BLASTX nr result

ID: Coptis21_contig00009162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009162
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   174   1e-41
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              159   4e-37
ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like...   150   2e-34
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   148   1e-33
ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago trun...   145   6e-33

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
            vinifera]
          Length = 893

 Score =  174 bits (441), Expect = 1e-41
 Identities = 88/150 (58%), Positives = 111/150 (74%), Gaps = 2/150 (1%)
 Frame = -3

Query: 621  RLREKPNFRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKV*TQAKFPEPT 442
            R  +KPN RML+SRIREQF KF A+D LWW+GLAR++ED+G+IR+G+D++  Q KFP+PT
Sbjct: 744  RFMDKPNLRMLVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPT 803

Query: 441  ELGLNFLRSGIEDSFLVYPEADMLLSLQK-KSYSTFSDWGKGWADPEIXXXXXXXXXXXR 265
            +LGL FL+S  E +F VYP+ADMLLS +  KSYSTFS+WGKGWADPEI           R
Sbjct: 804  KLGLEFLQSTTEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQR 863

Query: 264  NTGKCPSRR-QPDLGTVRGRLAEKLSTKKR 178
               K  SR+ QP++ T RGRLA KL  +KR
Sbjct: 864  KPRKRKSRKHQPNMKTARGRLAAKLLIQKR 893


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  159 bits (402), Expect = 4e-37
 Identities = 79/138 (57%), Positives = 102/138 (73%), Gaps = 2/138 (1%)
 Frame = -3

Query: 621  RLREKPNFRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKV*TQAKFPEPT 442
            R  +KPN RML+SRIREQF KF A+D LWW+GLAR++ED+G+IR+G+D++  Q KFP+PT
Sbjct: 703  RFMDKPNLRMLVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPT 762

Query: 441  ELGLNFLRSGIEDSFLVYPEADMLLSLQK-KSYSTFSDWGKGWADPEIXXXXXXXXXXXR 265
            +LGL FL+S  E +F VYP+ADMLLS +  KSYSTFS+WGKGWADPEI           R
Sbjct: 763  KLGLEFLQSTTEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQR 822

Query: 264  NTGKCPSRR-QPDLGTVR 214
               K  SR+ QP++ T +
Sbjct: 823  KPRKRKSRKHQPNMKTAQ 840


>ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Glycine max]
          Length = 854

 Score =  150 bits (379), Expect = 2e-34
 Identities = 80/157 (50%), Positives = 103/157 (65%), Gaps = 11/157 (7%)
 Frame = -3

Query: 618  LREKPNFRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKV*TQAKFPEPTE 439
            LRE+PN ++L+ +IR+QF KF+ +D LWW+GLAR+LE +G+I +GDDK   QAK+ EPTE
Sbjct: 698  LRERPNLQILVGKIRQQFQKFLTTDILWWRGLARILEVKGYIGEGDDKTHVQAKYLEPTE 757

Query: 438  LGLNFLRSGIEDSFLVYPEADMLLSLQ-KKSYSTFSDWGKGWADPEIXXXXXXXXXXXRN 262
            LGL F++S  E  F VYPEADMLL+ +  K +S+FS+WGKGWADPEI           R 
Sbjct: 758  LGLEFVKSMSEQDFYVYPEADMLLARKTNKPFSSFSEWGKGWADPEIRRERLERMRVNRK 817

Query: 261  TGKCPSRRQ----------PDLGTVRGRLAEKLSTKK 181
             G  PS ++            L T RGRLA KLS  K
Sbjct: 818  PGMLPSPKKQRKRKARKGWAGLRTSRGRLAAKLSKHK 854


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi|223548380|gb|EEF49871.1|
            DNA helicase, putative [Ricinus communis]
          Length = 803

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/152 (47%), Positives = 100/152 (65%), Gaps = 8/152 (5%)
 Frame = -3

Query: 612  EKPNFRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKV*TQAKFPEPTELG 433
            ++PN RM +S++REQ  KF   D LWW+GL R++E +G+IR+GDDK+  Q KFPEPT+LG
Sbjct: 652  QRPNLRMFVSKLREQSQKFWGKDFLWWRGLVRIMEGKGYIREGDDKIHVQIKFPEPTKLG 711

Query: 432  LNFLRSGIEDSFLVYPEADMLLSL-QKKSYSTFSDWGKGWADPEI-------XXXXXXXX 277
            + FL    +  F +YPEADMLL++ Q+KSYSTF+DWGKGWADPEI               
Sbjct: 712  MEFLEYERDQPFYIYPEADMLLAMNQRKSYSTFADWGKGWADPEIRRQRLERKRKERKPR 771

Query: 276  XXXRNTGKCPSRRQPDLGTVRGRLAEKLSTKK 181
               ++  +  S+ + D+ T RGR+  KL  +K
Sbjct: 772  KQRQSRSRKSSKPKADMKTARGRITAKLFKQK 803


>ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago truncatula]
            gi|355480187|gb|AES61390.1| ATP-dependent DNA helicase Q4
            [Medicago truncatula]
          Length = 903

 Score =  145 bits (366), Expect = 6e-33
 Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 11/157 (7%)
 Frame = -3

Query: 621  RLREKPNFRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKV*TQAKFPEPT 442
            RL E+P+   L+  IREQF KF+ +D LWW+GL R+LE +G+IR+GDDK   Q K+P+ T
Sbjct: 747  RLGERPSLTTLVRSIREQFQKFLTTDILWWRGLTRILEAKGYIREGDDKTNVQIKYPDLT 806

Query: 441  ELGLNFLRSGIEDSFLVYPEADMLLSLQ-KKSYSTFSDWGKGWADPEIXXXXXXXXXXXR 265
            ELGL F++S  E++F VYPEADMLL  +  K +S+FS+WGKGWADPEI           R
Sbjct: 807  ELGLEFVKSITEETFYVYPEADMLLETKTDKPFSSFSEWGKGWADPEIRRQRLERMQVDR 866

Query: 264  NTGKCPSRR----------QPDLGTVRGRLAEKLSTK 184
            +  K  + R          +PDL T RGRL+ KLS K
Sbjct: 867  SPMKRQNPRKQRKRRVRKTKPDLRTSRGRLSAKLSKK 903


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