101 KDSAYVVEKKASEDTTKRSFR-KEEATALKESS 6
           +DS       +SED  K S R K+E T++KE +
Sbjct: 115 EDSFPGAINHSSEDFVKVSSRKKDENTSMKEGN 147


>ref|XP_002315576.1| predicted protein [Populus trichocarpa] gi|222864616|gb|EEF01747.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/107 (46%), Positives = 67/107 (62%)
 Frame = -1

Query: 350 MSRSSRQKEKYGNGDEHSGATVHDGTAARTRPFSFDEIMIRRKNKKVSADGKDQARDPGN 171
           MSRSSR K+KYG   E S    ++GTAARTRPFSFDEIM  RKNKK S   + + +D   
Sbjct: 2   MSRSSRHKDKYGRSSEMSQDHQYEGTAARTRPFSFDEIMSIRKNKKASEILEGELKD--- 58

Query: 170 LSGQDTVETFSDHLENDRGNRRGKDSAYVVEKKASEDTTKRSFRKEE 30
           + G    E  SDH  ++RGN   ++S+  + +  SE+  K S+RK+E
Sbjct: 59  ILGGVINEKASDH-RSERGNGHNEESSTGLRQHLSEEHGKASYRKKE 104


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